RNA–Protein interactions for RNA: ENST00000027335.7

CDH17-201, Transcript of cadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH17, Length 3,693 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-201ENST00000027335 RIN2Q8WYP3 895 aaPredicted RBP5.28□□□□□ -1.56
CDH17-201ENST00000027335 ANKRD7Q92527 254 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 SHISA4Q96DD7 197 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 PURBQ96QR8 312 aaKnown RBP5.28□□□□□ -1.56
CDH17-201ENST00000027335 OSBPL9Q96SU4 736 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 EIF3CQ99613 913 aaKnown RBP5.28□□□□□ -1.56
CDH17-201ENST00000027335 DNAI2Q9GZS0 605 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 DDX47Q9H0S4 455 aaKnown RBP5.28□□□□□ -1.56
CDH17-201ENST00000027335 RIOX1Q9H6W3 641 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 CUEDC1Q9NWM3 386 aaPredicted RBP5.28□□□□□ -1.56
CDH17-201ENST00000027335 NXF1Q9UBU9 619 aaKnown RBP5.28□□□□□ -1.56
CDH17-201ENST00000027335 ATP8A1Q9Y2Q0 1164 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 BZW2Q9Y6E2 419 aaKnown RBP5.28□□□□□ -1.56
CDH17-201ENST00000027335 AKAP11Q9UKA4 1901 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 IRS2Q9Y4H2 1338 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 A0A1W2PRQ8 180 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 DENND3A2RUS2 1198 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 GRXCR2A6NFK2 248 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 GLTPD2A6NH11 291 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 MSH4O15457 936 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 TBC1D12O60347 775 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 CYP11B2P19099 503 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 SMARCA1P28370 1054 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 GJA8P48165 433 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 CASP4P49662 377 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 TFAMQ00059 246 aaKnown RBP5.28□□□□□ -1.56
CDH17-201ENST00000027335 BAATQ14032 418 aaPredicted RBP5.28□□□□□ -1.56
CDH17-201ENST00000027335 PLA2G4FQ68DD2 849 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 SMYD5Q6GMV2 418 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 PDXDC1Q6P996 788 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 MICALCLQ6ZW33 695 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.28□□□□□ -1.56
CDH17-201ENST00000027335 KIAA0895Q8NCT3 520 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 USP6NLQ92738 828 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 SLC10A4Q96EP9 437 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 L3MBTL3Q96JM7 780 aaPredicted RBP5.28□□□□□ -1.56
CDH17-201ENST00000027335 SLC39A3Q9BRY0 314 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 TRIM7Q9C029 511 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 AVENQ9NQS1 362 aaPredicted RBP5.28□□□□□ -1.56
CDH17-201ENST00000027335 TYW1Q9NV66 732 aaKnown RBP5.28□□□□□ -1.56
CDH17-201ENST00000027335 ADAM21Q9UKJ8 722 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 PCDHB4Q9Y5E5 795 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 FHOD1Q9Y613 1164 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 ESYT2A0FGR8 921 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 E7EVH7 732 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 GOLGA8SH3BPF8 625 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 MYO1FO00160 1098 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 PGRMC1O00264 195 aaKnown RBP5.28□□□□□ -1.56
CDH17-201ENST00000027335 IFRD1O00458 451 aaPredicted RBP5.28□□□□□ -1.56
CDH17-201ENST00000027335 NFIBO00712 420 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 PPP1R11O60927 126 aaPredicted RBP5.28□□□□□ -1.56
CDH17-201ENST00000027335 EYA4O95677 639 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 FGGP02679 453 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 COL6A1P12109 1028 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 NSFP46459 744 aaKnown RBP5.28□□□□□ -1.56
CDH17-201ENST00000027335 SLCO1A2P46721 670 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 QARSP47897 775 aaKnown RBP5.28□□□□□ -1.56
CDH17-201ENST00000027335 MARSP56192 900 aaKnown RBP5.28□□□□□ -1.56
CDH17-201ENST00000027335 SNX16P57768 344 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 E2F4Q16254 413 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 SCARA5Q6ZMJ2 495 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 JAZF1Q86VZ6 243 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 NPAS4Q8IUM7 802 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 APOBEC3FQ8IUX4 373 aaKnown RBP5.28□□□□□ -1.56
CDH17-201ENST00000027335 PASD1Q8IV76 773 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 XXYLT1Q8NBI6 393 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 ZNF280CQ8ND82 737 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.28□□□□□ -1.56
CDH17-201ENST00000027335 FRS2Q8WU20 508 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 NLRP4Q96MN2 994 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 CCDC77Q9BR77 488 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 FAM213AQ9BRX8 229 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 LRRC1Q9BTT6 524 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 KIFC3Q9BVG8 833 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 EHD4Q9H223 541 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 TMEM206Q9H813 350 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 HOXC10Q9NYD6 342 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 ZMAT5Q9UDW3 170 aaKnown RBP5.28□□□□□ -1.56
CDH17-201ENST00000027335 FEM1BQ9UK73 627 aa5.28□□□□□ -1.56
CDH17-201ENST00000027335 MRPL42Q9Y6G3 142 aaKnown RBP5.28□□□□□ -1.56
CDH17-201ENST00000027335 EMSYQ7Z589 1322 aa5.27□□□□□ -1.57
CDH17-201ENST00000027335 K7ERI5 159 aa5.27□□□□□ -1.57
CDH17-201ENST00000027335 GALR2O43603 387 aaPredicted RBP5.27□□□□□ -1.57
CDH17-201ENST00000027335 ABL1P00519 1130 aa5.27□□□□□ -1.57
CDH17-201ENST00000027335 P4HBP07237 508 aaKnown RBP5.27□□□□□ -1.57
CDH17-201ENST00000027335 TMEM191BP0C7N4 346 aa5.27□□□□□ -1.57
CDH17-201ENST00000027335 MYBL2P10244 700 aa5.27□□□□□ -1.57
CDH17-201ENST00000027335 ARP10275 920 aa5.27□□□□□ -1.57
CDH17-201ENST00000027335 KCNJ6P48051 423 aa5.27□□□□□ -1.57
CDH17-201ENST00000027335 IREB2P48200 963 aaKnown RBP5.27□□□□□ -1.57
CDH17-201ENST00000027335 MNAT1P51948 309 aa5.27□□□□□ -1.57
CDH17-201ENST00000027335 USP14P54578 494 aa5.27□□□□□ -1.57
CDH17-201ENST00000027335 MFAP3P55082 362 aa5.27□□□□□ -1.57
CDH17-201ENST00000027335 PTK2Q05397 1052 aa5.27□□□□□ -1.57
CDH17-201ENST00000027335 KCTD19Q17RG1 926 aaPredicted RBP5.27□□□□□ -1.57
CDH17-201ENST00000027335 HHATQ5VTY9 493 aa5.27□□□□□ -1.57
CDH17-201ENST00000027335 TRIM65Q6PJ69 517 aa5.27□□□□□ -1.57
CDH17-201ENST00000027335 HAUS6Q7Z4H7 955 aa5.27□□□□□ -1.57
CDH17-201ENST00000027335 TRIM42Q8IWZ5 723 aa5.27□□□□□ -1.57
CDH17-201ENST00000027335 THNSL1Q8IYQ7 743 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms