RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 FMNL3Q8IVF7 1028 aa16.37■□□□□ 0.21
TRIM3-215ENST00000639856 ZSWIM2Q8NEG5 633 aa16.37■□□□□ 0.21
TRIM3-215ENST00000639856 GTF3C2Q8WUA4 911 aaPredicted RBP16.37■□□□□ 0.21
TRIM3-215ENST00000639856 COPS5Q92905 334 aa16.37■□□□□ 0.21
TRIM3-215ENST00000639856 MPHOSPH6Q99547 160 aaKnown RBP16.37■□□□□ 0.21
TRIM3-215ENST00000639856 CBWD1Q9BRT8 395 aa16.37■□□□□ 0.21
TRIM3-215ENST00000639856 INTS2Q9H0H0 1204 aaKnown RBP16.37■□□□□ 0.21
TRIM3-215ENST00000639856 ACBD3Q9H3P7 528 aa16.37■□□□□ 0.21
TRIM3-215ENST00000639856 VIPAS39Q9H9C1 493 aa16.37■□□□□ 0.21
TRIM3-215ENST00000639856 ATP6V0A4Q9HBG4 840 aa16.37■□□□□ 0.21
TRIM3-215ENST00000639856 PDGFCQ9NRA1 345 aa16.37■□□□□ 0.21
TRIM3-215ENST00000639856 APEX2Q9UBZ4 518 aa16.37■□□□□ 0.21
TRIM3-215ENST00000639856 DDX3XO00571 662 aaKnown RBP eCLIP16.36■□□□□ 0.21
TRIM3-215ENST00000639856 ADORA2AP29274 412 aa16.36■□□□□ 0.21
TRIM3-215ENST00000639856 KIFAP3Q92845 792 aa16.36■□□□□ 0.21
TRIM3-215ENST00000639856 MS4A14Q96JA4 679 aa16.36■□□□□ 0.21
TRIM3-215ENST00000639856 INTUQ9ULD6 942 aa16.36■□□□□ 0.21
TRIM3-215ENST00000639856 H2AFZP0C0S5 128 aa16.36■□□□□ 0.21
TRIM3-215ENST00000639856 MYBL2P10244 700 aa16.36■□□□□ 0.21
TRIM3-215ENST00000639856 MATR3P43243 847 aaKnown RBP eCLIP16.36■□□□□ 0.21
TRIM3-215ENST00000639856 CCNA1P78396 465 aa16.36■□□□□ 0.21
TRIM3-215ENST00000639856 EMC2Q15006 297 aa16.36■□□□□ 0.21
TRIM3-215ENST00000639856 HSDL1Q3SXM5 330 aa16.36■□□□□ 0.21
TRIM3-215ENST00000639856 H2AFVQ71UI9 128 aa16.36■□□□□ 0.21
TRIM3-215ENST00000639856 TRIM50Q86XT4 487 aa16.36■□□□□ 0.21
TRIM3-215ENST00000639856 MORC4Q8TE76 937 aa16.36■□□□□ 0.21
TRIM3-215ENST00000639856 GPR88Q9GZN0 384 aa16.36■□□□□ 0.21
TRIM3-215ENST00000639856 POLR3FQ9H1D9 316 aaPredicted RBP16.36■□□□□ 0.21
TRIM3-215ENST00000639856 KMT5AQ9NQR1 393 aa16.36■□□□□ 0.21
TRIM3-215ENST00000639856 DMGDHQ9UI17 866 aaKnown RBP16.36■□□□□ 0.21
TRIM3-215ENST00000639856 A0A0A6YYK5 440 aaPredicted RBP16.35■□□□□ 0.21
TRIM3-215ENST00000639856 DENND3A2RUS2 1198 aa16.35■□□□□ 0.21
TRIM3-215ENST00000639856 ITGBL1O95965 494 aaPredicted RBP16.35■□□□□ 0.21
TRIM3-215ENST00000639856 ZBTB48P10074 688 aaPredicted RBP16.35■□□□□ 0.21
TRIM3-215ENST00000639856 RFX1P22670 979 aa16.35■□□□□ 0.21
TRIM3-215ENST00000639856 NOP2P46087 812 aaKnown RBP16.35■□□□□ 0.21
TRIM3-215ENST00000639856 STAT5BP51692 787 aa16.35■□□□□ 0.21
TRIM3-215ENST00000639856 POLGP54098 1239 aaPredicted RBP16.35■□□□□ 0.21
TRIM3-215ENST00000639856 SNRPFP62306 86 aaKnown RBP16.35■□□□□ 0.21
TRIM3-215ENST00000639856 CELF3Q5SZQ8 465 aaKnown RBP16.35■□□□□ 0.21
TRIM3-215ENST00000639856 ARMCX2Q7L311 632 aa16.35■□□□□ 0.21
TRIM3-215ENST00000639856 SLC17A8Q8NDX2 589 aa16.35■□□□□ 0.21
TRIM3-215ENST00000639856 MCPH1Q8NEM0 835 aa16.35■□□□□ 0.21
TRIM3-215ENST00000639856 SLC30A5Q8TAD4 765 aa16.35■□□□□ 0.21
TRIM3-215ENST00000639856 LMO3Q8TAP4 145 aa16.35■□□□□ 0.21
TRIM3-215ENST00000639856 HDAC7Q8WUI4 952 aa16.35■□□□□ 0.21
TRIM3-215ENST00000639856 TMEM143Q96AN5 459 aa16.35■□□□□ 0.21
TRIM3-215ENST00000639856 CEP89Q96ST8 783 aa16.35■□□□□ 0.21
TRIM3-215ENST00000639856 RBM12Q9NTZ6 932 aaKnown RBP16.35■□□□□ 0.21
TRIM3-215ENST00000639856 PRDM4Q9UKN5 801 aa16.35■□□□□ 0.21
TRIM3-215ENST00000639856 TBX20Q9UMR3 447 aa16.35■□□□□ 0.21
TRIM3-215ENST00000639856 PACSIN2Q9UNF0 486 aaPredicted RBP16.35■□□□□ 0.21
TRIM3-215ENST00000639856 CES2O00748 559 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 CCDC172P0C7W6 258 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 VAMP7P51809 220 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 SMTNP53814 917 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 HUNKP57058 714 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 DLG4P78352 724 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 GLE1Q53GS7 698 aaKnown RBP16.34■□□□□ 0.21
TRIM3-215ENST00000639856 CCDC62Q6P9F0 684 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 DNAAF5Q86Y56 855 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 LRRC57Q8N9N7 239 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 XXYLT1Q8NBI6 393 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 OLIG1Q8TAK6 271 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 LNX1Q8TBB1 728 aaPredicted RBP16.34■□□□□ 0.21
TRIM3-215ENST00000639856 SEPT1Q8WYJ6 367 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 GPR20Q99678 358 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 MORF4L1Q9UBU8 362 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 ANKRD63C9JTQ0 380 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 MAPK13O15264 365 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 P4HA2O15460 535 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 N4BP1O75113 896 aaKnown RBP16.34■□□□□ 0.21
TRIM3-215ENST00000639856 MARK3P27448 753 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 TNNT3P45378 269 aaPredicted RBP16.34■□□□□ 0.21
TRIM3-215ENST00000639856 GCLCP48506 637 aaPredicted RBP16.34■□□□□ 0.21
TRIM3-215ENST00000639856 DNA2P51530 1060 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 ZNF792Q3KQV3 632 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 PHLDB3Q6NSJ2 640 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 C8orf74Q6P047 294 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 TPCN2Q8NHX9 752 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 U2AF1L4Q8WU68 220 aaKnown RBP16.34■□□□□ 0.21
TRIM3-215ENST00000639856 SPIRE2Q8WWL2 714 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 SYT11Q9BT88 431 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 HSPBP1Q9NZL4 362 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 TRPM7Q96QT4 1865 aa16.34■□□□□ 0.21
TRIM3-215ENST00000639856 EMSYQ7Z589 1322 aa16.33■□□□□ 0.21
TRIM3-215ENST00000639856 ECM2O94769 699 aaPredicted RBP16.33■□□□□ 0.21
TRIM3-215ENST00000639856 TXNP10599 105 aaKnown RBP16.33■□□□□ 0.21
TRIM3-215ENST00000639856 ADSSP30520 456 aa16.33■□□□□ 0.21
TRIM3-215ENST00000639856 RPS6KA1Q15418 735 aa16.33■□□□□ 0.21
TRIM3-215ENST00000639856 GJC2Q5T442 439 aaPredicted RBP16.33■□□□□ 0.21
TRIM3-215ENST00000639856 MAP4K3Q8IVH8 894 aa16.33■□□□□ 0.21
TRIM3-215ENST00000639856 GSPT2Q8IYD1 628 aaKnown RBP16.33■□□□□ 0.21
TRIM3-215ENST00000639856 AFAP1L1Q8TED9 768 aa16.33■□□□□ 0.21
TRIM3-215ENST00000639856 PARK7Q99497 189 aaKnown RBP16.33■□□□□ 0.21
TRIM3-215ENST00000639856 NTPCRQ9BSD7 190 aaKnown RBP16.33■□□□□ 0.21
TRIM3-215ENST00000639856 SELENOOQ9BVL4 669 aa16.33■□□□□ 0.21
TRIM3-215ENST00000639856 NIFKQ9BYG3 293 aaKnown RBP16.33■□□□□ 0.21
TRIM3-215ENST00000639856 DHX33Q9H6R0 707 aaKnown RBP16.33■□□□□ 0.21
TRIM3-215ENST00000639856 C17orf75Q9HAS0 396 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms