RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 PFDN4Q9NQP4 134 aa18.75■□□□□ 0.59
SCARB2-223ENST00000640640 NUGGCQ68CJ6 796 aa18.74■□□□□ 0.59
SCARB2-223ENST00000640640 GDAP1Q8TB36 358 aa18.74■□□□□ 0.59
SCARB2-223ENST00000640640 CCDC68Q9H2F9 335 aa18.74■□□□□ 0.59
SCARB2-223ENST00000640640 IP6K2Q9UHH9 426 aa18.74■□□□□ 0.59
SCARB2-223ENST00000640640 EFCAB13Q8IY85 973 aa18.74■□□□□ 0.59
SCARB2-223ENST00000640640 NCAPGQ9BPX3 1015 aa18.74■□□□□ 0.59
SCARB2-223ENST00000640640 LCMT1Q9UIC8 334 aa18.74■□□□□ 0.59
SCARB2-223ENST00000640640 ASB14A6NK59 587 aa18.74■□□□□ 0.59
SCARB2-223ENST00000640640 CTIFO43310 598 aaKnown RBP18.74■□□□□ 0.59
SCARB2-223ENST00000640640 KLRC1P26715 233 aa18.74■□□□□ 0.59
SCARB2-223ENST00000640640 SREBF1P36956 1147 aa18.74■□□□□ 0.59
SCARB2-223ENST00000640640 KLHDC7AQ5VTJ3 777 aa18.74■□□□□ 0.59
SCARB2-223ENST00000640640 CDKAL1Q5VV42 579 aa18.74■□□□□ 0.59
SCARB2-223ENST00000640640 IL17RAQ96F46 866 aa18.74■□□□□ 0.59
SCARB2-223ENST00000640640 TFR2Q9UP52 801 aa18.74■□□□□ 0.59
SCARB2-223ENST00000640640 SRGAP2BP0DMP2 458 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 PMS2P54278 862 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 ERVK-24P63145 666 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 TKFCQ3LXA3 575 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 NXNQ6DKJ4 435 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 CENPPQ6IPU0 288 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 BZW1Q7L1Q6 419 aaKnown RBP18.73■□□□□ 0.59
SCARB2-223ENST00000640640 SLC16A10Q8TF71 515 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 GMCL1Q96IK5 515 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 MOV10L1Q9BXT6 1211 aaKnown RBP18.73■□□□□ 0.59
SCARB2-223ENST00000640640 M0QYV0 167 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 HUS1O60921 280 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 PRKCBP05771 671 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 KRT7P08729 469 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 PRKCEQ02156 737 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 CAV1Q03135 178 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 RPS6KA2Q15349 733 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 TRIM42Q8IWZ5 723 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 BEST2Q8NFU1 509 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 A0A087WUV0 522 aaPredicted RBP18.73■□□□□ 0.59
SCARB2-223ENST00000640640 MYL3P08590 195 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 SDC4P31431 198 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 TPD52P55327 224 aaPredicted RBP18.73■□□□□ 0.59
SCARB2-223ENST00000640640 ARL4CP56559 192 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 MAGOHP61326 146 aaKnown RBP18.73■□□□□ 0.59
SCARB2-223ENST00000640640 WDR72Q3MJ13 1102 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 RAPH1Q70E73 1250 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 ANKRD7Q92527 254 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 TAAR1Q96RJ0 339 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 HEY1Q9Y5J3 304 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 SIGLEC1Q9BZZ2 1709 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 RPS12P25398 132 aaKnown RBP18.73■□□□□ 0.59
SCARB2-223ENST00000640640 SLC30A5Q8TAD4 765 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 KLHL29Q96CT2 875 aa18.73■□□□□ 0.59
SCARB2-223ENST00000640640 MAGED2Q9UNF1 606 aaPredicted RBP18.73■□□□□ 0.59
SCARB2-223ENST00000640640 SPDYE2BA6NHP3 402 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 RSPH10B2B2RC85 870 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 ICAM1P05362 532 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 RSPH10BP0C881 870 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 SPDYE6P0CI01 402 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 GNAT1P11488 350 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 DHX34Q14147 1143 aaKnown RBP18.72■□□□□ 0.59
SCARB2-223ENST00000640640 NOA1Q8NC60 698 aaKnown RBP18.72■□□□□ 0.59
SCARB2-223ENST00000640640 VCX3BQ9H321 246 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 PLEKP08567 350 aaPredicted RBP18.72■□□□□ 0.59
SCARB2-223ENST00000640640 CLNS1AP54105 237 aaKnown RBP18.72■□□□□ 0.59
SCARB2-223ENST00000640640 CCDC38Q502W7 563 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 PCGF5Q86SE9 256 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 C1orf54Q8WWF1 131 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 FAF2Q96CS3 445 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 FAM163AQ96GL9 167 aaPredicted RBP18.72■□□□□ 0.59
SCARB2-223ENST00000640640 RUSC1Q9BVN2 902 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 SMYD2Q9NRG4 433 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 MMEP08473 750 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 XRRA1Q6P2D8 792 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 GSDMBQ8TAX9 411 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 L2HGDHQ9H9P8 463 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 SSTR3P32745 418 aaPredicted RBP18.72■□□□□ 0.59
SCARB2-223ENST00000640640 SHMT1P34896 483 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 EZH2Q15910 746 aaKnown RBP18.72■□□□□ 0.59
SCARB2-223ENST00000640640 ARL13BQ3SXY8 428 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 BBS5Q8N3I7 341 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 ANKS1AQ92625 1134 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 SYN2Q92777 582 aaPredicted RBP18.72■□□□□ 0.59
SCARB2-223ENST00000640640 KLC2Q9H0B6 622 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 AGPAT3Q9NRZ7 376 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 ANKEF1Q9NU02 776 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 UVRAGQ9P2Y5 699 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 FBXL5Q9UKA1 691 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 TMX2Q9Y320 296 aa18.72■□□□□ 0.59
SCARB2-223ENST00000640640 WDR91A4D1P6 747 aa18.71■□□□□ 0.59
SCARB2-223ENST00000640640 PARVAQ9NVD7 372 aa18.71■□□□□ 0.59
SCARB2-223ENST00000640640 COL9A3Q14050 684 aaPredicted RBP18.71■□□□□ 0.59
SCARB2-223ENST00000640640 EMC2Q15006 297 aa18.71■□□□□ 0.59
SCARB2-223ENST00000640640 TTC39CQ8N584 583 aa18.71■□□□□ 0.59
SCARB2-223ENST00000640640 RNF139Q8WU17 664 aa18.71■□□□□ 0.59
SCARB2-223ENST00000640640 DNAJC7Q99615 494 aa18.71■□□□□ 0.59
SCARB2-223ENST00000640640 PODXL2Q9NZ53 605 aa18.71■□□□□ 0.59
SCARB2-223ENST00000640640 SUCLA2Q9P2R7 463 aaPredicted RBP18.71■□□□□ 0.59
SCARB2-223ENST00000640640 MXD4Q14582 209 aaPredicted RBP18.71■□□□□ 0.59
SCARB2-223ENST00000640640 R3HDM1Q15032 1099 aaKnown RBP18.71■□□□□ 0.59
SCARB2-223ENST00000640640 CFAP61Q8NHU2 1237 aa18.71■□□□□ 0.59
SCARB2-223ENST00000640640 SEMA6BQ9H3T3 888 aa18.71■□□□□ 0.59
SCARB2-223ENST00000640640 IPO11Q9UI26 975 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms