RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 CCL16O15467 120 aa8.83□□□□□ -1
PHGDH-217ENST00000641455 DHX15O43143 795 aaKnown RBP8.83□□□□□ -1
PHGDH-217ENST00000641455 FOXD2O60548 495 aaPredicted RBP8.83□□□□□ -1
PHGDH-217ENST00000641455 ZNF623O75123 536 aa8.83□□□□□ -1
PHGDH-217ENST00000641455 NR1I2O75469 434 aa8.83□□□□□ -1
PHGDH-217ENST00000641455 FAM86B2P0C5J1 330 aa8.83□□□□□ -1
PHGDH-217ENST00000641455 C1QTNF9P0C862 333 aa8.83□□□□□ -1
PHGDH-217ENST00000641455 RPL17P18621 184 aaKnown RBP8.83□□□□□ -1
PHGDH-217ENST00000641455 SREBF1P36956 1147 aa8.83□□□□□ -1
PHGDH-217ENST00000641455 DNM2P50570 870 aa8.83□□□□□ -1
PHGDH-217ENST00000641455 CCR3P51677 355 aa8.83□□□□□ -1
PHGDH-217ENST00000641455 AFF1P51825 1210 aaKnown RBP8.83□□□□□ -1
PHGDH-217ENST00000641455 ANTXR2P58335 489 aa8.83□□□□□ -1
PHGDH-217ENST00000641455 DSG1Q02413 1049 aa8.83□□□□□ -1
PHGDH-217ENST00000641455 DRP2Q13474 957 aa8.83□□□□□ -1
PHGDH-217ENST00000641455 MTERF2Q49AM1 385 aa8.83□□□□□ -1
PHGDH-217ENST00000641455 PPM1LQ5SGD2 360 aa8.83□□□□□ -1
PHGDH-217ENST00000641455 WWC2Q6AWC2 1192 aa8.83□□□□□ -1
PHGDH-217ENST00000641455 UNQ6494/PRO21346Q6UXR6 183 aa8.83□□□□□ -1
PHGDH-217ENST00000641455 AGMOQ6ZNB7 445 aa8.83□□□□□ -1
PHGDH-217ENST00000641455 CEP68Q76N32 757 aa8.83□□□□□ -1
PHGDH-217ENST00000641455 RHPN2Q8IUC4 686 aa8.83□□□□□ -1
PHGDH-217ENST00000641455 ITFG1Q8TB96 612 aa8.83□□□□□ -1
PHGDH-217ENST00000641455 IGDCC4Q8TDY8 1250 aa8.83□□□□□ -1
PHGDH-217ENST00000641455 NLRP4Q96MN2 994 aa8.83□□□□□ -1
PHGDH-217ENST00000641455 RIC8AQ9NPQ8 531 aa8.83□□□□□ -1
PHGDH-217ENST00000641455 HEBP1Q9NRV9 189 aa8.83□□□□□ -1
PHGDH-217ENST00000641455 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.83□□□□□ -1
PHGDH-217ENST00000641455 TBC1D22BQ9NU19 505 aa8.83□□□□□ -1
PHGDH-217ENST00000641455 SEPT9Q9UHD8 586 aaPredicted RBP8.83□□□□□ -1
PHGDH-217ENST00000641455 WDR81Q562E7 1941 aa8.82□□□□□ -1
PHGDH-217ENST00000641455 SOBPA7XYQ1 873 aa8.82□□□□□ -1
PHGDH-217ENST00000641455 WDR64B1ANS9 1081 aa8.82□□□□□ -1
PHGDH-217ENST00000641455 CHURC1-FNTBB4DL54 471 aa8.82□□□□□ -1
PHGDH-217ENST00000641455 F8W810 466 aa8.82□□□□□ -1
PHGDH-217ENST00000641455 CHMP2AO43633 222 aa8.82□□□□□ -1
PHGDH-217ENST00000641455 XYLBO75191 536 aa8.82□□□□□ -1
PHGDH-217ENST00000641455 CALM1P0DP23 149 aa8.82□□□□□ -1
PHGDH-217ENST00000641455 CALM2P0DP24 149 aa8.82□□□□□ -1
PHGDH-217ENST00000641455 CALM3P0DP25 149 aa8.82□□□□□ -1
PHGDH-217ENST00000641455 FNTBP49356 437 aa8.82□□□□□ -1
PHGDH-217ENST00000641455 CDC42EP1Q00587 391 aa8.82□□□□□ -1
PHGDH-217ENST00000641455 SETQ01105 290 aaPredicted RBP8.82□□□□□ -1
PHGDH-217ENST00000641455 SRSF5Q13243 272 aaKnown RBP8.82□□□□□ -1
PHGDH-217ENST00000641455 AP3B2Q13367 1082 aa8.82□□□□□ -1
PHGDH-217ENST00000641455 JAKMIP3Q5VZ66 844 aa8.82□□□□□ -1
PHGDH-217ENST00000641455 HEATR6Q6AI08 1181 aaKnown RBP8.82□□□□□ -1
PHGDH-217ENST00000641455 B4GALNT3Q6L9W6 998 aa8.82□□□□□ -1
PHGDH-217ENST00000641455 ZNF410Q86VK4 478 aa8.82□□□□□ -1
PHGDH-217ENST00000641455 ING5Q8WYH8 240 aa8.82□□□□□ -1
PHGDH-217ENST00000641455 COLEC11Q9BWP8 271 aa8.82□□□□□ -1
PHGDH-217ENST00000641455 IL25Q9H293 177 aa8.82□□□□□ -1
PHGDH-217ENST00000641455 CHRDQ9H2X0 955 aa8.82□□□□□ -1
PHGDH-217ENST00000641455 SUCLA2Q9P2R7 463 aaPredicted RBP8.82□□□□□ -1
PHGDH-217ENST00000641455 TAF6LQ9Y6J9 622 aa8.82□□□□□ -1
PHGDH-217ENST00000641455 ZFYVE26Q68DK2 2539 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 IGLV3-22A0A075B6J6 115 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 SMCO2A6NFE2 343 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 PRC1O43663 620 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 ZNF862O60290 1169 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 C8AP07357 584 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 HNRNPA1P09651 372 aaKnown RBP eCLIP8.81□□□□□ -1
PHGDH-217ENST00000641455 TDGF1P13385 188 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 ITGA4P13612 1032 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 NCLP19338 710 aaKnown RBP8.81□□□□□ -1
PHGDH-217ENST00000641455 CXCL12P48061 93 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 CREMQ03060 361 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 FOXC1Q12948 553 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 SF3A2Q15428 464 aaKnown RBP8.81□□□□□ -1
PHGDH-217ENST00000641455 CCDC6Q16204 474 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 UGCGQ16739 394 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 USP41Q3LFD5 358 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 PRR16Q569H4 304 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 TYW1BQ6NUM6 668 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 PPP1R18Q6NYC8 613 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 FUT10Q6P4F1 479 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 TMTC3Q6ZXV5 915 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 MICU3Q86XE3 530 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 MB21D2Q8IYB1 491 aaPredicted RBP8.81□□□□□ -1
PHGDH-217ENST00000641455 COLGALT2Q8IYK4 626 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 IER2Q9BTL4 223 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 APOL6Q9BWW8 343 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 LMAN1LQ9HAT1 526 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 DISC1Q9NRI5 854 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 AGPAT5Q9NUQ2 364 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 FBXW11Q9UKB1 542 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 SLC12A7Q9Y666 1083 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 SDK1Q7Z5N4 2213 aa8.81□□□□□ -1
PHGDH-217ENST00000641455 TDRD15B5MCY1 1934 aaKnown RBP8.8□□□□□ -1
PHGDH-217ENST00000641455 MAN2B1O00754 1011 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 HRO43593 1189 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 KCNK5O95279 499 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 PAPLNO95428 1278 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 C1RP00736 705 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 MLH1P40692 756 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 SCNN1GP51170 649 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 SATB1Q01826 763 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 PTH1RQ03431 593 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 FZD5Q13467 585 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 PABPC1LQ4VXU2 614 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms