RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Wfdc1Q9ESH5 211 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Cpsf3Q9QXK7 684 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Pramef17A2ASJ1 475 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Gimd1E9PW74 217 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Plekha5E9Q6H8 1269 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Calb1P12658 261 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Aldh1a1P24549 501 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Aimp1P31230 310 aaKnown RBP9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Mark3Q03141 753 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Znf800Q0VEE6 662 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Cyp11b1Q3TG86 501 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Styk1Q6J9G1 429 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Dusp11Q6NXK5 321 aaKnown RBP9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Cd300aQ6SJQ0 318 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Mrgprb8Q7TN51 330 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Fam109aQ8BH49 266 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Slc9b1Q8C0X2 565 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Rcor2Q8C796 523 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Wdr11Q8K1X1 1223 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Unc93b1Q8VCW4 598 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Rem2Q8VEL9 341 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Pcdha2Q91Y17 948 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Psmd6Q99JI4 389 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Ppp1r3aQ99MR9 1089 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Q9D2Q3 444 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Tube1Q9D6T1 475 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 B4galt4Q9JJ04 344 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 JmyQ9QXM1 983 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Tle2Q9WVB2 767 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Slc12a7Q9WVL3 1083 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Wdr46Q9Z0H1 622 aaKnown RBP9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Gm1993A6X8I0 212 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Otud7bB2RUR8 840 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 SlxD3Z347 212 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Gm10378F6XQQ1 160 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Gm10801F7C7Q0 168 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Gm8298J3QPI0 401 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Zfp457L7N1X4 647 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 AcrP23578 436 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Aldh2P47738 519 aaKnown RBP9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 4933416C03RikQ3V063 378 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Carmil2Q3V3V9 1296 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Ankrd40Q5SUE8 363 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Uimc1Q5U5Q9 727 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Nab2Q61127 525 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Dlg4Q62108 724 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Rpf1Q7TND5 349 aaKnown RBP9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 RimklbQ80WS1 387 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Slc9a7Q8BLV3 726 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Tmem260Q8BMD6 703 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Q8C5C9 218 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Scyl2Q8CFE4 930 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Ints4Q8CIM8 964 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Sppl3Q9CUS9 384 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Cndp2Q9D1A2 475 aaKnown RBP9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Klhl10Q9D5V2 608 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Rilpl1Q9JJC6 406 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Ddx25Q9QY15 484 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Tnfrsf10bQ9QZM4 381 aa9.62□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Tatdn2B7ZNL9 783 aaKnown RBP9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Nfxl1E9Q8I7 918 aaKnown RBP9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Ccl26F8VQM2 93 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 AfmO89020 608 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Pla2g4aP47713 748 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Tnnt2P50752 301 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Inpp5jP59644 1003 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Snx25Q3ZT31 840 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Zkscan4Q5SZT6 480 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 ChpfQ6IQX7 774 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 ClmnQ8C5W0 1052 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 AagabQ8R2R3 316 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 TraipQ8VIG6 470 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Grin3bQ91ZU9 1003 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Fam111aQ9D2L9 613 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Eef1gQ9D8N0 437 aaKnown RBP9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Cntnap3E9PY62 1287 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Pgrmc1O55022 195 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Casp14O89094 257 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 EgfP01132 1217 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 AgtP11859 477 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Pbx1P41778 430 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Ndufs6P52503 116 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Ppp3caP63328 521 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Gm5169Q5M8P2 212 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Ush1gQ80T11 461 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Cracr2bQ80ZJ8 394 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Slc9a9Q8BZ00 644 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Zfp120Q8BZW4 436 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Gm5591Q8CDK1 855 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Rftn2Q8CHX7 500 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 CutaQ9CQ89 177 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Tmem39aQ9CYC3 486 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Fthl17aQ9DAX0 182 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Mgea5Q9EQQ9 916 aa9.61□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Vmn2r121A2BE32 847 aa9.6□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Arhgef26D3YYY8 869 aa9.6□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Mmp15O54732 657 aa9.6□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 IapP03975 557 aa9.6□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Slc3a2P10852 526 aaKnown RBP9.6□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Rnf19aP50636 840 aa9.6□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms