RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.74□□□□□ -0.05
SCARB2-227ENST00000640957 MYH3P11055 1940 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.74□□□□□ -0.05
SCARB2-227ENST00000640957 LAD1O00515 517 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 GNAQP50148 359 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 KLC1Q07866 573 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 MDH1BQ5I0G3 518 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 FOXB2Q5VYV0 432 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 ASRGL1Q7L266 308 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 SYN2Q92777 582 aaPredicted RBP14.74□□□□□ -0.05
SCARB2-227ENST00000640957 EZH1Q92800 747 aaPredicted RBP14.74□□□□□ -0.05
SCARB2-227ENST00000640957 MTMR9Q96QG7 549 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 CYTH2Q99418 400 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 SPOPO43791 374 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 COMTP21964 271 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 PPP1R2P41236 205 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 MTMR2Q13614 643 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 SYCE1Q8N0S2 351 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 HAS1Q92839 578 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 FAM84AQ96KN4 292 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 LRRC37BQ96QE4 947 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 UBE2OQ9C0C9 1292 aaKnown RBP14.74□□□□□ -0.05
SCARB2-227ENST00000640957 KCTD10Q9H3F6 313 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 MAGEF1Q9HAY2 307 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 NKIRAS1Q9NYS0 192 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 SH3BP1Q9Y3L3 701 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 GOLGA8RI6L899 631 aa14.73□□□□□ -0.05
SCARB2-227ENST00000640957 LUC7L3O95232 432 aaKnown RBP14.73□□□□□ -0.05
SCARB2-227ENST00000640957 SSTR3P32745 418 aaPredicted RBP14.73□□□□□ -0.05
SCARB2-227ENST00000640957 ICA1Q05084 483 aa14.73□□□□□ -0.05
SCARB2-227ENST00000640957 SETDB1Q15047 1291 aa14.73□□□□□ -0.05
SCARB2-227ENST00000640957 RCN1Q15293 331 aa14.73□□□□□ -0.05
SCARB2-227ENST00000640957 C12orf60Q5U649 245 aa14.73□□□□□ -0.05
SCARB2-227ENST00000640957 ZNF804AQ7Z570 1209 aa14.73□□□□□ -0.05
SCARB2-227ENST00000640957 COL23A1Q86Y22 540 aaPredicted RBP14.73□□□□□ -0.05
SCARB2-227ENST00000640957 STK32AQ8WU08 396 aa14.73□□□□□ -0.05
SCARB2-227ENST00000640957 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.73□□□□□ -0.05
SCARB2-227ENST00000640957 CEP95Q96GE4 821 aa14.73□□□□□ -0.05
SCARB2-227ENST00000640957 EDEM3Q9BZQ6 932 aa14.73□□□□□ -0.05
SCARB2-227ENST00000640957 NMRK1Q9NWW6 199 aa14.73□□□□□ -0.05
SCARB2-227ENST00000640957 COL18A1P39060 1754 aa14.73□□□□□ -0.05
SCARB2-227ENST00000640957 USP54Q70EL1 1684 aa14.73□□□□□ -0.05
SCARB2-227ENST00000640957 RASA4BC9J798 803 aa14.73□□□□□ -0.05
SCARB2-227ENST00000640957 RASA4O43374 803 aa14.73□□□□□ -0.05
SCARB2-227ENST00000640957 MED24O75448 989 aa14.73□□□□□ -0.05
SCARB2-227ENST00000640957 FTLP02792 175 aaPredicted RBP14.73□□□□□ -0.05
SCARB2-227ENST00000640957 FESP07332 822 aa14.73□□□□□ -0.05
SCARB2-227ENST00000640957 LDHCP07864 332 aa14.73□□□□□ -0.05
SCARB2-227ENST00000640957 PTGIRP43119 386 aa14.73□□□□□ -0.05
SCARB2-227ENST00000640957 CDK8P49336 464 aa14.73□□□□□ -0.05
SCARB2-227ENST00000640957 SF3B3Q15393 1217 aaKnown RBP14.73□□□□□ -0.05
SCARB2-227ENST00000640957 TBC1D25Q3MII6 688 aa14.73□□□□□ -0.05
SCARB2-227ENST00000640957 TAF1BQ53T94 588 aaPredicted RBP14.73□□□□□ -0.05
SCARB2-227ENST00000640957 LLGL2Q6P1M3 1020 aa14.73□□□□□ -0.05
SCARB2-227ENST00000640957 PRR11Q96HE9 360 aaPredicted RBP14.73□□□□□ -0.05
SCARB2-227ENST00000640957 NPHS2Q9NP85 383 aa14.73□□□□□ -0.05
SCARB2-227ENST00000640957 UBN1Q9NPG3 1134 aa14.73□□□□□ -0.05
SCARB2-227ENST00000640957 SH3GLB2Q9NR46 395 aa14.73□□□□□ -0.05
SCARB2-227ENST00000640957 STK17AQ9UEE5 414 aa14.73□□□□□ -0.05
SCARB2-227ENST00000640957 CFAP69A5D8W1 941 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 ATP9AO75110 1047 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 RTN3O95197 1032 aaPredicted RBP14.72□□□□□ -0.05
SCARB2-227ENST00000640957 FERP16591 822 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 CYP11B2P19099 503 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 NMT1P30419 496 aaKnown RBP14.72□□□□□ -0.05
SCARB2-227ENST00000640957 EPC2Q52LR7 807 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 ARSHQ5FYA8 562 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 RASIP1Q5U651 963 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 RPUSD2Q8IZ73 545 aaKnown RBP14.72□□□□□ -0.05
SCARB2-227ENST00000640957 SCYL3Q8IZE3 742 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 WDR66Q8TBY9 1149 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 KAT5Q92993 513 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 MKNK1Q9BUB5 465 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 RUSC1Q9BVN2 902 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 LNPEPQ9UIQ6 1025 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 NUMBLQ9Y6R0 609 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 PALM3A6NDB9 673 aaPredicted RBP14.72□□□□□ -0.05
SCARB2-227ENST00000640957 FOXN3O00409 490 aaPredicted RBP14.72□□□□□ -0.05
SCARB2-227ENST00000640957 OAS1P00973 400 aaKnown RBP14.72□□□□□ -0.05
SCARB2-227ENST00000640957 GYS1P13807 737 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 GNAZP19086 355 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 HOXD13P35453 343 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 RRP1BQ14684 758 aaKnown RBP14.72□□□□□ -0.05
SCARB2-227ENST00000640957 KCTD1Q719H9 257 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 SLC30A5Q8TAD4 765 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 BORCS6Q96GS4 357 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 SH2D3AQ9BRG2 576 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 TMEM165Q9HC07 324 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 TTC7AQ9ULT0 858 aaPredicted RBP14.72□□□□□ -0.05
SCARB2-227ENST00000640957 NAALADL1Q9UQQ1 740 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 AHCYL1O43865 530 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 KCNA3P22001 575 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 CBWD6Q4V339 395 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 CBWD3Q5JTY5 395 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 CBWD5Q5RIA9 395 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 DPP8Q6V1X1 898 aaPredicted RBP14.72□□□□□ -0.05
SCARB2-227ENST00000640957 MTDHQ86UE4 582 aaKnown RBP14.72□□□□□ -0.05
SCARB2-227ENST00000640957 SYCP3Q8IZU3 236 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 LRRC8CQ8TDW0 803 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 RFFLQ8WZ73 363 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms