RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 ATG4AQ8WYN0 398 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 CCDC127Q96BQ5 260 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 TBC1D31Q96DN5 1066 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 ZNF577Q9BSK1 485 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 GJA3Q9Y6H8 435 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 ANKRD62A6NC57 917 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 MAP2K1Q02750 393 aaPredicted RBP17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 ERMARDQ5T6L9 678 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 MOXD1Q6UVY6 613 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 CCDC105Q8IYK2 499 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 NEK9Q8TD19 979 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 CHMP6Q96FZ7 201 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 ZNF341Q9BYN7 854 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 RAB17Q9H0T7 212 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 TOPORSQ9NS56 1045 aaPredicted RBP17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 USP20Q9Y2K6 914 aa17.04■□□□□ 0.32
SNAPC1-201ENST00000216294 ZNFX1Q9P2E3 1918 aaKnown RBP17.03■□□□□ 0.32
SNAPC1-201ENST00000216294 VIMP08670 466 aaKnown RBP17.03■□□□□ 0.32
SNAPC1-201ENST00000216294 GMPSP49915 693 aaPredicted RBP17.03■□□□□ 0.32
SNAPC1-201ENST00000216294 SMTNP53814 917 aa17.03■□□□□ 0.32
SNAPC1-201ENST00000216294 NPEPPSP55786 919 aa17.03■□□□□ 0.32
SNAPC1-201ENST00000216294 SOX10P56693 466 aa17.03■□□□□ 0.32
SNAPC1-201ENST00000216294 C1orf220Q5T0J3 134 aa17.03■□□□□ 0.32
SNAPC1-201ENST00000216294 TAX1BP1Q86VP1 789 aa17.03■□□□□ 0.32
SNAPC1-201ENST00000216294 MICALL2Q8IY33 904 aa17.03■□□□□ 0.32
SNAPC1-201ENST00000216294 PPM1KQ8N3J5 372 aa17.03■□□□□ 0.32
SNAPC1-201ENST00000216294 SAAL1Q96ER3 474 aa17.03■□□□□ 0.32
SNAPC1-201ENST00000216294 CARD9Q9H257 536 aa17.03■□□□□ 0.32
SNAPC1-201ENST00000216294 PABPC3Q9H361 631 aaKnown RBP17.03■□□□□ 0.32
SNAPC1-201ENST00000216294 FER1L6Q2WGJ9 1857 aa17.03■□□□□ 0.32
SNAPC1-201ENST00000216294 GTPBP10A4D1E9 387 aaKnown RBP17.03■□□□□ 0.32
SNAPC1-201ENST00000216294 RGS16O15492 202 aaPredicted RBP17.03■□□□□ 0.32
SNAPC1-201ENST00000216294 FOSP01100 380 aaPredicted RBP17.03■□□□□ 0.32
SNAPC1-201ENST00000216294 CHRNB2P17787 502 aa17.03■□□□□ 0.32
SNAPC1-201ENST00000216294 CIITAP33076 1130 aa17.03■□□□□ 0.32
SNAPC1-201ENST00000216294 SPATS2Q86XZ4 545 aaKnown RBP17.03■□□□□ 0.32
SNAPC1-201ENST00000216294 ATXN2LQ8WWM7 1075 aaKnown RBP17.03■□□□□ 0.32
SNAPC1-201ENST00000216294 TEPSINQ96N21 525 aa17.03■□□□□ 0.32
SNAPC1-201ENST00000216294 RANBP17Q9H2T7 1088 aaKnown RBP17.03■□□□□ 0.32
SNAPC1-201ENST00000216294 TPX2Q9ULW0 747 aaKnown RBP17.03■□□□□ 0.32
SNAPC1-201ENST00000216294 GOLGA6L10A0A0M3HER8 536 aa17.02■□□□□ 0.32
SNAPC1-201ENST00000216294 ASNSP08243 561 aa17.02■□□□□ 0.32
SNAPC1-201ENST00000216294 GAP43P17677 238 aa17.02■□□□□ 0.32
SNAPC1-201ENST00000216294 ZNF280AP59817 542 aaPredicted RBP17.02■□□□□ 0.32
SNAPC1-201ENST00000216294 IL31RAQ8NI17 732 aa17.02■□□□□ 0.32
SNAPC1-201ENST00000216294 CHURC1Q8WUH1 139 aa17.02■□□□□ 0.32
SNAPC1-201ENST00000216294 CCT6BQ92526 530 aa17.02■□□□□ 0.32
SNAPC1-201ENST00000216294 HERPUD2Q9BSE4 406 aa17.02■□□□□ 0.32
SNAPC1-201ENST00000216294 FAM129AQ9BZQ8 928 aa17.02■□□□□ 0.32
SNAPC1-201ENST00000216294 DMAC2Q9NW81 257 aa17.02■□□□□ 0.32
SNAPC1-201ENST00000216294 INTUQ9ULD6 942 aa17.02■□□□□ 0.32
SNAPC1-201ENST00000216294 CLDN3O15551 220 aa17.02■□□□□ 0.31
SNAPC1-201ENST00000216294 RARAP10276 462 aa17.02■□□□□ 0.31
SNAPC1-201ENST00000216294 SWT1Q5T5J6 900 aaKnown RBP17.02■□□□□ 0.31
SNAPC1-201ENST00000216294 SEMA4DQ92854 862 aa17.02■□□□□ 0.31
SNAPC1-201ENST00000216294 ZNF317Q96PQ6 595 aaPredicted RBP17.02■□□□□ 0.31
SNAPC1-201ENST00000216294 ATXN2Q99700 1313 aaKnown RBP17.02■□□□□ 0.31
SNAPC1-201ENST00000216294 WDR11Q9BZH6 1224 aa17.02■□□□□ 0.31
SNAPC1-201ENST00000216294 ABCF3Q9NUQ8 709 aa17.02■□□□□ 0.31
SNAPC1-201ENST00000216294 ARHGEF35A5YM69 484 aa17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 HOXA7P31268 230 aaPredicted RBP17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 CHKAP35790 457 aa17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 MAP3K10Q02779 954 aa17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 ZSWIM1Q9BR11 485 aa17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 TRPC6Q9Y210 931 aa17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 PIK3CDO00329 1044 aa17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 O00370 1275 aa17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 EIF3DO15371 548 aaKnown RBP eCLIP17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 MAP2K2P36507 400 aa17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 PEX5P50542 639 aa17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 PPP1R7Q15435 360 aa17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 PADI6Q6TGC4 694 aa17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 PARP9Q8IXQ6 854 aa17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 ANKRD42Q8N9B4 389 aa17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 EIF1ADQ8N9N8 165 aaKnown RBP17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 GDAP1Q8TB36 358 aa17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 TCP11Q8WWU5 503 aa17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 KREMEN1Q96MU8 473 aa17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 PI4K2AQ9BTU6 479 aa17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 ADAM33Q9BZ11 813 aa17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 HOMER2Q9NSB8 354 aa17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 TBK1Q9UHD2 729 aa17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 PCDHA3Q9Y5H8 950 aa17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 BRCA1P38398 1863 aaKnown RBP17.01■□□□□ 0.31
SNAPC1-201ENST00000216294 SLC16A4O15374 487 aa17■□□□□ 0.31
SNAPC1-201ENST00000216294 SPOPO43791 374 aa17■□□□□ 0.31
SNAPC1-201ENST00000216294 PHF2O75151 1096 aa17■□□□□ 0.31
SNAPC1-201ENST00000216294 GH1P01241 217 aa17■□□□□ 0.31
SNAPC1-201ENST00000216294 ADRB2P07550 413 aa17■□□□□ 0.31
SNAPC1-201ENST00000216294 CDR1P51861 262 aa17■□□□□ 0.31
SNAPC1-201ENST00000216294 KIF22Q14807 665 aa17■□□□□ 0.31
SNAPC1-201ENST00000216294 HIBCHQ6NVY1 386 aaPredicted RBP17■□□□□ 0.31
SNAPC1-201ENST00000216294 TBC1D1Q86TI0 1168 aaPredicted RBP17■□□□□ 0.31
SNAPC1-201ENST00000216294 CBWD2Q8IUF1 395 aa17■□□□□ 0.31
SNAPC1-201ENST00000216294 THOC1Q96FV9 657 aaKnown RBP17■□□□□ 0.31
SNAPC1-201ENST00000216294 NCAPGQ9BPX3 1015 aa17■□□□□ 0.31
SNAPC1-201ENST00000216294 NUP85Q9BW27 656 aa17■□□□□ 0.31
SNAPC1-201ENST00000216294 INTS9Q9NV88 658 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms