RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 GABPB1Q06547 395 aaPredicted RBP19.34■□□□□ 0.69
PHGDH-226ENST00000641756 C9orf131Q5VYM1 1079 aa19.34■□□□□ 0.69
PHGDH-226ENST00000641756 ERO1BQ86YB8 467 aa19.34■□□□□ 0.69
PHGDH-226ENST00000641756 FMNL3Q8IVF7 1028 aa19.34■□□□□ 0.69
PHGDH-226ENST00000641756 PROCA1Q8NCQ7 364 aaPredicted RBP19.34■□□□□ 0.69
PHGDH-226ENST00000641756 TAF4BQ92750 862 aa19.34■□□□□ 0.69
PHGDH-226ENST00000641756 CDCA5Q96FF9 252 aa19.34■□□□□ 0.69
PHGDH-226ENST00000641756 FAM84AQ96KN4 292 aa19.34■□□□□ 0.69
PHGDH-226ENST00000641756 GDAP1L1Q96MZ0 367 aa19.34■□□□□ 0.69
PHGDH-226ENST00000641756 OSGEPQ9NPF4 335 aa19.34■□□□□ 0.69
PHGDH-226ENST00000641756 ARHGAP28Q9P2N2 729 aa19.34■□□□□ 0.69
PHGDH-226ENST00000641756 A0A0A6YYK5 440 aaPredicted RBP19.33■□□□□ 0.69
PHGDH-226ENST00000641756 FARP2O94887 1054 aaPredicted RBP19.33■□□□□ 0.69
PHGDH-226ENST00000641756 DLATP10515 647 aaKnown RBP19.33■□□□□ 0.69
PHGDH-226ENST00000641756 YBX3P16989 372 aaKnown RBP eCLIP19.33■□□□□ 0.693e-7■□□□□ 9.3
PHGDH-226ENST00000641756 KRT39Q6A163 491 aa19.33■□□□□ 0.69
PHGDH-226ENST00000641756 GPD1LQ8N335 351 aa19.33■□□□□ 0.69
PHGDH-226ENST00000641756 PPM1KQ8N3J5 372 aa19.33■□□□□ 0.69
PHGDH-226ENST00000641756 ASAP3Q8TDY4 903 aa19.33■□□□□ 0.69
PHGDH-226ENST00000641756 PDE11AQ9HCR9 933 aa19.33■□□□□ 0.69
PHGDH-226ENST00000641756 ZCCHC17Q9NP64 241 aaKnown RBP19.33■□□□□ 0.69
PHGDH-226ENST00000641756 GSTTP1A0A1W2PQM5 241 aa19.33■□□□□ 0.68
PHGDH-226ENST00000641756 PGK2P07205 417 aa19.33■□□□□ 0.68
PHGDH-226ENST00000641756 EDNRBP24530 442 aa19.33■□□□□ 0.68
PHGDH-226ENST00000641756 TNNT3P45378 269 aaPredicted RBP19.33■□□□□ 0.68
PHGDH-226ENST00000641756 CYP24A1Q07973 514 aa19.33■□□□□ 0.68
PHGDH-226ENST00000641756 CCNI2Q6ZMN8 369 aaPredicted RBP19.33■□□□□ 0.68
PHGDH-226ENST00000641756 ANKRD13AQ8IZ07 590 aa19.33■□□□□ 0.68
PHGDH-226ENST00000641756 MFSD14AQ96MC6 490 aa19.33■□□□□ 0.68
PHGDH-226ENST00000641756 FBXL18Q96ME1 805 aa19.33■□□□□ 0.68
PHGDH-226ENST00000641756 KREMEN1Q96MU8 473 aa19.33■□□□□ 0.68
PHGDH-226ENST00000641756 PCYT2Q99447 389 aa19.33■□□□□ 0.68
PHGDH-226ENST00000641756 FAM213AQ9BRX8 229 aa19.33■□□□□ 0.68
PHGDH-226ENST00000641756 TMEM8AQ9HCN3 771 aa19.33■□□□□ 0.68
PHGDH-226ENST00000641756 RNF14Q9UBS8 474 aa19.33■□□□□ 0.68
PHGDH-226ENST00000641756 H3BQF6 201 aa19.32■□□□□ 0.68
PHGDH-226ENST00000641756 TMEM253P0C7T8 217 aa19.32■□□□□ 0.68
PHGDH-226ENST00000641756 BRDTQ58F21 947 aaPredicted RBP19.32■□□□□ 0.68
PHGDH-226ENST00000641756 DAAM2Q86T65 1068 aa19.32■□□□□ 0.68
PHGDH-226ENST00000641756 SLC35G2Q8TBE7 412 aa19.32■□□□□ 0.68
PHGDH-226ENST00000641756 TAS1R2Q8TE23 839 aa19.32■□□□□ 0.68
PHGDH-226ENST00000641756 CTNNBL1Q8WYA6 563 aaPredicted RBP19.32■□□□□ 0.68
PHGDH-226ENST00000641756 ARHGEF26Q96DR7 871 aa19.32■□□□□ 0.68
PHGDH-226ENST00000641756 TXNRD2Q9NNW7 524 aa19.32■□□□□ 0.68
PHGDH-226ENST00000641756 PMM2O15305 246 aa19.31■□□□□ 0.68
PHGDH-226ENST00000641756 SGPL1O95470 568 aa19.31■□□□□ 0.68
PHGDH-226ENST00000641756 LIG4P49917 911 aa19.31■□□□□ 0.68
PHGDH-226ENST00000641756 LY6KQ17RY6 165 aa19.31■□□□□ 0.68
PHGDH-226ENST00000641756 MAP9Q49MG5 647 aa19.31■□□□□ 0.68
PHGDH-226ENST00000641756 C8orf74Q6P047 294 aa19.31■□□□□ 0.68
PHGDH-226ENST00000641756 PEX26Q7Z412 305 aa19.31■□□□□ 0.68
PHGDH-226ENST00000641756 RPUSD2Q8IZ73 545 aaKnown RBP19.31■□□□□ 0.68
PHGDH-226ENST00000641756 THAP2Q9H0W7 228 aa19.31■□□□□ 0.68
PHGDH-226ENST00000641756 PLEKHA4Q9H4M7 779 aa19.31■□□□□ 0.68
PHGDH-226ENST00000641756 DHX33Q9H6R0 707 aaKnown RBP19.31■□□□□ 0.68
PHGDH-226ENST00000641756 ACP6Q9NPH0 428 aa19.31■□□□□ 0.68
PHGDH-226ENST00000641756 NCANO14594 1321 aa19.31■□□□□ 0.68
PHGDH-226ENST00000641756 IGKV6D-21A0A0A0MT36 114 aa19.31■□□□□ 0.68
PHGDH-226ENST00000641756 LRRIQ4A6NIV6 560 aa19.31■□□□□ 0.68
PHGDH-226ENST00000641756 SPDYE5A6NIY4 337 aa19.31■□□□□ 0.68
PHGDH-226ENST00000641756 GARTP22102 1010 aa19.31■□□□□ 0.68
PHGDH-226ENST00000641756 GLRA2P23416 452 aa19.31■□□□□ 0.68
PHGDH-226ENST00000641756 MCCD1P59942 119 aaPredicted RBP19.31■□□□□ 0.68
PHGDH-226ENST00000641756 TAF3Q5VWG9 929 aa19.31■□□□□ 0.68
PHGDH-226ENST00000641756 SLFN11Q7Z7L1 901 aa19.31■□□□□ 0.68
PHGDH-226ENST00000641756 TMC2Q8TDI7 906 aa19.31■□□□□ 0.68
PHGDH-226ENST00000641756 LMBR1Q8WVP7 490 aa19.31■□□□□ 0.68
PHGDH-226ENST00000641756 RFFLQ8WZ73 363 aa19.31■□□□□ 0.68
PHGDH-226ENST00000641756 CXCL11O14625 94 aa19.3■□□□□ 0.68
PHGDH-226ENST00000641756 GGPS1O95749 300 aa19.3■□□□□ 0.68
PHGDH-226ENST00000641756 NF2P35240 595 aa19.3■□□□□ 0.68
PHGDH-226ENST00000641756 TERF2Q15554 542 aa19.3■□□□□ 0.68
PHGDH-226ENST00000641756 Q3C1V9 767 aa19.3■□□□□ 0.68
PHGDH-226ENST00000641756 SV2AQ7L0J3 742 aa19.3■□□□□ 0.68
PHGDH-226ENST00000641756 VTI1AQ96AJ9 217 aa19.3■□□□□ 0.68
PHGDH-226ENST00000641756 PORCNQ9H237 461 aa19.3■□□□□ 0.68
PHGDH-226ENST00000641756 AGTPBP1Q9UPW5 1226 aa19.3■□□□□ 0.68
PHGDH-226ENST00000641756 CYP26A1O43174 497 aa19.3■□□□□ 0.68
PHGDH-226ENST00000641756 CEP104O60308 925 aa19.3■□□□□ 0.68
PHGDH-226ENST00000641756 STRN3Q13033 797 aa19.3■□□□□ 0.68
PHGDH-226ENST00000641756 LMBRD2Q68DH5 695 aaPredicted RBP19.3■□□□□ 0.68
PHGDH-226ENST00000641756 FBXL13Q8NEE6 735 aa19.3■□□□□ 0.68
PHGDH-226ENST00000641756 HELQQ8TDG4 1101 aa19.3■□□□□ 0.68
PHGDH-226ENST00000641756 SLC7A3Q8WY07 619 aa19.3■□□□□ 0.68
PHGDH-226ENST00000641756 CEP89Q96ST8 783 aa19.3■□□□□ 0.68
PHGDH-226ENST00000641756 RAB20Q9NX57 234 aa19.3■□□□□ 0.68
PHGDH-226ENST00000641756 STXBP5LQ9Y2K9 1186 aa19.3■□□□□ 0.68
PHGDH-226ENST00000641756 COQ4Q9Y3A0 265 aa19.3■□□□□ 0.68
PHGDH-226ENST00000641756 H0YCG3 227 aa19.29■□□□□ 0.68
PHGDH-226ENST00000641756 BUB1BO60566 1050 aaPredicted RBP19.29■□□□□ 0.68
PHGDH-226ENST00000641756 ARIH2O95376 493 aa19.29■□□□□ 0.68
PHGDH-226ENST00000641756 TCF7P36402 384 aaPredicted RBP19.29■□□□□ 0.68
PHGDH-226ENST00000641756 GPC3P51654 580 aa19.29■□□□□ 0.68
PHGDH-226ENST00000641756 STAT5BP51692 787 aa19.29■□□□□ 0.68
PHGDH-226ENST00000641756 MFAP3P55082 362 aa19.29■□□□□ 0.68
PHGDH-226ENST00000641756 NEDD9Q14511 834 aa19.29■□□□□ 0.68
PHGDH-226ENST00000641756 NOP9Q86U38 636 aaKnown RBP19.29■□□□□ 0.68
PHGDH-226ENST00000641756 NT5DC3Q86UY8 548 aa19.29■□□□□ 0.68
PHGDH-226ENST00000641756 SLC47A2Q86VL8 602 aa19.29■□□□□ 0.68
PHGDH-226ENST00000641756 FAM71AQ8IYT1 594 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms