RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	CCDC158	Q5M9N0	1113 aa		7.46	□□□□□ -1.22
CASC19-238	ENST00000641523	E4F1	Q66K89	784 aa	Predicted RBP	7.46	□□□□□ -1.22
CASC19-238	ENST00000641523	MBLAC2	Q68D91	279 aa		7.46	□□□□□ -1.22
CASC19-238	ENST00000641523	ZCCHC8	Q6NZY4	707 aa	Known RBP	7.46	□□□□□ -1.22
CASC19-238	ENST00000641523	LHFPL2	Q6ZUX7	228 aa		7.46	□□□□□ -1.22
CASC19-238	ENST00000641523	CREG2	Q8IUH2	290 aa		7.46	□□□□□ -1.22
CASC19-238	ENST00000641523	ITPRIP	Q8IWB1	547 aa		7.46	□□□□□ -1.22
CASC19-238	ENST00000641523	TMEM57	Q8N5G2	664 aa		7.46	□□□□□ -1.22
CASC19-238	ENST00000641523	SPATA5	Q8NB90	893 aa		7.46	□□□□□ -1.22
CASC19-238	ENST00000641523	ZFYVE21	Q9BQ24	234 aa		7.46	□□□□□ -1.22
CASC19-238	ENST00000641523	NOL10	Q9BSC4	688 aa	Known RBP	7.46	□□□□□ -1.22
CASC19-238	ENST00000641523	CHMP4B	Q9H444	224 aa	Known RBP	7.46	□□□□□ -1.22
CASC19-238	ENST00000641523	TCEAL9	Q9UHQ7	104 aa		7.46	□□□□□ -1.22
CASC19-238	ENST00000641523	ZNF112	Q9UJU3	913 aa		7.46	□□□□□ -1.22
CASC19-238	ENST00000641523	MROH7-TTC4	A0A0A0MT08	1334 aa		7.45	□□□□□ -1.22
CASC19-238	ENST00000641523		B4E1Z4	1266 aa		7.45	□□□□□ -1.22
CASC19-238	ENST00000641523	CYP26A1	O43174	497 aa		7.45	□□□□□ -1.22
CASC19-238	ENST00000641523	NPTXR	O95502	500 aa		7.45	□□□□□ -1.22
CASC19-238	ENST00000641523	SRGAP2C	P0DJJ0	459 aa		7.45	□□□□□ -1.22
CASC19-238	ENST00000641523	TCP10	Q12799	353 aa		7.45	□□□□□ -1.22
CASC19-238	ENST00000641523	KCNAB2	Q13303	367 aa		7.45	□□□□□ -1.22
CASC19-238	ENST00000641523	SKOR2	Q2VWA4	1001 aa	Predicted RBP	7.45	□□□□□ -1.22
CASC19-238	ENST00000641523	LBX2	Q6XYB7	198 aa		7.45	□□□□□ -1.22
CASC19-238	ENST00000641523	THAP5	Q7Z6K1	395 aa		7.45	□□□□□ -1.22
CASC19-238	ENST00000641523	ERC1	Q8IUD2	1116 aa		7.45	□□□□□ -1.22
CASC19-238	ENST00000641523	SSH3	Q8TE77	659 aa		7.45	□□□□□ -1.22
CASC19-238	ENST00000641523	ZKSCAN4	Q969J2	545 aa	Predicted RBP	7.45	□□□□□ -1.22
CASC19-238	ENST00000641523	PTCHD1	Q96NR3	888 aa		7.45	□□□□□ -1.22
CASC19-238	ENST00000641523	PTPN18	Q99952	460 aa		7.45	□□□□□ -1.22
CASC19-238	ENST00000641523	ATP13A1	Q9HD20	1204 aa		7.45	□□□□□ -1.22
CASC19-238	ENST00000641523	RPS6KL1	Q9Y6S9	549 aa		7.45	□□□□□ -1.22
CASC19-238	ENST00000641523	OTOF	Q9HC10	1997 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	CEP290	O15078	2479 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	GPR75-ASB3	A0A0A6YYF3	556 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	PNMA6E	A0A0J9YXQ4	647 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	ARVCF	O00192	962 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	CXCL11	O14625	94 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	TLR2	O60603	784 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	SURF6	O75683	361 aa	Known RBP	7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	BAG3	O95817	575 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	APP	P05067	770 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	BTD	P43251	543 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	RGS3	P49796	1198 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	GSK3A	P49840	483 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	PRMT2	P55345	433 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	SOX10	P56693	466 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	ATP8B2	P98198	1209 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	TTC39A	Q5SRH9	613 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	IQCE	Q6IPM2	695 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	RNF111	Q6ZNA4	994 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	MIGA2	Q7L4E1	593 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	OTOP1	Q7RTM1	612 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	ANKRD23	Q86SG2	305 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	NBPF11	Q86T75	865 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	ZC3H7A	Q8IWR0	971 aa	Known RBP	7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	IGSF22	Q8N9C0	903 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	PCDH19	Q8TAB3	1148 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	NETO1	Q8TDF5	533 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	PARK7	Q99497	189 aa	Known RBP	7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	MMP19	Q99542	508 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	R3HDML	Q9H3Y0	253 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	RAI14	Q9P0K7	980 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	HMG20B	Q9P0W2	317 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	PCDHA2	Q9Y5H9	948 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	RFX7	Q2KHR2	1363 aa		7.44	□□□□□ -1.22
CASC19-238	ENST00000641523	TMEM82	A0PJX8	343 aa		7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	ALG1L2	C9J202	215 aa		7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	CTNND1	O60716	968 aa	Known RBP	7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	GLRX3	O76003	335 aa	Known RBP	7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	COL2A1	P02458	1487 aa	Predicted RBP	7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	ESR1	P03372	595 aa		7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	CPE	P16870	476 aa		7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	NAT1	P18440	290 aa		7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	RPL10	P27635	214 aa	Known RBP	7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	HOXD10	P28358	340 aa		7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	GUCY2F	P51841	1108 aa		7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	MECOM	Q03112	1051 aa		7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	LAPTM5	Q13571	262 aa		7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	DHCR24	Q15392	516 aa		7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	IFI16	Q16666	785 aa	Known RBP	7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	PLA2G4E	Q3MJ16	856 aa		7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	ATRNL1	Q5VV63	1379 aa		7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	FASTKD5	Q7L8L6	764 aa	Known RBP	7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	DDX53	Q86TM3	631 aa	Known RBP	7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	SCYL3	Q8IZE3	742 aa		7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	FAM43A	Q8N2R8	423 aa		7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	NAT16	Q8N8M0	369 aa		7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	CEP89	Q96ST8	783 aa		7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	PPARGC1A	Q9UBK2	798 aa	Known RBP	7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	ZC3H7B	Q9UGR2	993 aa	Known RBP	7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	PTPN22	Q9Y2R2	807 aa		7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	COQ6	Q9Y2Z9	468 aa		7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	FPGT-TNNI3K	V9GXZ4	949 aa		7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	HTT	P42858	3142 aa		7.43	□□□□□ -1.22
CASC19-238	ENST00000641523	TMEM265	A0A087WTH1	108 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	BTBD19	C9JJ37	291 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	HMMR	O75330	724 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	CKM	P06732	381 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	TEK	Q02763	1124 aa		7.42	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms