RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN4	YDL020C	YLR446W	Q06204	433 aa		3	□□□□□ -1.93
RPN4	YDL020C	YBL111C	Q3E7Y5	667 aa		3	□□□□□ -1.93
RPN4	YDL020C	LAG2	Q92325	660 aa		3	□□□□□ -1.93
RPN4	YDL020C	FLO11	P08640	1367 aa		3	□□□□□ -1.93
RPN4	YDL020C	CDC25	P04821	1589 aa		3	□□□□□ -1.93
RPN4	YDL020C	ARO1	P08566	1588 aa	Known RBP	3	□□□□□ -1.93
RPN4	YDL020C	GDB1	Q06625	1536 aa		3	□□□□□ -1.93
RPN4	YDL020C	ATP6	P00854	259 aa		3	□□□□□ -1.93
RPN4	YDL020C	DAL5	P15365	543 aa		3	□□□□□ -1.93
RPN4	YDL020C	HPR1	P17629	752 aa	Known RBP	3	□□□□□ -1.93
RPN4	YDL020C	ICL1	P28240	557 aa	Predicted RBP	3	□□□□□ -1.93
RPN4	YDL020C	YKL063C	P35725	167 aa		3	□□□□□ -1.93
RPN4	YDL020C	COQ5	P49017	307 aa		3	□□□□□ -1.93
RPN4	YDL020C	GMC1	Q04399	608 aa		3	□□□□□ -1.93
RPN4	YDL020C	BER1	Q06688	274 aa	Known RBP	3	□□□□□ -1.93
RPN4	YDL020C	ASR1	Q06834	288 aa		3	□□□□□ -1.93
RPN4	YDL020C	RRP42	Q12277	265 aa	Predicted RBP	3	□□□□□ -1.93
RPN4	YDL020C	FMP16	Q12497	93 aa		3	□□□□□ -1.93
RPN4	YDL020C	IQG1	Q12280	1495 aa		2.99	□□□□□ -1.93
RPN4	YDL020C	TY3B-I	Q7LHG5	1498 aa	Known RBP	2.99	□□□□□ -1.93
RPN4	YDL020C	AUS1	Q08409	1394 aa		2.99	□□□□□ -1.93
RPN4	YDL020C	RIB7	P33312	244 aa		2.99	□□□□□ -1.93
RPN4	YDL020C	ZRT3	P34240	503 aa		2.99	□□□□□ -1.93
RPN4	YDL020C	CAB3	P36076	571 aa		2.99	□□□□□ -1.93
RPN4	YDL020C	RPC37	P36121	282 aa		2.99	□□□□□ -1.93
RPN4	YDL020C	UFE1	P41834	346 aa		2.99	□□□□□ -1.93
RPN4	YDL020C	YOR292C	Q08743	309 aa		2.99	□□□□□ -1.93
RPN4	YDL020C	VIK1	Q12045	647 aa		2.99	□□□□□ -1.93
RPN4	YDL020C	TFC7	Q12415	435 aa		2.99	□□□□□ -1.93
RPN4	YDL020C	PRP46	Q12417	451 aa	Predicted RBP	2.99	□□□□□ -1.93
RPN4	YDL020C	PDR12	Q02785	1511 aa		2.98	□□□□□ -1.93
RPN4	YDL020C	NTE1	Q04958	1679 aa		2.98	□□□□□ -1.93
RPN4	YDL020C	CFT1	Q06632	1357 aa	Known RBP	2.98	□□□□□ -1.93
RPN4	YDL020C	SSA3	P09435	649 aa	Known RBP	2.98	□□□□□ -1.93
RPN4	YDL020C	FRS2	P15625	503 aa	Known RBP	2.98	□□□□□ -1.93
RPN4	YDL020C	IMP3	P32899	183 aa	Predicted RBP	2.98	□□□□□ -1.93
RPN4	YDL020C	TDA11	P38854	504 aa		2.98	□□□□□ -1.93
RPN4	YDL020C	MPP10	P47083	593 aa	Known RBP	2.98	□□□□□ -1.93
RPN4	YDL020C	GPN3	Q06543	272 aa		2.98	□□□□□ -1.93
RPN4	YDL020C	RRP36	Q12481	300 aa	Predicted RBP	2.98	□□□□□ -1.93
RPN4	YDL020C	YPR064W	Q12492	139 aa		2.98	□□□□□ -1.93
RPN4	YDL020C	RPO21	P04050	1733 aa	Known RBP	2.97	□□□□□ -1.93
RPN4	YDL020C	COX10	P21592	462 aa		2.97	□□□□□ -1.93
RPN4	YDL020C	IFM1	P25038	676 aa		2.97	□□□□□ -1.93
RPN4	YDL020C	ZIP1	P31111	875 aa		2.97	□□□□□ -1.93
RPN4	YDL020C	GPX1	P36014	167 aa		2.97	□□□□□ -1.93
RPN4	YDL020C	TPO5	P36029	618 aa		2.97	□□□□□ -1.93
RPN4	YDL020C	YBR062C	P38239	180 aa		2.97	□□□□□ -1.93
RPN4	YDL020C	SHQ1	P40486	507 aa	Predicted RBP	2.97	□□□□□ -1.93
RPN4	YDL020C	MIC19	P43594	170 aa		2.97	□□□□□ -1.93
RPN4	YDL020C	SEC13	Q04491	297 aa	Known RBP	2.97	□□□□□ -1.93
RPN4	YDL020C	ECM19	Q06011	112 aa		2.97	□□□□□ -1.93
RPN4	YDL020C	TAZ1	Q06510	381 aa		2.97	□□□□□ -1.93
RPN4	YDL020C	POM33	Q12164	279 aa		2.97	□□□□□ -1.93
RPN4	YDL020C	TRM10	Q12400	293 aa		2.97	□□□□□ -1.93
RPN4	YDL020C	DFM1	Q12743	341 aa	Known RBP	2.97	□□□□□ -1.93
RPN4	YDL020C	FUS3	P16892	353 aa	Known RBP	2.96	□□□□□ -1.94
RPN4	YDL020C	IME2	P32581	645 aa		2.96	□□□□□ -1.94
RPN4	YDL020C	YIA6	P40556	373 aa		2.96	□□□□□ -1.94
RPN4	YDL020C	FMP33	P46998	180 aa		2.96	□□□□□ -1.94
RPN4	YDL020C	RPN14	P53196	417 aa		2.96	□□□□□ -1.94
RPN4	YDL020C	RNY1	Q02933	434 aa	Known RBP	2.96	□□□□□ -1.94
RPN4	YDL020C	MRX8	Q05473	314 aa		2.96	□□□□□ -1.94
RPN4	YDL020C	YDL012C	Q12489	107 aa		2.96	□□□□□ -1.94
RPN4	YDL020C	MMS1	Q06211	1407 aa		2.96	□□□□□ -1.94
RPN4	YDL020C	YOR093C	Q12275	1648 aa		2.96	□□□□□ -1.94
RPN4	YDL020C	TFS1	P14306	219 aa		2.95	□□□□□ -1.94
RPN4	YDL020C	CDC13	P32797	924 aa	Known RBP	2.95	□□□□□ -1.94
RPN4	YDL020C	FRT2	P39734	528 aa		2.95	□□□□□ -1.94
RPN4	YDL020C	VAB2	P40003	282 aa		2.95	□□□□□ -1.94
RPN4	YDL020C	YIL054W	P40524	105 aa		2.95	□□□□□ -1.94
RPN4	YDL020C	EMC2	P47133	292 aa	Known RBP	2.95	□□□□□ -1.94
RPN4	YDL020C	YGL118C	P53132	145 aa		2.95	□□□□□ -1.94
RPN4	YDL020C	PEX30	Q06169	523 aa		2.95	□□□□□ -1.94
RPN4	YDL020C	TDH1	P00360	332 aa	Known RBP	2.95	□□□□□ -1.94
RPN4	YDL020C	ILV1	P00927	576 aa	Known RBP	2.95	□□□□□ -1.94
RPN4	YDL020C	CKA2	P19454	339 aa		2.95	□□□□□ -1.94
RPN4	YDL020C	YSR3	P23501	404 aa		2.95	□□□□□ -1.94
RPN4	YDL020C	RPB9	P27999	122 aa		2.95	□□□□□ -1.94
RPN4	YDL020C	MRPL6	P32904	214 aa		2.95	□□□□□ -1.94
RPN4	YDL020C	FRM2	P37261	193 aa		2.95	□□□□□ -1.94
RPN4	YDL020C	BDH1	P39714	382 aa		2.95	□□□□□ -1.94
RPN4	YDL020C	YPT32	P51996	222 aa	Known RBP	2.95	□□□□□ -1.94
RPN4	YDL020C	SPP2	Q02521	185 aa		2.95	□□□□□ -1.94
RPN4	YDL020C	DIB1	Q06819	143 aa	Predicted RBP	2.95	□□□□□ -1.94
RPN4	YDL020C	YDL211C	Q12121	372 aa		2.95	□□□□□ -1.94
RPN4	YDL020C	RPA190	P10964	1664 aa	Known RBP	2.95	□□□□□ -1.94
RPN4	YDL020C	LTE1	P07866	1435 aa		2.94	□□□□□ -1.94
RPN4	YDL020C	YSP2	Q06681	1438 aa		2.94	□□□□□ -1.94
RPN4	YDL020C	SKG6	P32900	734 aa	Predicted RBP	2.94	□□□□□ -1.94
RPN4	YDL020C	SPT4	P32914	102 aa	Predicted RBP	2.94	□□□□□ -1.94
RPN4	YDL020C	MRPL37	P36532	105 aa		2.94	□□□□□ -1.94
RPN4	YDL020C	OPY1	P38271	328 aa		2.94	□□□□□ -1.94
RPN4	YDL020C	MRX5	P47007	382 aa		2.94	□□□□□ -1.94
RPN4	YDL020C	YPL278C	Q08990	100 aa		2.94	□□□□□ -1.94
RPN4	YDL020C	RPP0	P05317	312 aa	Known RBP	2.93	□□□□□ -1.94
RPN4	YDL020C	GCG1	P32656	232 aa	Known RBP	2.93	□□□□□ -1.94
RPN4	YDL020C	CAX4	P53223	239 aa		2.93	□□□□□ -1.94
RPN4	YDL020C	DPP1	Q05521	289 aa		2.93	□□□□□ -1.94
RPN4	YDL020C	VPH2	P32341	215 aa		2.92	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 38.8 ms