RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Acad11Q80XL6 779 aa24.55■■□□□ 1.52
Scn1b-201ENSMUST00000098548 F13a1Q8BH61 732 aa24.55■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Vps36Q91XD6 386 aa24.55■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Fam76aQ922G2 307 aa24.55■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Q922R1 422 aa24.55■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Akirin1Q99LF1 191 aa24.55■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Six6os1Q9CTN5 574 aa24.55■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Spock2Q9ER58 423 aa24.55■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Wfdc1Q9ESH5 211 aa24.55■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Gm28042B7ZCM9 1014 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 PurbO35295 324 aaKnown RBP24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Tubb4bP68372 445 aaKnown RBP24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Mettl25Q6NXH8 597 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 IqceQ6PCQ0 778 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Sh3d21Q7TSG5 549 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 HomezQ80W88 542 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 1700001K19RikQ80ZT1 219 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 NcaphQ8C156 731 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Zbtb9Q8CDC7 459 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Scyl2Q8CFE4 930 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Znf467Q8JZL0 594 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 1700020D05RikQ99PB1 294 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Polr3eQ9CZT4 710 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 TtpalQ9D3D0 343 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Asah2Q9JHE3 756 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Scnn1bQ9WU38 638 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Gucy2dA0A0U1RPR8 1117 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Tbkbp1A2A9T0 611 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Calb1P12658 261 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Cd72P21855 354 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 SPINDOCQ05AH6 381 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Cyp3a11Q64459 504 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Slc38a7Q8BWH0 463 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 MtrrQ8C1A3 696 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Olfr390Q8VEZ7 311 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Calml4Q91WQ9 153 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Ino80bQ99PT3 375 aaKnown RBP24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Dusp6Q9DBB1 381 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Foxe3Q9QY14 288 aa24.54■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Pnpla5Q32LZ8 432 aa24.53■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Nxf2Q4ZGD8 691 aa24.53■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Hdac10Q6P3E7 666 aa24.53■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Tmem132aQ922P8 1018 aa24.53■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Asic2Q925H0 512 aa24.53■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Ptchd4B9EKX1 904 aa24.52■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Ccl26F8VQM2 93 aa24.52■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Gm3164L7N2B9 238 aa24.52■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Gm3264L7N2C5 238 aa24.52■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Paxbp1P58501 919 aa24.52■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Xkr4Q5GH67 647 aa24.52■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Ntan1Q64311 310 aa24.52■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Q6PD19 689 aa24.52■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Ttc7aQ8BGB2 858 aa24.52■■□□□ 1.52
Scn1b-201ENSMUST00000098548 TbckQ8BM85 762 aa24.52■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Hgh1Q8C3I8 393 aa24.52■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Acot11Q8VHQ9 594 aa24.52■■□□□ 1.52
Scn1b-201ENSMUST00000098548 FcrlaQ920A9 352 aa24.52■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Smyd3Q9CWR2 428 aa24.52■■□□□ 1.52
Scn1b-201ENSMUST00000098548 Gm3252E9PUT9 216 aa24.51■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Gm3468E9QAJ8 216 aa24.51■■□□□ 1.51
Scn1b-201ENSMUST00000098548 2610008E11RikG3X964 669 aa24.51■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Gimap9G3X987 291 aa24.51■■□□□ 1.51
Scn1b-201ENSMUST00000098548 PtenO08586 403 aa24.51■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Rnf19aP50636 840 aa24.51■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Hps5P59438 1126 aa24.51■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Tfdp1Q08639 410 aa24.51■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Asic3Q6X1Y6 530 aa24.51■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Slc9a9Q8BZ00 644 aa24.51■■□□□ 1.51
Scn1b-201ENSMUST00000098548 4933409G03RikQ8C5U0 320 aa24.51■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Zfp64Q99KE8 643 aa24.51■■□□□ 1.51
Scn1b-201ENSMUST00000098548 NapgQ9CWZ7 312 aa24.51■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Tlr5Q9JLF7 859 aa24.51■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Gyg1Q9R062 333 aa24.51■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Ttll8A4Q9F1 832 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Gm6133B2RY53 190 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 P01644 108 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 P01645 108 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 P01646 108 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 P01647 108 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Slc3a2P10852 526 aaKnown RBP24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 AcrP23578 436 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Krt86P97861 486 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Ccdc102aQ3TMW1 549 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Dpcr1Q3TNW5 500 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Wdr18Q4VBE8 431 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Taf3Q5HZG4 932 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Shc3Q61120 474 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Cct6bQ61390 531 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Ddx3yQ62095 658 aaKnown RBP24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Sema4bQ62179 823 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Kiaa0754Q69ZZ9 979 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Mbtd1Q6P5G3 631 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Zfp397Q7TNK4 527 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Celf4Q7TSY6 486 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Eif4a3Q91VC3 411 aaKnown RBP24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Serpina9Q9D7D2 418 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Cse1lQ9ERK4 971 aaKnown RBP24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 PalmdQ9JHU2 551 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Map2k5Q9WVS7 448 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Gm21973F6WEZ7 68 aa24.5■■□□□ 1.51
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms