RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 CEP89Q96ST8 783 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 ZNF577Q9BSK1 485 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 RHOBTB2Q9BYZ6 727 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 ATP6V0A4Q9HBG4 840 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 DZANK1Q9NVP4 752 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 SPG21Q9NZD8 308 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 WNT16Q9UBV4 365 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 VAV3Q9UKW4 847 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 NOL7Q9UMY1 257 aaKnown RBP8.29□□□□□ -1.08
PHGDH-225ENST00000641720 PCDHB6Q9Y5E3 794 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 GCN1Q92616 2671 aaKnown RBP8.29□□□□□ -1.08
PHGDH-225ENST00000641720 FREM2Q5SZK8 3169 aa8.28□□□□□ -1.08
PHGDH-225ENST00000641720 A0A0U1RQF3 1178 aa8.28□□□□□ -1.08
PHGDH-225ENST00000641720 SHISA7A6NL88 538 aa8.28□□□□□ -1.08
PHGDH-225ENST00000641720 HBP1O60381 514 aa8.28□□□□□ -1.08
PHGDH-225ENST00000641720 NEMFO60524 1076 aa8.28□□□□□ -1.08
PHGDH-225ENST00000641720 PSMD10O75832 226 aa8.28□□□□□ -1.08
PHGDH-225ENST00000641720 CLCN4P51793 760 aa8.28□□□□□ -1.08
PHGDH-225ENST00000641720 BCAR1P56945 870 aa8.28□□□□□ -1.08
PHGDH-225ENST00000641720 CALCRLQ16602 461 aa8.28□□□□□ -1.08
PHGDH-225ENST00000641720 RSPO4Q2I0M5 234 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-225ENST00000641720 SPOUT1Q5T280 376 aaKnown RBP8.28□□□□□ -1.08
PHGDH-225ENST00000641720 LRCH2Q5VUJ6 765 aa8.28□□□□□ -1.08
PHGDH-225ENST00000641720 TMC5Q6UXY8 1006 aa8.28□□□□□ -1.08
PHGDH-225ENST00000641720 C4orf32Q8N8J7 132 aa8.28□□□□□ -1.08
PHGDH-225ENST00000641720 CMASQ8NFW8 434 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-225ENST00000641720 RIN2Q8WYP3 895 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-225ENST00000641720 ZNF707Q96C28 371 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-225ENST00000641720 MYADMQ96S97 322 aa8.28□□□□□ -1.08
PHGDH-225ENST00000641720 PPP1R16BQ96T49 567 aa8.28□□□□□ -1.08
PHGDH-225ENST00000641720 SDF4Q9BRK5 362 aa8.28□□□□□ -1.08
PHGDH-225ENST00000641720 UNC45AQ9H3U1 944 aa8.28□□□□□ -1.08
PHGDH-225ENST00000641720 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.28□□□□□ -1.08
PHGDH-225ENST00000641720 RNF216Q9NWF9 866 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-225ENST00000641720 MAFBQ9Y5Q3 323 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-225ENST00000641720 ATG2BQ96BY7 2078 aa8.28□□□□□ -1.08
PHGDH-225ENST00000641720 PTPRDP23468 1912 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 CELSR3Q9NYQ7 3312 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 DENND3A2RUS2 1198 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 M0QZ92 97 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 GPR182O15218 404 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 CHMP2AO43633 222 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 GAS7O60861 476 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 LRRN2O75325 713 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 OR52Z1P0C646 297 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 IBSPP21815 317 aaPredicted RBP8.27□□□□□ -1.09
PHGDH-225ENST00000641720 SLC26A2P50443 739 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 CLCN3P51790 818 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 POLGP54098 1239 aaPredicted RBP8.27□□□□□ -1.09
PHGDH-225ENST00000641720 ATXN1P54253 815 aaKnown RBP8.27□□□□□ -1.09
PHGDH-225ENST00000641720 SPIRE1Q08AE8 756 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 FOXD4L6Q3SYB3 417 aaPredicted RBP8.27□□□□□ -1.09
PHGDH-225ENST00000641720 RILPL1Q5EBL4 403 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 ATAT1Q5SQI0 421 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 PHLDB3Q6NSJ2 640 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 B3GNT9Q6UX72 402 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 FOXD4L3Q6VB84 417 aaPredicted RBP8.27□□□□□ -1.09
PHGDH-225ENST00000641720 C15orf39Q6ZRI6 1047 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 CCDC149Q6ZUS6 474 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 DDX53Q86TM3 631 aaKnown RBP8.27□□□□□ -1.09
PHGDH-225ENST00000641720 VPS52Q8N1B4 723 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 HELQQ8TDG4 1101 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 RUBCNQ92622 972 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 IGSF21Q96ID5 467 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 MTMR9Q96QG7 549 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 USP28Q96RU2 1077 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 RIT2Q99578 217 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 NAP1L4Q99733 375 aaKnown RBP8.27□□□□□ -1.09
PHGDH-225ENST00000641720 DDX23Q9BUQ8 820 aaKnown RBP8.27□□□□□ -1.09
PHGDH-225ENST00000641720 TRAIPQ9BWF2 469 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 TEKT3Q9BXF9 490 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 MFSD1Q9H3U5 465 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 NRDE2Q9H7Z3 1164 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 SFXN1Q9H9B4 322 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 TBC1D17Q9HA65 648 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 IGSF9Q9P2J2 1179 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 EPS15L1Q9UBC2 864 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 DNAJB4Q9UDY4 337 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 PUF60Q9UHX1 559 aaKnown RBP8.27□□□□□ -1.09
PHGDH-225ENST00000641720 DBR1Q9UK59 544 aaKnown RBP8.27□□□□□ -1.09
PHGDH-225ENST00000641720 CLIC4Q9Y696 253 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 ANK1P16157 1881 aa8.27□□□□□ -1.09
PHGDH-225ENST00000641720 NUP210Q8TEM1 1887 aaPredicted RBP8.26□□□□□ -1.09
PHGDH-225ENST00000641720 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.26□□□□□ -1.09
PHGDH-225ENST00000641720 ANHXE9PGG2 379 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 EML1O00423 815 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 TBX3O15119 743 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 ZNF862O60290 1169 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 LILRB5O75023 590 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 CXCL14O95715 111 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 DCNP07585 359 aaKnown RBP8.26□□□□□ -1.09
PHGDH-225ENST00000641720 GALTP07902 379 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 CFHP08603 1231 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 CNPP09543 421 aaKnown RBP8.26□□□□□ -1.09
PHGDH-225ENST00000641720 SRFP11831 508 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 GPC3P51654 580 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 AFF1P51825 1210 aaKnown RBP8.26□□□□□ -1.09
PHGDH-225ENST00000641720 ATP2C1P98194 919 aaPredicted RBP8.26□□□□□ -1.09
PHGDH-225ENST00000641720 TBC1D8BQ0IIM8 1120 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 PTGDRQ13258 359 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms