RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Sh2d4aQ9D7V1 421 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Clca1Q9D7Z6 913 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 1700123K08RikQ9D991 295 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Mrpl4Q9DCU6 294 aaKnown RBP9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Atp10aO54827 1508 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gm382B1AXN3 1250 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Kcna2P63141 499 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Qrich1Q3UA37 777 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 NfrkbQ6PIJ4 1296 aaKnown RBP9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Olfr1415Q7TQS4 311 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Olfr1416Q8VGU4 312 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Cul3Q9JLV5 768 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 RecqlQ9Z129 648 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Kiaa1107Q80TK0 1369 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Pdzrn4E9PUZ9 1014 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gm7942L7N277 499 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Myl1P05977 188 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Atp9bP98195 1146 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Fam83bQ0VBM2 1012 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gm1604bQ3TRG0 118 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Odr4Q4PJX1 447 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Grid1Q61627 1009 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Xlr3cQ61806 226 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Madcam1Q61826 405 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Far2Q7TNT2 515 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Zbtb5Q7TQG0 670 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gpc3Q8CFZ4 579 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Cacnb1Q8R3Z5 597 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ces1Q8VCC2 565 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 MydgfQ9CPT4 166 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gtf2ird1Q9JI57 1104 aaKnown RBP9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ppp1r3fQ9JIG4 799 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Stk11Q9WTK7 436 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Simc1E9Q6E9 1354 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Adgrf5G5E8Q8 1348 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 TriqkB2B9E1 86 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Slc4a9E9PUP3 929 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Art2bO35975 289 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 UmpsP13439 481 aaKnown RBP9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Acot5Q6Q2Z6 421 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 KhnynQ80U38 671 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 4921511C20RikQ8BVT7 469 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ccz1Q8C1Y8 480 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ston1Q8CDJ8 730 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Mtmr1Q9Z2C4 669 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 TnrQ8BYI9 1358 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gm13023A2A8N2 498 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ace3D0G895 737 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ccdc24E9PUW8 296 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ccdc144bE9PVZ3 520 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Speer4cG3UXD1 256 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Stmn3O70166 180 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Zbtb7aO88939 569 aaKnown RBP9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 PuraP42669 321 aaKnown RBP9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 SftpdP50404 374 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Slc16a1P53986 493 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Kpnb1P70168 876 aaKnown RBP9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ccndbp1Q3TVC7 356 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ankrd34bQ3UUF8 508 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gm4952Q5FW57 296 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 SpdyaQ5IBH7 310 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Tfdp2Q64163 446 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Phka2Q8BWJ3 1235 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 PdxkQ8K183 312 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Appl1Q8K3H0 707 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Cox16Q9CR63 106 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Slxl1Q9D515 155 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Usp29Q9ES63 869 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 PtsQ9R1Z7 144 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Rps6kb2Q9Z1M4 485 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Flt1P35969 1333 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ifi206G3UZV2 921 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gm3182K7N6T8 263 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Rgs4O08899 205 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Aco1P28271 889 aaKnown RBP9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Lig1P37913 916 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Anxa5P48036 319 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Trim43cP86449 446 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Mark3Q03141 753 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Sdr16c6Q05A13 316 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Faf2Q3TDN2 445 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Rtl3Q6P1Y1 553 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 PreplQ8C167 725 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Mb21d2Q8C525 428 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Stx5Q8K1E0 355 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Grk2Q99MK8 689 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Kif19Q99PT9 997 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Rhobtb3Q9CTN4 611 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Castor1Q9CWQ8 331 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ttc33Q9D6K7 262 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Abhd2Q9QXM0 425 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Cbx8Q9QXV1 362 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Osbpl10S4R1M9 766 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Usp31E9Q6Y8 1344 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Il1rapl1P59823 695 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Pcsk1P63239 753 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 OsbpQ3B7Z2 805 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Vmn1r209Q5NC97 312 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Map2k2Q63932 401 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Fam167aQ6P1G6 215 aa9.65□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms