RNA–Protein interactions for RNA: ENSMUST00000111051.9

Bdnf-210, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,125 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-210ENSMUST00000111051 Dars2Q8BIP0 653 aa8.94□□□□□ -0.98
Bdnf-210ENSMUST00000111051 3830417A13RikQ8BQJ2 303 aa8.94□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Nek8Q91ZR4 698 aa8.94□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Cttnbp2nlQ99LJ0 638 aa8.94□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Igf2bp3Q9CPN8 579 aaKnown RBP8.94□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Iqcf1Q9D9K8 182 aa8.94□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Mxra8Q9DBV4 442 aa8.94□□□□□ -0.98
Bdnf-210ENSMUST00000111051 RpgrQ9R0X5 1001 aa8.94□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Net1Q9Z206 595 aa8.94□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Fem1bQ9Z2G0 627 aa8.94□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Guca2bO09051 106 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Abi2P62484 446 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Trim43bP86448 445 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 PolnQ7TQ07 864 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Lrrc15Q80X72 579 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Pdik1lQ8QZR7 341 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Cpa5Q8R4H4 436 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 TarsQ9D0R2 722 aaKnown RBP8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 1700013H16RikQ9DAC5 291 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Itgb1bp2Q9R000 350 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Slc8a3S4R2P9 928 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Gm13084A2A8N0 494 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Bpifb9bA2AJD1 591 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 1700122O11RikJ3QPW6 241 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Sept7O55131 436 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Tnni3P48787 211 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 SnrpfP62307 86 aaKnown RBP8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Gsdmc4Q3TR54 480 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 OtulinQ3UCV8 352 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Fam92bQ3V2J0 292 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Atl2Q6PA06 583 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 SnphQ80U23 495 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Wnk4Q80UE6 1222 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 C2cd2lQ80X80 706 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Bpifb9aQ80XI7 591 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Fam204aQ8C6C7 236 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Abhd8Q8R0P8 439 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Sec63Q8VHE0 760 aaKnown RBP8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Setd3Q91WC0 594 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Rabep2Q91WG2 554 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Pcdhgb4Q91XX6 912 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Gbp7Q91Z40 638 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Dqx1Q924H9 718 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Pdxdc1Q99K01 787 aaKnown RBP8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Vwa5aQ99KC8 793 aaKnown RBP8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 HnrnpcQ9Z204 313 aaKnown RBP8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Znf638Q61464 1960 aaKnown RBP8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Lama4P97927 1816 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Fam205aA2APU8 1308 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Flt1P35969 1333 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Myh1Q5SX40 1942 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 1700003F12RikA2AKE5 210 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 UrosP51163 265 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 YwhagP61982 247 aaKnown RBP8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Spag6Q3V0U9 509 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Phactr4Q501J7 694 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Q6DFW0 481 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Tmc3Q7TQ69 1130 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Med10Q9CXU0 135 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Pgm1Q9D0F9 562 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Fam173bQ9D1Z3 247 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Rasgef1cQ9D300 466 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Anxa9Q9JHQ0 345 aa8.93□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Siglec1Q62230 1695 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 FscbA1EGX6 1074 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Itpripl1A2ASA8 547 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Vti1aO89116 217 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Irf8P23611 424 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 VdrP48281 422 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Arl4cP61208 192 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Rit2P70425 217 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Uhmk1P97343 419 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Zscan2Q07230 614 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Cul4aQ3TCH7 759 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Tigd5Q499M4 642 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Rhox12Q4TU81 186 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Ankrd6Q69ZU8 712 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Pja2Q80U04 707 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Ece2Q80Z60 881 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Slc9b1Q8C0X2 565 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Uba6Q8C7R4 1053 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Ccdc65Q8VHI7 493 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Spats2lQ91WJ7 558 aaKnown RBP8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Psmg1Q9JK23 289 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Prss51A0A286YDY8 319 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Arhgef10lA2AWP8 1280 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Gm3095E9Q058 166 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Mxd3Q80US8 206 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Trpa1Q8BLA8 1125 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 A430089I19RikQ8C9W1 407 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Kat14Q8CID0 779 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Depdc1aQ8CIG0 804 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Oxnad1Q8VE38 311 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Bhmt2Q91WS4 363 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Ergic2Q9CR89 377 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Krt20Q9D312 431 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Scyl1Q9EQC5 806 aaKnown RBP8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Myoz2Q9JJW5 264 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Tfr2Q9JKX3 798 aa8.92□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Abca3Q8R420 1704 aa8.92□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms