RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 POLR3CQ9BUI4 534 aaPredicted RBP16.62■□□□□ 0.25
UPK3A-201ENST00000216211 KLK14Q9P0G3 267 aa16.62■□□□□ 0.25
UPK3A-201ENST00000216211 BRD1O95696 1058 aa16.61■□□□□ 0.25
UPK3A-201ENST00000216211 EFEMP2O95967 443 aa16.61■□□□□ 0.25
UPK3A-201ENST00000216211 ASGR2P07307 311 aa16.61■□□□□ 0.25
UPK3A-201ENST00000216211 OR52Z1P0C646 297 aa16.61■□□□□ 0.25
UPK3A-201ENST00000216211 MRE11P49959 708 aa16.61■□□□□ 0.25
UPK3A-201ENST00000216211 VCPP55072 806 aaKnown RBP16.61■□□□□ 0.25
UPK3A-201ENST00000216211 MTMR3Q13615 1198 aa16.61■□□□□ 0.25
UPK3A-201ENST00000216211 GPR149Q86SP6 731 aa16.61■□□□□ 0.25
UPK3A-201ENST00000216211 RNF168Q8IYW5 571 aaPredicted RBP16.61■□□□□ 0.25
UPK3A-201ENST00000216211 GSTCDQ8NEC7 633 aa16.61■□□□□ 0.25
UPK3A-201ENST00000216211 MCPH1Q8NEM0 835 aa16.61■□□□□ 0.25
UPK3A-201ENST00000216211 NACC1Q96RE7 527 aa16.61■□□□□ 0.25
UPK3A-201ENST00000216211 RPS6KC1Q96S38 1066 aa16.61■□□□□ 0.25
UPK3A-201ENST00000216211 SMOC2Q9H3U7 446 aa16.61■□□□□ 0.25
UPK3A-201ENST00000216211 PRMT7Q9NVM4 692 aaPredicted RBP16.61■□□□□ 0.25
UPK3A-201ENST00000216211 PARP2Q9UGN5 583 aa16.61■□□□□ 0.25
UPK3A-201ENST00000216211 SORCS3Q9UPU3 1222 aa16.61■□□□□ 0.25
UPK3A-201ENST00000216211 ZDBF2Q9HCK1 2354 aa16.61■□□□□ 0.25
UPK3A-201ENST00000216211 A0A1B0GUA9 196 aa16.6■□□□□ 0.25
UPK3A-201ENST00000216211 GLUD2P49448 558 aa16.6■□□□□ 0.25
UPK3A-201ENST00000216211 KIAA0319Q5VV43 1072 aa16.6■□□□□ 0.25
UPK3A-201ENST00000216211 CDCA2Q69YH5 1023 aaPredicted RBP16.6■□□□□ 0.25
UPK3A-201ENST00000216211 ZDHHC14Q8IZN3 488 aa16.6■□□□□ 0.25
UPK3A-201ENST00000216211 BSNDQ8WZ55 320 aa16.6■□□□□ 0.25
UPK3A-201ENST00000216211 RABGGTAQ92696 567 aa16.6■□□□□ 0.25
UPK3A-201ENST00000216211 LLPHQ9BRT6 129 aaKnown RBP16.6■□□□□ 0.25
UPK3A-201ENST00000216211 FOXP1Q9H334 677 aaPredicted RBP16.6■□□□□ 0.25
UPK3A-201ENST00000216211 MAN1C1Q9NR34 630 aa16.6■□□□□ 0.25
UPK3A-201ENST00000216211 LIMD1Q9UGP4 676 aa16.6■□□□□ 0.25
UPK3A-201ENST00000216211 SSX2IPQ9Y2D8 614 aa16.6■□□□□ 0.25
UPK3A-201ENST00000216211 ARHGEF35A5YM69 484 aa16.59■□□□□ 0.25
UPK3A-201ENST00000216211 TTLL13PA6NNM8 815 aa16.59■□□□□ 0.25
UPK3A-201ENST00000216211 TEX28O15482 410 aa16.59■□□□□ 0.25
UPK3A-201ENST00000216211 NR1I2O75469 434 aa16.59■□□□□ 0.25
UPK3A-201ENST00000216211 ADH1AP07327 375 aa16.59■□□□□ 0.25
UPK3A-201ENST00000216211 MYBP10242 640 aa16.59■□□□□ 0.25
UPK3A-201ENST00000216211 RPA1P27694 616 aa16.59■□□□□ 0.25
UPK3A-201ENST00000216211 RBM25P49756 843 aaKnown RBP16.59■□□□□ 0.25
UPK3A-201ENST00000216211 ORC2Q13416 577 aaPredicted RBP16.59■□□□□ 0.25
UPK3A-201ENST00000216211 GNL2Q13823 731 aaKnown RBP16.59■□□□□ 0.25
UPK3A-201ENST00000216211 NBR1Q14596 966 aa16.59■□□□□ 0.25
UPK3A-201ENST00000216211 TTC38Q5R3I4 469 aa16.59■□□□□ 0.25
UPK3A-201ENST00000216211 PADI6Q6TGC4 694 aa16.59■□□□□ 0.25
UPK3A-201ENST00000216211 PPP4R3CPQ6ZMV5 832 aa16.59■□□□□ 0.25
UPK3A-201ENST00000216211 ZBTB8OSQ8IWT0 167 aa16.59■□□□□ 0.25
UPK3A-201ENST00000216211 UBALD2Q8IYN6 164 aa16.59■□□□□ 0.25
UPK3A-201ENST00000216211 PLCD3Q8N3E9 789 aa16.59■□□□□ 0.25
UPK3A-201ENST00000216211 FBXO18Q8NFZ0 1043 aa16.59■□□□□ 0.25
UPK3A-201ENST00000216211 ERMNQ8TAM6 284 aa16.59■□□□□ 0.25
UPK3A-201ENST00000216211 B3GALT6Q96L58 329 aa16.59■□□□□ 0.25
UPK3A-201ENST00000216211 PRIMPOLQ96LW4 560 aa16.59■□□□□ 0.25
UPK3A-201ENST00000216211 COLEC11Q9BWP8 271 aa16.59■□□□□ 0.25
UPK3A-201ENST00000216211 FZD8Q9H461 694 aa16.59■□□□□ 0.25
UPK3A-201ENST00000216211 CACNG4Q9UBN1 327 aa16.59■□□□□ 0.25
UPK3A-201ENST00000216211 USTQ9Y2C2 406 aa16.59■□□□□ 0.25
UPK3A-201ENST00000216211 USP20Q9Y2K6 914 aa16.59■□□□□ 0.25
UPK3A-201ENST00000216211 PIEZO1Q92508 2521 aa16.59■□□□□ 0.25
UPK3A-201ENST00000216211 VWA8A3KMH1 1905 aa16.58■□□□□ 0.25
UPK3A-201ENST00000216211 LIG1P18858 919 aa16.58■□□□□ 0.24
UPK3A-201ENST00000216211 AVPR2P30518 371 aa16.58■□□□□ 0.24
UPK3A-201ENST00000216211 PTPN5P54829 565 aa16.58■□□□□ 0.24
UPK3A-201ENST00000216211 HMGN5P82970 282 aaKnown RBP16.58■□□□□ 0.24
UPK3A-201ENST00000216211 DSG1Q02413 1049 aa16.58■□□□□ 0.24
UPK3A-201ENST00000216211 TCF15Q12870 199 aa16.58■□□□□ 0.24
UPK3A-201ENST00000216211 GRIK3Q13003 919 aa16.58■□□□□ 0.24
UPK3A-201ENST00000216211 ECM1Q16610 540 aa16.58■□□□□ 0.24
UPK3A-201ENST00000216211 FUT10Q6P4F1 479 aa16.58■□□□□ 0.24
UPK3A-201ENST00000216211 CCDC149Q6ZUS6 474 aa16.58■□□□□ 0.24
UPK3A-201ENST00000216211 NOSTRINQ8IVI9 506 aa16.58■□□□□ 0.24
UPK3A-201ENST00000216211 FAM184AQ8NB25 1140 aa16.58■□□□□ 0.24
UPK3A-201ENST00000216211 ZSCAN31Q96LW9 406 aaPredicted RBP16.58■□□□□ 0.24
UPK3A-201ENST00000216211 PHOX2BQ99453 314 aa16.58■□□□□ 0.24
UPK3A-201ENST00000216211 GPR62Q9BZJ7 368 aa16.58■□□□□ 0.24
UPK3A-201ENST00000216211 C2orf40Q9H1Z8 148 aa16.58■□□□□ 0.24
UPK3A-201ENST00000216211 PDZD7Q9H5P4 517 aa16.58■□□□□ 0.24
UPK3A-201ENST00000216211 RXFP1Q9HBX9 757 aa16.58■□□□□ 0.24
UPK3A-201ENST00000216211 POLD4Q9HCU8 107 aa16.58■□□□□ 0.24
UPK3A-201ENST00000216211 ADAM28Q9UKQ2 775 aa16.58■□□□□ 0.24
UPK3A-201ENST00000216211 MYH11P35749 1972 aa16.57■□□□□ 0.24
UPK3A-201ENST00000216211 ZMYM2Q9UBW7 1377 aa16.57■□□□□ 0.24
UPK3A-201ENST00000216211 N4BP3O15049 544 aa16.57■□□□□ 0.24
UPK3A-201ENST00000216211 GLUD1P00367 558 aa16.57■□□□□ 0.24
UPK3A-201ENST00000216211 PRKCBP05771 671 aa16.57■□□□□ 0.24
UPK3A-201ENST00000216211 SPATA31D3P0C874 917 aa16.57■□□□□ 0.24
UPK3A-201ENST00000216211 CYP11B2P19099 503 aa16.57■□□□□ 0.24
UPK3A-201ENST00000216211 PRPF4BQ13523 1007 aaKnown RBP16.57■□□□□ 0.24
UPK3A-201ENST00000216211 FAM187BQ17R55 369 aa16.57■□□□□ 0.24
UPK3A-201ENST00000216211 TMEM132AQ24JP5 1023 aa16.57■□□□□ 0.24
UPK3A-201ENST00000216211 C15orf39Q6ZRI6 1047 aa16.57■□□□□ 0.24
UPK3A-201ENST00000216211 SPATA31D4Q6ZUB0 917 aa16.57■□□□□ 0.24
UPK3A-201ENST00000216211 GLYCTKQ8IVS8 523 aa16.57■□□□□ 0.24
UPK3A-201ENST00000216211 C4orf32Q8N8J7 132 aa16.57■□□□□ 0.24
UPK3A-201ENST00000216211 ACSF2Q96CM8 615 aaPredicted RBP16.57■□□□□ 0.24
UPK3A-201ENST00000216211 KIF2CQ99661 725 aa16.57■□□□□ 0.24
UPK3A-201ENST00000216211 PRRX2Q99811 253 aa16.57■□□□□ 0.24
UPK3A-201ENST00000216211 CHST7Q9NS84 486 aa16.57■□□□□ 0.24
UPK3A-201ENST00000216211 SNTG2Q9NY99 539 aa16.57■□□□□ 0.24
UPK3A-201ENST00000216211 USP34Q70CQ2 3546 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms