RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Chil3O35744 398 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Pdha1P35486 390 aaKnown RBP11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Eepd1Q3TGW2 569 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Odr4Q4PJX1 447 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Phc1Q64028 1012 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Rccd1Q8BTU7 377 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Hook3Q8BUK6 718 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Uba6Q8C7R4 1053 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Fbxl13Q8CDU4 790 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Dnajc3Q91YW3 504 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Cdk9Q99J95 372 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Iqcf1Q9D9K8 182 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Usp29Q9ES63 869 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Ecel1Q9JMI0 775 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Slc6a16A0A1L1SR47 742 aa11.02□□□□□ -0.64
Clip3-201ENSMUST00000014065 Taf4bG5E8Z2 855 aa11.02□□□□□ -0.64
Clip3-201ENSMUST00000014065 R3hdm4Q4VBF2 262 aa11.02□□□□□ -0.64
Clip3-201ENSMUST00000014065 Znf354cQ571J5 560 aa11.02□□□□□ -0.64
Clip3-201ENSMUST00000014065 Atp2b4Q6Q477 1205 aa11.02□□□□□ -0.64
Clip3-201ENSMUST00000014065 Ccdc169Q8BXX9 214 aa11.02□□□□□ -0.64
Clip3-201ENSMUST00000014065 Apol9bQ8C7I4 310 aa11.02□□□□□ -0.64
Clip3-201ENSMUST00000014065 Apol9aQ8VDU3 310 aa11.02□□□□□ -0.64
Clip3-201ENSMUST00000014065 NcaldQ91X97 193 aa11.02□□□□□ -0.64
Clip3-201ENSMUST00000014065 Trex1Q91XB0 314 aa11.02□□□□□ -0.64
Clip3-201ENSMUST00000014065 Cib2Q9Z309 187 aa11.02□□□□□ -0.64
Clip3-201ENSMUST00000014065 RptorQ8K4Q0 1335 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 GabreA2AMW3 916 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Ace3D0G895 737 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Mdm4O35618 489 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Atp2a2O55143 1044 aaKnown RBP11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Eef1bO70251 225 aaKnown RBP11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Tom1O88746 492 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 CopeO89079 308 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Bmp2P21274 394 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Akr1b7P21300 316 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Sem1P60897 70 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Gbp1Q01514 589 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Bpifb5Q3UQ05 490 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Grik5Q61626 979 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Tmc4Q7TQ65 694 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Sh3rf3Q8C120 878 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Med24Q99K74 987 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Hspbp1Q99P31 357 aaKnown RBP11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Asb11Q9CQ31 323 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Thumpd2Q9CZB3 528 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Gtf2h1Q9DBA9 547 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Cyth3O08967 399 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Ets2P15037 468 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Rab21P35282 222 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Ogfod1Q3U0K8 545 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Cnga4Q3UW12 575 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Naif1Q6PFD7 327 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Tmem117Q8BH18 514 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Atp2a1Q8R429 994 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Vps36Q91XD6 386 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Rnf135Q9CWS1 417 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Lrrc34Q9DAM1 415 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Hao1Q9WU19 370 aa11.02□□□□□ -0.65
Clip3-201ENSMUST00000014065 Heg1E9Q7X6 1337 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Gm5926E9PWJ8 236 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Aknad1E9Q8N6 675 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Rgsl1H3BL40 1073 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Slc27a2O35488 620 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 CatspereP0DP43 985 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Col6a1Q04857 1025 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Rnf113a2Q14B01 337 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 FaxcQ3UMF9 409 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Peg10Q7TN75 958 aaKnown RBP11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Wasf2Q8BH43 497 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Trpa1Q8BLA8 1125 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Nemp2Q8CB65 421 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Lrit1Q8K099 624 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Rev1Q920Q2 1249 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Setd6Q9CWY3 473 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Zbed3Q9D0L1 228 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Nsmce1Q9D720 266 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 JmyQ9QXM1 983 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Smok2bQ9QYZ3 484 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Smok2aQ9QYZ6 504 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Usp17lbE9Q9U0 468 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Cyp4f40G3UW81 524 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Eif3dO70194 548 aaKnown RBP11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Kif5aP33175 1027 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Hcls1P49710 486 aaKnown RBP11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Yy1Q00899 414 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Lmntd2Q0VET5 664 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Ccdc138Q0VF22 680 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Ankzf1Q80UU1 748 aaKnown RBP11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 SpidrQ8BGX7 933 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Fbxo28Q8BIG4 368 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Spdl1Q923A2 608 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Ddx24Q9ESV0 857 aaKnown RBP11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 FibpQ9JI19 357 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Tlr5Q9JLF7 859 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Mast2Q60592 1734 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 6030498E09RikB1AX85 169 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Gm7995L7N2E4 160 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Rad51bO35719 350 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 MyocO70624 490 aa11.01□□□□□ -0.65
Clip3-201ENSMUST00000014065 Ifnb1P01575 182 aa11.01□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms