RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Nek8Q91ZR4 698 aa16.53■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Nuf2Q99P69 463 aa16.53■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Mettl7bQ9DD20 244 aa16.53■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Fam129cD3YZB0 591 aa16.53■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 D830030K20RikE9PYQ5 218 aa16.53■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Gm3043K7N693 218 aa16.53■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Gm16440K7N6G6 218 aa16.53■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Gm2244L7N2A3 218 aa16.53■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Gm3278L7N2D2 218 aa16.53■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Gm8271L7N2E2 218 aa16.53■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Pola2P33611 600 aa16.53■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 ItgadQ3V0T4 1168 aa16.53■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Dsg1aQ61495 1057 aa16.53■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Kcnk18Q6VV64 394 aa16.53■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 C2cd5Q7TPS5 1016 aaKnown RBP16.53■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Q8BGN9 141 aa16.53■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Rnf112Q96DY5 654 aa16.53■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Eps8l2Q99K30 729 aa16.53■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Tspan17Q9D7W4 270 aa16.53■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Btbd18A0A0A6YY25 723 aa16.52■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Kctd19Q562E2 927 aa16.52■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 CcnyQ8BGU5 341 aa16.52■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Serpina3bQ8BYY9 420 aa16.52■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Tbc1d10cQ8C9V1 444 aa16.52■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 AdigQ8R400 80 aa16.52■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Polr3eQ9CZT4 710 aa16.52■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Gins2Q9D600 185 aa16.52■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 JcadQ5DTX6 1320 aa16.52■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Gm3182K7N6T8 263 aa16.52■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Eif3dO70194 548 aaKnown RBP16.52■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Myl1P05977 188 aa16.52■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 TxnP10639 105 aaKnown RBP16.52■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 ArP19091 899 aa16.52■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Fen1P39749 378 aa16.52■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Capn13Q3UW68 665 aa16.52■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Nt5c2Q3V1L4 560 aa16.52■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Cage1Q5IR70 849 aa16.52■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Igdcc3Q8BQC3 813 aa16.52■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Mageb18Q8BQR7 327 aa16.52■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Cdk17Q8K0D0 523 aa16.52■□□□□ 0.24
Ccdc88b-201ENSMUST00000113440 Ccdc85aQ5SP85 500 aa16.52■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Map3k7Q62073 579 aa16.52■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Ece2Q80Z60 881 aa16.52■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Fgfr4Q03142 799 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Ppp2r5cQ60996 524 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Tph2Q8CGV2 488 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Thoc1Q8R3N6 657 aaKnown RBP16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Gmcl1Q920G9 524 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Tnni1Q9WUZ5 187 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Arap3Q8R5G7 1538 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Sycp3P70281 254 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Sin3bQ62141 1098 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Adam6bQ6IMH7 756 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Epc2Q8C0I4 808 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Lrrc14Q8VC16 493 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Upb1Q8VC97 393 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Trim10Q9WUH5 489 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 4930523C07RikE9Q2T4 99 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Magea1O89006 320 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Magea5O89009 320 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 AfmO89020 608 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Pou6f1Q07916 301 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Micall2Q3TN34 1009 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Wdr41Q3UDP0 460 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Fam92bQ3V2J0 292 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Dcaf8Q8N7N5 591 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Prl2c5Q9JLV9 222 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Tjp3Q9QXY1 905 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Magea2Q9R2A2 320 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Ddx60E9PZQ1 1711 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Lrriq4A6H6A4 596 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Cyp4f40G3UW81 524 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 VdrP48281 422 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Lrch1P62046 709 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 OtulinQ3UCV8 352 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Brd9Q3UQU0 596 aaKnown RBP16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Pja2Q80U04 707 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Zfp449Q8CB76 518 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Parp10Q8CIE4 960 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Sytl1Q99N80 567 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Gyg1Q9R062 333 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Topaz1E5FYH1 1653 aa16.51■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Atp2c2A7L9Z8 944 aa16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Ece1Q4PZA2 769 aa16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Cd180Q62192 661 aa16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Pla2g4cQ64GA5 597 aa16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Chtf18Q8BIW9 969 aa16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Drd5Q8BLD9 478 aa16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 AagabQ8R2R3 316 aa16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Dach1Q9QYB2 751 aa16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Rnf103Q9R1W3 683 aa16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Scgb2b19J3QM75 112 aa16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 PrkceP16054 737 aa16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 HpdP49429 393 aa16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 G3bp2P97379 482 aaKnown RBP16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Fam193bQ3U2K0 892 aa16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Oog4Q4G0C7 502 aa16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Snx19Q6P4T1 997 aa16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Vmn1r191Q8K4D0 298 aa16.5■□□□□ 0.23
Ccdc88b-201ENSMUST00000113440 Akr1c14Q91WT7 323 aa16.5■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms