RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 ACAD9Q9H845 621 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 ADGRA3Q8IWK6 1321 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 IGSF9BQ9UPX0 1349 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 BTBD19C9JJ37 291 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 IGHA2P01877 340 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 H2AFZP0C0S5 128 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 ADSSP30520 456 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 GUCY2FP51841 1108 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 CAP1Q01518 475 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 MTA1Q13330 715 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 TMEM63BQ5T3F8 832 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 H2AFVQ71UI9 128 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 ZC3H3Q8IXZ2 948 aaKnown RBP10.77□□□□□ -0.69
USP11-201ENST00000218348 MSANTD4Q8NCY6 345 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 PPP1R13LQ8WUF5 828 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 IQCDQ96DY2 449 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 BTBD7Q9P203 1132 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 SEL1LQ9UBV2 794 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 SLC9A2Q9UBY0 812 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 SLC16A3O15427 465 aaKnown RBP10.76□□□□□ -0.69
USP11-201ENST00000218348 CYP26A1O43174 497 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 BCRP11274 1271 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 SOX5P35711 763 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 HDXQ7Z353 690 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 VPS36Q86VN1 386 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 CPNE8Q86YQ8 564 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 ARHGEF26Q96DR7 871 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 TRIM31Q9BZY9 425 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 APEX2Q9UBZ4 518 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 L1RE1Q9UN81 338 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 FAN1Q9Y2M0 1017 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 DOCK5Q9H7D0 1870 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 ANO9A1A5B4 782 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 LCA5LO95447 670 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 KRT5P13647 590 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 MXI1P50539 228 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 SMTNP53814 917 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 POLGP54098 1239 aaPredicted RBP10.76□□□□□ -0.69
USP11-201ENST00000218348 KRT76Q01546 638 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 RPS6KA1Q15418 735 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 SNRNP35Q16560 246 aaKnown RBP10.76□□□□□ -0.69
USP11-201ENST00000218348 C8orf74Q6P047 294 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 SEMA4DQ92854 862 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 BTBD6Q96KE9 485 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 EDEM3Q9BZQ6 932 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 THAP2Q9H0W7 228 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 CSDE1O75534 798 aaKnown RBP10.76□□□□□ -0.69
USP11-201ENST00000218348 KCNA2P16389 499 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 GUCY2DQ02846 1103 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 SNAPC2Q13487 334 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 TUBB2AQ13885 445 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 LY6KQ17RY6 165 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 AADACL2Q6P093 401 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 PEX26Q7Z412 305 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 TXLNBQ8N3L3 684 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 SLC30A5Q8TAD4 765 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 TUBB2BQ9BVA1 445 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 POLR3FQ9H1D9 316 aaPredicted RBP10.76□□□□□ -0.69
USP11-201ENST00000218348 TXNRD2Q9NNW7 524 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 TBX20Q9UMR3 447 aa10.76□□□□□ -0.69
USP11-201ENST00000218348 PPP1R37O75864 691 aa10.75□□□□□ -0.69
USP11-201ENST00000218348 SGPL1O95470 568 aa10.75□□□□□ -0.69
USP11-201ENST00000218348 TCP1P17987 556 aaKnown RBP10.75□□□□□ -0.69
USP11-201ENST00000218348 GTF2A2P52657 109 aa10.75□□□□□ -0.69
USP11-201ENST00000218348 HTRA3P83110 453 aa10.75□□□□□ -0.69
USP11-201ENST00000218348 C11orf91Q3C1V1 193 aa10.75□□□□□ -0.69
USP11-201ENST00000218348 GJC2Q5T442 439 aaPredicted RBP10.75□□□□□ -0.69
USP11-201ENST00000218348 SCARA3Q6AZY7 606 aa10.75□□□□□ -0.69
USP11-201ENST00000218348 DDX42Q86XP3 938 aaKnown RBP eCLIP10.75□□□□□ -0.69
USP11-201ENST00000218348 TAS1R2Q8TE23 839 aa10.75□□□□□ -0.69
USP11-201ENST00000218348 SLC10A4Q96EP9 437 aa10.75□□□□□ -0.69
USP11-201ENST00000218348 TMEM117Q9H0C3 514 aa10.75□□□□□ -0.69
USP11-201ENST00000218348 DMAC2Q9NW81 257 aa10.75□□□□□ -0.69
USP11-201ENST00000218348 CPSF2Q9P2I0 782 aaKnown RBP10.75□□□□□ -0.69
USP11-201ENST00000218348 PFASO15067 1338 aa10.75□□□□□ -0.69
USP11-201ENST00000218348 PJA2O43164 708 aa10.75□□□□□ -0.69
USP11-201ENST00000218348 AP1G2O75843 785 aa10.75□□□□□ -0.69
USP11-201ENST00000218348 GJB1P08034 283 aa10.75□□□□□ -0.69
USP11-201ENST00000218348 JAK3P52333 1124 aa10.75□□□□□ -0.69
USP11-201ENST00000218348 DRP2Q13474 957 aa10.75□□□□□ -0.69
USP11-201ENST00000218348 SPOPLQ6IQ16 392 aa10.75□□□□□ -0.69
USP11-201ENST00000218348 C4orf19Q8IY42 314 aa10.75□□□□□ -0.69
USP11-201ENST00000218348 TMEM161BQ8NDZ6 487 aa10.75□□□□□ -0.69
USP11-201ENST00000218348 TATDN2Q93075 761 aa10.75□□□□□ -0.69
USP11-201ENST00000218348 DDX47Q9H0S4 455 aaKnown RBP10.75□□□□□ -0.69
USP11-201ENST00000218348 EPB41L5Q9HCM4 733 aa10.75□□□□□ -0.69
USP11-201ENST00000218348 HOXC10Q9NYD6 342 aa10.75□□□□□ -0.69
USP11-201ENST00000218348 RAB21Q9UL25 225 aa10.75□□□□□ -0.69
USP11-201ENST00000218348 SLC26A4O43511 780 aa10.74□□□□□ -0.69
USP11-201ENST00000218348 GLI1P08151 1106 aa10.74□□□□□ -0.69
USP11-201ENST00000218348 ITGA4P13612 1032 aa10.74□□□□□ -0.69
USP11-201ENST00000218348 TNNI1P19237 187 aa10.74□□□□□ -0.69
USP11-201ENST00000218348 LMAN1P49257 510 aa10.74□□□□□ -0.69
USP11-201ENST00000218348 OSTNP61366 133 aa10.74□□□□□ -0.69
USP11-201ENST00000218348 CFAP221Q4G0U5 840 aa10.74□□□□□ -0.69
USP11-201ENST00000218348 ZBTB41Q5SVQ8 909 aa10.74□□□□□ -0.69
USP11-201ENST00000218348 CCDC70Q6NSX1 233 aa10.74□□□□□ -0.69
USP11-201ENST00000218348 LLGL2Q6P1M3 1020 aa10.74□□□□□ -0.69
USP11-201ENST00000218348 ZBTB33Q86T24 672 aa10.74□□□□□ -0.69
USP11-201ENST00000218348 SLC47A2Q86VL8 602 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms