RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Rhox12Q4TU81 186 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 CcnjlQ5SRT8 387 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Ccdc125Q5U465 500 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Ankrd13dQ6PD24 605 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Wnk4Q80UE6 1222 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Olfml3Q8BK62 406 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Actl9Q8CG27 415 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Cwf19l1Q8CI33 537 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Ints9Q8K114 658 aaKnown RBP16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Ttc1Q91Z38 292 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Cd2bp2Q9CWK3 342 aaKnown RBP16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Mipol1Q9D9F8 279 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Q9DA42 136 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Art2aP17981 287 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Xrcc5P27641 732 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Cdc25cP48967 447 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 GalcP54818 684 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Igsf9Q05BQ1 1179 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Ttc39dQ0VF76 604 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Gspt2Q149F3 632 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 GmncQ3URY2 333 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Serpinb1cQ5SV42 375 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 ChukQ60680 745 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 AlcamQ61490 583 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Ppp1r13bQ62415 1087 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Raver2Q7TPD6 673 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 PreplQ8C167 725 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Kcnv2Q8CFS6 562 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Slc26a7Q8R2Z3 656 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Trex1Q91XB0 314 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Lman1Q9D0F3 517 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Gpihbp1Q9D1N2 228 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Smchd1Q6P5D8 2007 aaKnown RBP16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Psme4Q5SSW2 1843 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Rfx8D3YU81 596 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 DgkkE9Q7N4 1118 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Ppp1r9aH3BJD6 1292 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Syt2P46097 422 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 LxnP70202 222 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 GclcP97494 637 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 ZufspQ3T9Z9 577 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 R3hdm4Q4VBF2 262 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 FancbQ5XJY6 703 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 P4ha1Q60715 534 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Tfe3Q64092 572 aaKnown RBP16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 PrimpolQ6P1E7 537 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Stambpl1Q76N33 436 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Rassf6Q80UQ2 353 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Fbxo43Q8CDI2 640 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Slc4a8Q8JZR6 1089 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Hars2Q99KK9 505 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Znf654Q9DAU9 571 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Myoz2Q9JJW5 264 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Ambra1A2AH22 1300 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Slfn8B1ARD8 910 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Unc13dB2RUP2 1085 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 1700018F24RikB2RW27 314 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Vmn2r63E9Q0K5 859 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Gm9268E9Q0M3 861 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Vmn2r62K7N712 859 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 RcvrnP34057 202 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Vps41Q5KU39 853 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Tmem132dQ76HP3 1097 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Tmc8Q7TN58 722 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Slc7a6osQ7TPE5 306 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Bst2Q8R2Q8 172 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Cdk9Q99J95 372 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Dph6Q9CQ28 267 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Trmt10bQ9D075 318 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Sdr42e1Q9D665 394 aa16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Ftsj3Q9DBE9 838 aaKnown RBP16.04■□□□□ 0.16
Nup54-201ENSMUST00000038514 Fyb2A2A995 729 aa16.03■□□□□ 0.16
Nup54-201ENSMUST00000038514 Prdm15E9Q8T2 1174 aa16.03■□□□□ 0.16
Nup54-201ENSMUST00000038514 4933406M09RikG3XA12 479 aa16.03■□□□□ 0.16
Nup54-201ENSMUST00000038514 4930544D05RikJ3QK56 214 aa16.03■□□□□ 0.16
Nup54-201ENSMUST00000038514 Map2k1P31938 393 aa16.03■□□□□ 0.16
Nup54-201ENSMUST00000038514 Sash1P59808 1230 aa16.03■□□□□ 0.16
Nup54-201ENSMUST00000038514 Pih1d3Q3KNI6 218 aa16.03■□□□□ 0.16
Nup54-201ENSMUST00000038514 RbakQ8BQC8 711 aa16.03■□□□□ 0.16
Nup54-201ENSMUST00000038514 Rtp1Q8C8C1 263 aa16.03■□□□□ 0.16
Nup54-201ENSMUST00000038514 MyripQ8K3I4 856 aa16.03■□□□□ 0.16
Nup54-201ENSMUST00000038514 HibchQ8QZS1 385 aa16.03■□□□□ 0.16
Nup54-201ENSMUST00000038514 Tom1l1Q923U0 474 aa16.03■□□□□ 0.16
Nup54-201ENSMUST00000038514 Pls3Q99K51 630 aa16.03■□□□□ 0.16
Nup54-201ENSMUST00000038514 Pard6bQ9JK83 371 aa16.03■□□□□ 0.16
Nup54-201ENSMUST00000038514 Ptgdr2Q9Z2J6 382 aa16.03■□□□□ 0.16
Nup54-201ENSMUST00000038514 Pds5aQ6A026 1332 aa16.03■□□□□ 0.16
Nup54-201ENSMUST00000038514 Usp35M0QWN7 1009 aa16.02■□□□□ 0.16
Nup54-201ENSMUST00000038514 Ebf2O08792 575 aa16.02■□□□□ 0.16
Nup54-201ENSMUST00000038514 Irf8P23611 424 aa16.02■□□□□ 0.16
Nup54-201ENSMUST00000038514 Hoxc13P50207 328 aa16.02■□□□□ 0.16
Nup54-201ENSMUST00000038514 Lrch1P62046 709 aa16.02■□□□□ 0.16
Nup54-201ENSMUST00000038514 Rit2P70425 217 aa16.02■□□□□ 0.16
Nup54-201ENSMUST00000038514 Erich4Q3UNU4 136 aa16.02■□□□□ 0.16
Nup54-201ENSMUST00000038514 Fbxo10Q7TQF2 950 aa16.02■□□□□ 0.16
Nup54-201ENSMUST00000038514 Ccdc50Q810U5 305 aaKnown RBP16.02■□□□□ 0.16
Nup54-201ENSMUST00000038514 Sun2Q8BJS4 731 aa16.02■□□□□ 0.16
Nup54-201ENSMUST00000038514 Kctd6Q8BNL5 237 aa16.02■□□□□ 0.16
Nup54-201ENSMUST00000038514 Zhx2Q8C0C0 836 aaKnown RBP16.02■□□□□ 0.16
Nup54-201ENSMUST00000038514 Emilin2Q8K482 1074 aa16.02■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms