RNA–Protein interactions for RNA: ENST00000642115.1

LINC02228-204, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,962 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-204ENST00000642115 ZNF333Q96JL9 665 aa16.85■□□□□ 0.29
LINC02228-204ENST00000642115 TRAPPC9Q96Q05 1148 aa16.85■□□□□ 0.29
LINC02228-204ENST00000642115 NDNQ99608 321 aa16.85■□□□□ 0.29
LINC02228-204ENST00000642115 KCNK9Q9NPC2 374 aa16.85■□□□□ 0.29
LINC02228-204ENST00000642115 BZW2Q9Y6E2 419 aaKnown RBP16.85■□□□□ 0.29
LINC02228-204ENST00000642115 STAT1P42224 750 aa16.85■□□□□ 0.29
LINC02228-204ENST00000642115 KNOP1Q1ED39 458 aaKnown RBP16.85■□□□□ 0.29
LINC02228-204ENST00000642115 C10orf76Q5T2E6 689 aa16.85■□□□□ 0.29
LINC02228-204ENST00000642115 VSTM1Q6UX27 236 aa16.85■□□□□ 0.29
LINC02228-204ENST00000642115 FAM47EQ6ZV65 393 aa16.85■□□□□ 0.29
LINC02228-204ENST00000642115 VSIG1Q86XK7 387 aa16.85■□□□□ 0.29
LINC02228-204ENST00000642115 SYCE1Q8N0S2 351 aa16.85■□□□□ 0.29
LINC02228-204ENST00000642115 REEP2Q9BRK0 252 aa16.85■□□□□ 0.29
LINC02228-204ENST00000642115 LRMDAQ9H2I8 198 aa16.85■□□□□ 0.29
LINC02228-204ENST00000642115 DHX36Q9H2U1 1008 aaKnown RBP16.85■□□□□ 0.29
LINC02228-204ENST00000642115 DNAJC17Q9NVM6 304 aaKnown RBP16.85■□□□□ 0.29
LINC02228-204ENST00000642115 TAS2R14Q9NYV8 317 aa16.85■□□□□ 0.29
LINC02228-204ENST00000642115 SUCLA2Q9P2R7 463 aaPredicted RBP16.85■□□□□ 0.29
LINC02228-204ENST00000642115 DCCP43146 1447 aa16.85■□□□□ 0.29
LINC02228-204ENST00000642115 NVLO15381 856 aaKnown RBP16.84■□□□□ 0.29
LINC02228-204ENST00000642115 TAL1P17542 331 aaPredicted RBP16.84■□□□□ 0.29
LINC02228-204ENST00000642115 MPP2Q14168 576 aa16.84■□□□□ 0.29
LINC02228-204ENST00000642115 ZC2HC1CQ53FD0 456 aaPredicted RBP16.84■□□□□ 0.29
LINC02228-204ENST00000642115 RBM12BQ8IXT5 1001 aaKnown RBP16.84■□□□□ 0.29
LINC02228-204ENST00000642115 ARHGEF26Q96DR7 871 aa16.84■□□□□ 0.29
LINC02228-204ENST00000642115 LBHD1Q9BQE6 289 aaPredicted RBP16.84■□□□□ 0.29
LINC02228-204ENST00000642115 DENND2DQ9H6A0 471 aaPredicted RBP16.84■□□□□ 0.29
LINC02228-204ENST00000642115 TXLNGQ9NUQ3 528 aa16.84■□□□□ 0.29
LINC02228-204ENST00000642115 CNOT7Q9UIV1 285 aaKnown RBP16.84■□□□□ 0.29
LINC02228-204ENST00000642115 ITGB4P16144 1822 aa16.84■□□□□ 0.29
LINC02228-204ENST00000642115 KIAA0391O15091 583 aaKnown RBP16.84■□□□□ 0.29
LINC02228-204ENST00000642115 NR3C1P04150 777 aa16.84■□□□□ 0.29
LINC02228-204ENST00000642115 PLCG2P16885 1265 aa16.84■□□□□ 0.29
LINC02228-204ENST00000642115 EPHB2P29323 1055 aa16.84■□□□□ 0.29
LINC02228-204ENST00000642115 GSTT1P30711 240 aa16.84■□□□□ 0.29
LINC02228-204ENST00000642115 MAGEA8P43361 318 aa16.84■□□□□ 0.29
LINC02228-204ENST00000642115 CACNA2D1P54289 1103 aa16.84■□□□□ 0.29
LINC02228-204ENST00000642115 PTENP60484 403 aa16.84■□□□□ 0.29
LINC02228-204ENST00000642115 MYBPC3Q14896 1274 aa16.84■□□□□ 0.29
LINC02228-204ENST00000642115 LONRF1Q17RB8 773 aa16.84■□□□□ 0.29
LINC02228-204ENST00000642115 KIAA1755Q5JYT7 1200 aa16.84■□□□□ 0.29
LINC02228-204ENST00000642115 DCAF12L1Q5VU92 463 aa16.84■□□□□ 0.29
LINC02228-204ENST00000642115 LINC00116Q8NCU8 138 aa16.84■□□□□ 0.29
LINC02228-204ENST00000642115 LNX1Q8TBB1 728 aaPredicted RBP16.84■□□□□ 0.29
LINC02228-204ENST00000642115 CKAP2Q8WWK9 683 aa16.84■□□□□ 0.29
LINC02228-204ENST00000642115 ARHGEF2Q92974 986 aaKnown RBP16.84■□□□□ 0.29
LINC02228-204ENST00000642115 RTFDC1Q9BY42 306 aaPredicted RBP16.84■□□□□ 0.29
LINC02228-204ENST00000642115 ESYT2A0FGR8 921 aa16.83■□□□□ 0.29
LINC02228-204ENST00000642115 TPP2P29144 1249 aaPredicted RBP16.83■□□□□ 0.29
LINC02228-204ENST00000642115 SERPINB4P48594 390 aa16.83■□□□□ 0.29
LINC02228-204ENST00000642115 PABPC1LQ4VXU2 614 aaKnown RBP16.83■□□□□ 0.29
LINC02228-204ENST00000642115 RNF43Q68DV7 783 aa16.83■□□□□ 0.29
LINC02228-204ENST00000642115 ARHGAP27Q6ZUM4 889 aa16.83■□□□□ 0.29
LINC02228-204ENST00000642115 SDCCAG8Q86SQ7 713 aaPredicted RBP16.83■□□□□ 0.29
LINC02228-204ENST00000642115 ERP27Q96DN0 273 aa16.83■□□□□ 0.29
LINC02228-204ENST00000642115 TGS1Q96RS0 853 aaKnown RBP16.83■□□□□ 0.29
LINC02228-204ENST00000642115 TBC1D10AQ9BXI6 508 aa16.83■□□□□ 0.29
LINC02228-204ENST00000642115 SIGLEC16A6NMB1 481 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 ATP9AO75110 1047 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 SLFN11Q7Z7L1 901 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 CATSPER3Q86XQ3 398 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 PALB2Q86YC2 1186 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 JAMLQ86YT9 394 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 AGGF1Q8N302 714 aaeCLIP16.83■□□□□ 0.28
LINC02228-204ENST00000642115 THAP2Q9H0W7 228 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 STMN4Q9H169 189 aaPredicted RBP16.83■□□□□ 0.28
LINC02228-204ENST00000642115 BHMT2Q9H2M3 363 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 ZWILCHQ9H900 591 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 PREBQ9HCU5 417 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 MTMR4Q9NYA4 1195 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 GRHL1Q9NZI5 618 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 KDM3AQ9Y4C1 1321 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 RIPK2O43353 540 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 ECEL1O95672 775 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 TRIM49P0CI25 452 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 TRIM49CP0CI26 452 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 CYP2J2P51589 502 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 EPHA7Q15375 998 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 CLEC4GQ6UXB4 293 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 DTNBP1Q96EV8 351 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 TMEM109Q9BVC6 243 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 KIAA1683Q9H0B3 1180 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 TMEM165Q9HC07 324 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 DMAP1Q9NPF5 467 aaPredicted RBP16.83■□□□□ 0.28
LINC02228-204ENST00000642115 PHF24Q9UPV7 400 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 DNM3Q9UQ16 869 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 PCDHGA4Q9Y5G9 962 aa16.83■□□□□ 0.28
LINC02228-204ENST00000642115 PNMA6FA0A0J9YX94 578 aa16.82■□□□□ 0.28
LINC02228-204ENST00000642115 KCNA3P22001 575 aa16.82■□□□□ 0.28
LINC02228-204ENST00000642115 HOXD13P35453 343 aa16.82■□□□□ 0.28
LINC02228-204ENST00000642115 KCNJ1P48048 391 aa16.82■□□□□ 0.28
LINC02228-204ENST00000642115 DRAP1Q14919 205 aaPredicted RBP16.82■□□□□ 0.28
LINC02228-204ENST00000642115 ZNF746Q6NUN9 644 aaPredicted RBP16.82■□□□□ 0.28
LINC02228-204ENST00000642115 BTNL9Q6UXG8 535 aa16.82■□□□□ 0.28
LINC02228-204ENST00000642115 TPTE2Q6XPS3 522 aa16.82■□□□□ 0.28
LINC02228-204ENST00000642115 ALG3Q92685 438 aa16.82■□□□□ 0.28
LINC02228-204ENST00000642115 OPTNQ96CV9 577 aa16.82■□□□□ 0.28
LINC02228-204ENST00000642115 HES6Q96HZ4 224 aa16.82■□□□□ 0.28
LINC02228-204ENST00000642115 XIRP1Q702N8 1843 aaKnown RBP16.82■□□□□ 0.28
LINC02228-204ENST00000642115 TNFAIP3P21580 790 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms