RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 SHANK3Q9BYB0 1731 aa17.93■□□□□ 0.46
CTDP1-201ENST00000075430 MSH4O15457 936 aa17.93■□□□□ 0.46
CTDP1-201ENST00000075430 C21orf2O43822 256 aa17.93■□□□□ 0.46
CTDP1-201ENST00000075430 COILP38432 576 aaPredicted RBP17.93■□□□□ 0.46
CTDP1-201ENST00000075430 POU5F1Q01860 360 aaKnown RBP17.93■□□□□ 0.46
CTDP1-201ENST00000075430 RASGEF1CQ8N431 466 aa17.93■□□□□ 0.46
CTDP1-201ENST00000075430 IFT74Q96LB3 600 aa17.93■□□□□ 0.46
CTDP1-201ENST00000075430 VPS37BQ9H9H4 285 aa17.93■□□□□ 0.46
CTDP1-201ENST00000075430 APEX2Q9UBZ4 518 aa17.93■□□□□ 0.46
CTDP1-201ENST00000075430 KAT6AQ92794 2004 aa17.93■□□□□ 0.46
CTDP1-201ENST00000075430 ANKRD62A6NC57 917 aa17.93■□□□□ 0.46
CTDP1-201ENST00000075430 AP1G2O75843 785 aa17.93■□□□□ 0.46
CTDP1-201ENST00000075430 PSMC4P43686 418 aa17.93■□□□□ 0.46
CTDP1-201ENST00000075430 SEPT7Q16181 437 aaKnown RBP17.93■□□□□ 0.46
CTDP1-201ENST00000075430 ZNF564Q8TBZ8 553 aaPredicted RBP17.93■□□□□ 0.46
CTDP1-201ENST00000075430 CRAMP1Q96RY5 1269 aa17.93■□□□□ 0.46
CTDP1-201ENST00000075430 CBWD1Q9BRT8 395 aa17.93■□□□□ 0.46
CTDP1-201ENST00000075430 ENTPD5O75356 428 aa17.93■□□□□ 0.46
CTDP1-201ENST00000075430 SEMA3FQ13275 785 aa17.93■□□□□ 0.46
CTDP1-201ENST00000075430 CERKLQ49MI3 558 aaPredicted RBP17.93■□□□□ 0.46
CTDP1-201ENST00000075430 COBLL1Q53SF7 1204 aa17.93■□□□□ 0.46
CTDP1-201ENST00000075430 PIGWQ7Z7B1 504 aa17.93■□□□□ 0.46
CTDP1-201ENST00000075430 PARVGQ9HBI0 331 aa17.93■□□□□ 0.46
CTDP1-201ENST00000075430 ANAPC7Q9UJX3 599 aa17.93■□□□□ 0.46
CTDP1-201ENST00000075430 ANAPC5Q9UJX4 755 aa17.93■□□□□ 0.46
CTDP1-201ENST00000075430 VCAM1P19320 739 aa17.92■□□□□ 0.46
CTDP1-201ENST00000075430 CERS5Q8N5B7 392 aa17.92■□□□□ 0.46
CTDP1-201ENST00000075430 SYT2Q8N9I0 419 aaPredicted RBP17.92■□□□□ 0.46
CTDP1-201ENST00000075430 SMIM24O75264 130 aa17.92■□□□□ 0.46
CTDP1-201ENST00000075430 GPC5P78333 572 aa17.92■□□□□ 0.46
CTDP1-201ENST00000075430 SETDB1Q15047 1291 aa17.92■□□□□ 0.46
CTDP1-201ENST00000075430 ZNF365Q70YC5 407 aa17.92■□□□□ 0.46
CTDP1-201ENST00000075430 TTC8Q8TAM2 541 aa17.92■□□□□ 0.46
CTDP1-201ENST00000075430 NUDCD1Q96RS6 583 aa17.92■□□□□ 0.46
CTDP1-201ENST00000075430 ZSWIM1Q9BR11 485 aa17.92■□□□□ 0.46
CTDP1-201ENST00000075430 KIFC3Q9BVG8 833 aa17.92■□□□□ 0.46
CTDP1-201ENST00000075430 ESYT2A0FGR8 921 aa17.92■□□□□ 0.46
CTDP1-201ENST00000075430 CLRN2A0PK11 232 aa17.92■□□□□ 0.46
CTDP1-201ENST00000075430 CCDC189A1A4V9 331 aa17.92■□□□□ 0.46
CTDP1-201ENST00000075430 EPHB2P29323 1055 aa17.92■□□□□ 0.46
CTDP1-201ENST00000075430 CHRNA3P32297 505 aa17.92■□□□□ 0.46
CTDP1-201ENST00000075430 EMC10Q5UCC4 262 aa17.92■□□□□ 0.46
CTDP1-201ENST00000075430 CDC42EP5Q6NZY7 148 aa17.92■□□□□ 0.46
CTDP1-201ENST00000075430 PPP4R3CPQ6ZMV5 832 aa17.92■□□□□ 0.46
CTDP1-201ENST00000075430 GJD4Q96KN9 370 aaPredicted RBP17.92■□□□□ 0.46
CTDP1-201ENST00000075430 PCDHB18PQ96TA0 734 aa17.92■□□□□ 0.46
CTDP1-201ENST00000075430 C10orf88Q9H8K7 445 aa17.92■□□□□ 0.46
CTDP1-201ENST00000075430 TOPORSQ9NS56 1045 aaPredicted RBP17.92■□□□□ 0.46
CTDP1-201ENST00000075430 ADAM22Q9P0K1 906 aa17.92■□□□□ 0.46
CTDP1-201ENST00000075430 XIRP1Q702N8 1843 aaKnown RBP17.91■□□□□ 0.46
CTDP1-201ENST00000075430 O00370 1275 aa17.91■□□□□ 0.46
CTDP1-201ENST00000075430 ASAP2O43150 1006 aa17.91■□□□□ 0.46
CTDP1-201ENST00000075430 ATF7P17544 494 aaPredicted RBP17.91■□□□□ 0.46
CTDP1-201ENST00000075430 MXRA7P84157 204 aa17.91■□□□□ 0.46
CTDP1-201ENST00000075430 SLFN11Q7Z7L1 901 aa17.91■□□□□ 0.46
CTDP1-201ENST00000075430 SLC13A5Q86YT5 568 aaPredicted RBP17.91■□□□□ 0.46
CTDP1-201ENST00000075430 FBF1Q8TES7 1133 aa17.91■□□□□ 0.46
CTDP1-201ENST00000075430 CPA5Q8WXQ8 436 aa17.91■□□□□ 0.46
CTDP1-201ENST00000075430 STMN4Q9H169 189 aaPredicted RBP17.91■□□□□ 0.46
CTDP1-201ENST00000075430 DNAJC18Q9H819 358 aa17.91■□□□□ 0.46
CTDP1-201ENST00000075430 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.91■□□□□ 0.46
CTDP1-201ENST00000075430 GGA2Q9UJY4 613 aa17.91■□□□□ 0.46
CTDP1-201ENST00000075430 SLC12A4Q9UP95 1085 aa17.91■□□□□ 0.46
CTDP1-201ENST00000075430 TRAF3IP3Q9Y228 551 aa17.91■□□□□ 0.46
CTDP1-201ENST00000075430 GAS7O60861 476 aa17.91■□□□□ 0.46
CTDP1-201ENST00000075430 BANF1O75531 89 aa17.91■□□□□ 0.46
CTDP1-201ENST00000075430 BCRP11274 1271 aa17.91■□□□□ 0.46
CTDP1-201ENST00000075430 CETPP11597 493 aa17.91■□□□□ 0.46
CTDP1-201ENST00000075430 CD58P19256 250 aa17.91■□□□□ 0.46
CTDP1-201ENST00000075430 PRKCIP41743 596 aa17.91■□□□□ 0.46
CTDP1-201ENST00000075430 ARMC2Q8NEN0 867 aa17.91■□□□□ 0.46
CTDP1-201ENST00000075430 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.91■□□□□ 0.469e-10■■■■■ 79.8
CTDP1-201ENST00000075430 PGM2Q96G03 612 aa17.91■□□□□ 0.46
CTDP1-201ENST00000075430 ARL2BPQ9Y2Y0 163 aa17.91■□□□□ 0.46
CTDP1-201ENST00000075430 ARHGEF35A5YM69 484 aa17.9■□□□□ 0.46
CTDP1-201ENST00000075430 PAEPP09466 180 aa17.9■□□□□ 0.46
CTDP1-201ENST00000075430 CHRNB2P17787 502 aa17.9■□□□□ 0.46
CTDP1-201ENST00000075430 POLE2P56282 527 aa17.9■□□□□ 0.46
CTDP1-201ENST00000075430 TLDC1Q6P9B6 456 aa17.9■□□□□ 0.46
CTDP1-201ENST00000075430 APBB1IPQ7Z5R6 666 aaPredicted RBP17.9■□□□□ 0.46
CTDP1-201ENST00000075430 FBXO11Q86XK2 927 aa17.9■□□□□ 0.46
CTDP1-201ENST00000075430 TDRD3Q9H7E2 651 aaKnown RBP17.9■□□□□ 0.46
CTDP1-201ENST00000075430 HOMER2Q9NSB8 354 aa17.9■□□□□ 0.46
CTDP1-201ENST00000075430 PAPPAQ13219 1627 aa17.9■□□□□ 0.46
CTDP1-201ENST00000075430 FAM187AA6NFU0 413 aa17.9■□□□□ 0.46
CTDP1-201ENST00000075430 ZSCAN5DPP0CG00 497 aa17.9■□□□□ 0.46
CTDP1-201ENST00000075430 GHRP10912 638 aa17.9■□□□□ 0.46
CTDP1-201ENST00000075430 BMP3P12645 472 aa17.9■□□□□ 0.46
CTDP1-201ENST00000075430 ATF2P15336 505 aa17.9■□□□□ 0.46
CTDP1-201ENST00000075430 RPA1P27694 616 aa17.9■□□□□ 0.46
CTDP1-201ENST00000075430 PTGIRP43119 386 aa17.9■□□□□ 0.46
CTDP1-201ENST00000075430 ICA1Q05084 483 aa17.9■□□□□ 0.46
CTDP1-201ENST00000075430 PPATQ06203 517 aa17.9■□□□□ 0.46
CTDP1-201ENST00000075430 PPP3CAQ08209 521 aa17.9■□□□□ 0.46
CTDP1-201ENST00000075430 DHX34Q14147 1143 aaKnown RBP17.9■□□□□ 0.46
CTDP1-201ENST00000075430 MDH1BQ5I0G3 518 aa17.9■□□□□ 0.46
CTDP1-201ENST00000075430 SLFN12Q8IYM2 578 aa17.9■□□□□ 0.46
CTDP1-201ENST00000075430 MYLK2Q9H1R3 596 aa17.9■□□□□ 0.46
CTDP1-201ENST00000075430 GPRC5CQ9NQ84 441 aa17.9■□□□□ 0.46
CTDP1-201ENST00000075430 AGPAT3Q9NRZ7 376 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms