RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Vwa5aQ99KC8 793 aaKnown RBP17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Micu3Q9CTY5 523 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Mrpl4Q9DCU6 294 aaKnown RBP17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 AfmO89020 608 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Got1P05201 413 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Kcnk18Q6VV64 394 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Mxd3Q80US8 206 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Ugp2Q91ZJ5 508 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Sapcd2Q9D818 391 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 MrgbpQ9DAT2 204 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 IkbipQ9DBZ1 373 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Atp13a1Q9EPE9 1200 aaKnown RBP17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Extl2Q9ES89 330 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 SynrgQ5SV85 1306 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Rbp3P49194 1234 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 NfixP70257 488 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Ppp4r3cQ3V0Y1 813 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Rhox12Q4TU81 186 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Atl2Q6PA06 583 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Glis3Q6XP49 780 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Rps6kc1Q8BLK9 1056 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Phactr3Q8BYK5 558 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Atxn7Q8R4I1 867 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Tbc1d22aQ8R5A6 516 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Gm5134E9QAB5 671 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Psmd14O35593 310 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Ino80dQ66JY2 873 aaKnown RBP17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Dnajc8Q6NZB0 253 aaKnown RBP17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Suds3Q8BR65 328 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 SowahdQ8BY98 327 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Afg3l1Q920A7 789 aaKnown RBP17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Fxr2Q9WVR4 673 aaKnown RBP17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Mt-CybP00158 381 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Capn13Q3UW68 665 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Nemp2Q8CB65 421 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Q8K2W9 541 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Twf1Q91YR1 350 aaKnown RBP17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Fuca2Q99KR8 461 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Nde1Q9CZA6 344 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 NfkbizQ9EST8 728 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Zbtb18Q9WUK6 522 aa17.56■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Raph1F2Z3U3 1266 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 NficP70255 439 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Vars2Q3U2A8 1060 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Spag6Q3V0U9 509 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Fhod1Q6P9Q4 1197 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Actl9Q8CG27 415 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Q8R1Y2 203 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Krtap5-3Q9D226 196 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 PtprmP28828 1452 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Ugt1a8D3Z748 530 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Ugt1a10E9PXN7 530 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Npy5rO70342 466 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Lrrc4bP0C192 709 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Igfbp4P47879 254 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Eif3eP60229 445 aaKnown RBP17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Ccdc138Q0VF22 680 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Gpc3Q8CFZ4 579 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 OtoaQ8K561 1137 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Slc26a4Q9R155 780 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Dip2cE9PWR4 1557 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Epha2Q03145 977 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Thrap3Q569Z6 951 aaKnown RBP17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Recql4Q75NR7 1216 aaKnown RBP17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Kif6E9PX57 802 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Pth1rP41593 591 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 LtbrP50284 415 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Chrna5Q2MKA5 467 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Zfp956Q3UZY6 572 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Klra7Q60654 280 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 HiraQ61666 1015 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Wdr35Q8BND3 1181 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 BrdtQ91Y44 956 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Chordc1Q9D1P4 331 aaKnown RBP17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Noxred1Q9D3S5 366 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Gstt4Q9D4P7 240 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Wdr64Q9D565 1086 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Ing2Q9ESK4 281 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Nme3Q9WV85 169 aa17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Orc1Q9Z1N2 840 aaKnown RBP17.55■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Top3aO70157 1003 aa17.54■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Kcnn2P58390 839 aa17.54■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Actr2P61161 394 aa17.54■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Rit2P70425 217 aa17.54■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Mark3Q03141 753 aa17.54■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Spata5Q3UMC0 893 aaKnown RBP17.54■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Myo6Q64331 1265 aa17.54■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Nlrp4fQ66X05 959 aa17.54■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Grm4Q68EF4 912 aa17.54■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 TxlngQ8BHN1 524 aa17.54■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Slfnl1Q8BHW9 410 aa17.54■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 AdigQ8R400 80 aa17.54■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Cyp2s1Q9DBX6 501 aa17.54■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 MycP01108 439 aa17.54■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 LxnP70202 222 aa17.54■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Aak1Q3UHJ0 959 aa17.54■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 A430089I19RikQ8C9W1 407 aa17.54■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 UvragQ8K245 698 aa17.54■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Sumf1Q8R0F3 372 aa17.54■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Gm28360A0A087WR25 190 aa17.54■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms