RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 TRIM59Q8IWR1 403 aa24.59■■□□□ 1.53
TARBP1-201ENST00000040877 TRIM55Q9BYV6 548 aa24.59■■□□□ 1.53
TARBP1-201ENST00000040877 GGA3Q9NZ52 723 aa24.59■■□□□ 1.53
TARBP1-201ENST00000040877 CREB3O43889 395 aa24.59■■□□□ 1.53
TARBP1-201ENST00000040877 ADORA2BP29275 332 aa24.59■■□□□ 1.53
TARBP1-201ENST00000040877 REEP2Q9BRK0 252 aa24.59■■□□□ 1.53
TARBP1-201ENST00000040877 DNAJC5Q9H3Z4 198 aa24.59■■□□□ 1.53
TARBP1-201ENST00000040877 RASA4BC9J798 803 aa24.58■■□□□ 1.53
TARBP1-201ENST00000040877 GSTA4O15217 222 aa24.58■■□□□ 1.53
TARBP1-201ENST00000040877 RASA4O43374 803 aa24.58■■□□□ 1.53
TARBP1-201ENST00000040877 PNMA6AP0CW24 399 aaPredicted RBP24.58■■□□□ 1.53
TARBP1-201ENST00000040877 BTBD8Q5XKL5 378 aa24.58■■□□□ 1.53
TARBP1-201ENST00000040877 DNAJC17Q9NVM6 304 aaKnown RBP24.58■■□□□ 1.53
TARBP1-201ENST00000040877 GNGT2O14610 69 aa24.58■■□□□ 1.53
TARBP1-201ENST00000040877 ESRRAP11474 423 aaPredicted RBP24.58■■□□□ 1.53
TARBP1-201ENST00000040877 FXR2P51116 673 aaKnown RBP eCLIP24.58■■□□□ 1.53
TARBP1-201ENST00000040877 GANCQ8TET4 914 aa24.58■■□□□ 1.53
TARBP1-201ENST00000040877 MKNK1Q9BUB5 465 aa24.58■■□□□ 1.53
TARBP1-201ENST00000040877 JMJD4Q9H9V9 463 aa24.58■■□□□ 1.53
TARBP1-201ENST00000040877 SRGNP10124 158 aa24.58■■□□□ 1.53
TARBP1-201ENST00000040877 HSP90AA5PQ58FG0 334 aa24.58■■□□□ 1.53
TARBP1-201ENST00000040877 NUGGCQ68CJ6 796 aa24.58■■□□□ 1.53
TARBP1-201ENST00000040877 ELOA2Q8IYF1 753 aaPredicted RBP24.58■■□□□ 1.53
TARBP1-201ENST00000040877 AFG1LQ8WV93 481 aa24.58■■□□□ 1.53
TARBP1-201ENST00000040877 PIN4Q9Y237 131 aaKnown RBP24.58■■□□□ 1.53
TARBP1-201ENST00000040877 SRGAP2O75044 1071 aa24.58■■□□□ 1.52
TARBP1-201ENST00000040877 TADA2BQ86TJ2 420 aa24.58■■□□□ 1.52
TARBP1-201ENST00000040877 RAET1EQ8TD07 263 aa24.58■■□□□ 1.52
TARBP1-201ENST00000040877 ZBTB18Q99592 522 aa24.58■■□□□ 1.52
TARBP1-201ENST00000040877 DRC3Q9H069 523 aa24.58■■□□□ 1.52
TARBP1-201ENST00000040877 RPA1P27694 616 aa24.57■■□□□ 1.52
TARBP1-201ENST00000040877 PMS2P54278 862 aa24.57■■□□□ 1.52
TARBP1-201ENST00000040877 TMPRSS15P98073 1019 aa24.57■■□□□ 1.52
TARBP1-201ENST00000040877 DRP2Q13474 957 aa24.57■■□□□ 1.52
TARBP1-201ENST00000040877 SGSM1Q2NKQ1 1148 aa24.57■■□□□ 1.52
TARBP1-201ENST00000040877 PDLIM2Q96JY6 352 aa24.57■■□□□ 1.52
TARBP1-201ENST00000040877 PITPNM3Q9BZ71 974 aa24.57■■□□□ 1.52
TARBP1-201ENST00000040877 SUN2Q9UH99 717 aa24.57■■□□□ 1.52
TARBP1-201ENST00000040877 TUBE1Q9UJT0 475 aa24.57■■□□□ 1.52
TARBP1-201ENST00000040877 SNF8Q96H20 258 aa24.57■■□□□ 1.52
TARBP1-201ENST00000040877 DDX50Q9BQ39 737 aaKnown RBP24.57■■□□□ 1.52
TARBP1-201ENST00000040877 ZBTB12Q9Y330 459 aaPredicted RBP24.57■■□□□ 1.52
TARBP1-201ENST00000040877 RAD51Q06609 339 aa24.57■■□□□ 1.52
TARBP1-201ENST00000040877 WDR72Q3MJ13 1102 aa24.57■■□□□ 1.52
TARBP1-201ENST00000040877 MOV10L1Q9BXT6 1211 aaKnown RBP24.57■■□□□ 1.52
TARBP1-201ENST00000040877 ANKEF1Q9NU02 776 aa24.57■■□□□ 1.52
TARBP1-201ENST00000040877 FIS1Q9Y3D6 152 aa24.57■■□□□ 1.52
TARBP1-201ENST00000040877 FARP1Q9Y4F1 1045 aaPredicted RBP24.57■■□□□ 1.52
TARBP1-201ENST00000040877 MGEA5O60502 916 aa24.57■■□□□ 1.52
TARBP1-201ENST00000040877 CPB1P15086 417 aa24.57■■□□□ 1.52
TARBP1-201ENST00000040877 GMPSP49915 693 aaPredicted RBP24.57■■□□□ 1.52
TARBP1-201ENST00000040877 CCDC144BQ3MJ40 725 aa24.57■■□□□ 1.52
TARBP1-201ENST00000040877 DAGLBQ8NCG7 672 aa24.57■■□□□ 1.52
TARBP1-201ENST00000040877 TAF1DQ9H5J8 278 aaPredicted RBP24.57■■□□□ 1.52
TARBP1-201ENST00000040877 IL18RAPO95256 599 aa24.56■■□□□ 1.52
TARBP1-201ENST00000040877 EMC2Q15006 297 aa24.56■■□□□ 1.52
TARBP1-201ENST00000040877 NFRKBQ6P4R8 1299 aa24.56■■□□□ 1.52
TARBP1-201ENST00000040877 ATP11CQ8NB49 1132 aa24.56■■□□□ 1.52
TARBP1-201ENST00000040877 SCFD2Q8WU76 684 aa24.56■■□□□ 1.52
TARBP1-201ENST00000040877 DHX35Q9H5Z1 703 aaKnown RBP24.56■■□□□ 1.52
TARBP1-201ENST00000040877 PPP1R12AO14974 1030 aaPredicted RBP24.56■■□□□ 1.52
TARBP1-201ENST00000040877 NCF2P19878 526 aaPredicted RBP24.56■■□□□ 1.52
TARBP1-201ENST00000040877 OCRLQ01968 901 aa24.56■■□□□ 1.52
TARBP1-201ENST00000040877 SLC12A1Q13621 1099 aa24.56■■□□□ 1.52
TARBP1-201ENST00000040877 IER5Q5VY09 327 aa24.56■■□□□ 1.52
TARBP1-201ENST00000040877 THEGQ9P2T0 379 aa24.56■■□□□ 1.52
TARBP1-201ENST00000040877 WDR91A4D1P6 747 aa24.56■■□□□ 1.52
TARBP1-201ENST00000040877 CETPP11597 493 aa24.56■■□□□ 1.52
TARBP1-201ENST00000040877 FMO5P49326 533 aa24.56■■□□□ 1.52
TARBP1-201ENST00000040877 SLC18A3Q16572 532 aa24.56■■□□□ 1.52
TARBP1-201ENST00000040877 SYDE1Q6ZW31 735 aaPredicted RBP24.56■■□□□ 1.52
TARBP1-201ENST00000040877 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.56■■□□□ 1.523e-6■□□□□ 9.1
TARBP1-201ENST00000040877 MAML1Q92585 1016 aa24.56■■□□□ 1.52
TARBP1-201ENST00000040877 SP110Q9HB58 689 aa24.56■■□□□ 1.52
TARBP1-201ENST00000040877 ZFYVE28Q9HCC9 887 aa24.56■■□□□ 1.52
TARBP1-201ENST00000040877 AP3B1O00203 1094 aa24.56■■□□□ 1.52
TARBP1-201ENST00000040877 P4HA2O15460 535 aa24.56■■□□□ 1.52
TARBP1-201ENST00000040877 KRT14P02533 472 aa24.56■■□□□ 1.52
TARBP1-201ENST00000040877 FRA10AC1Q70Z53 315 aa24.56■■□□□ 1.52
TARBP1-201ENST00000040877 TEX2Q8IWB9 1127 aa24.56■■□□□ 1.52
TARBP1-201ENST00000040877 TTC8Q8TAM2 541 aa24.56■■□□□ 1.52
TARBP1-201ENST00000040877 SH3TC2Q8TF17 1288 aa24.56■■□□□ 1.52
TARBP1-201ENST00000040877 C18orf8Q96DM3 657 aa24.56■■□□□ 1.52
TARBP1-201ENST00000040877 CSPG5O95196 566 aa24.55■■□□□ 1.52
TARBP1-201ENST00000040877 CYP2C19P33261 490 aa24.55■■□□□ 1.52
TARBP1-201ENST00000040877 SMIM5Q71RC9 77 aa24.55■■□□□ 1.52
TARBP1-201ENST00000040877 ANKRD13AQ8IZ07 590 aa24.55■■□□□ 1.52
TARBP1-201ENST00000040877 PACSIN2Q9UNF0 486 aaPredicted RBP24.55■■□□□ 1.52
TARBP1-201ENST00000040877 KRT33BQ14525 404 aa24.55■■□□□ 1.52
TARBP1-201ENST00000040877 FSCBQ5H9T9 825 aa24.55■■□□□ 1.52
TARBP1-201ENST00000040877 CCDC124Q96CT7 223 aaKnown RBP24.55■■□□□ 1.52
TARBP1-201ENST00000040877 SPDL1Q96EA4 605 aa24.55■■□□□ 1.52
TARBP1-201ENST00000040877 EPAS1Q99814 870 aa24.55■■□□□ 1.52
TARBP1-201ENST00000040877 UPF3AQ9H1J1 476 aaKnown RBP24.55■■□□□ 1.52
TARBP1-201ENST00000040877 IQSEC2Q5JU85 1478 aa24.55■■□□□ 1.52
TARBP1-201ENST00000040877 FRMD3A2A2Y4 597 aa24.55■■□□□ 1.52
TARBP1-201ENST00000040877 YWHAHQ04917 246 aaPredicted RBP24.55■■□□□ 1.52
TARBP1-201ENST00000040877 CCDC137Q6PK04 289 aaKnown RBP24.55■■□□□ 1.52
TARBP1-201ENST00000040877 ZNF668Q96K58 619 aaPredicted RBP24.55■■□□□ 1.52
TARBP1-201ENST00000040877 FGD4Q96M96 766 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms