RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 RIN2Q8WYP3 895 aaPredicted RBP8.31□□□□□ -1.08
NECAP1-220ENST00000639841 PHF20Q9BVI0 1012 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 MRPL9Q9BYD2 267 aaKnown RBP8.31□□□□□ -1.08
NECAP1-220ENST00000639841 C22orf23Q9BZE7 217 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 POLMQ9NP87 494 aaPredicted RBP8.31□□□□□ -1.08
NECAP1-220ENST00000639841 OLA1Q9NTK5 396 aaKnown RBP8.31□□□□□ -1.08
NECAP1-220ENST00000639841 SRPK3Q9UPE1 567 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 NOC2LQ9Y3T9 749 aaKnown RBP8.31□□□□□ -1.08
NECAP1-220ENST00000639841 GPR45Q9Y5Y3 372 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 CARMIL3Q8ND23 1372 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 A0A087X0M5 115 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 A0A1B0GX30 115 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 A0A1W2PPH5 198 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 ZNF862O60290 1169 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 DKC1O60832 514 aaKnown RBP eCLIP8.31□□□□□ -1.08
NECAP1-220ENST00000639841 TADA3O75528 432 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 NAT1P18440 290 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 MUTP22033 750 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 HSPA7P48741 367 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 SNX17Q15036 470 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 MPEG1Q2M385 716 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 INTS5Q6P9B9 1019 aaKnown RBP8.31□□□□□ -1.08
NECAP1-220ENST00000639841 TTLL7Q6ZT98 887 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 C2CD5Q86YS7 1000 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 CRACR2BQ8N4Y2 399 aaPredicted RBP8.31□□□□□ -1.08
NECAP1-220ENST00000639841 ATG16L2Q8NAA4 619 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 COA7Q96BR5 231 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 CGRRF1Q99675 332 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 BRIP1Q9BX63 1249 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 UNKQ9C0B0 810 aaKnown RBP8.31□□□□□ -1.08
NECAP1-220ENST00000639841 ZDHHC5Q9C0B5 715 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 NOL6Q9H6R4 1146 aaKnown RBP8.31□□□□□ -1.08
NECAP1-220ENST00000639841 CSADQ9Y600 493 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 FER1L6Q2WGJ9 1857 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 POM121BA6NF01 834 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 TRIM64CA6NLI5 447 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 ARNTLO00327 626 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 MSCO60682 206 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 USO1O60763 962 aaKnown RBP8.3□□□□□ -1.08
NECAP1-220ENST00000639841 SERPINB2P05120 415 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 TIMP2P16035 220 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 CTCFP49711 727 aaPredicted RBP8.3□□□□□ -1.08
NECAP1-220ENST00000639841 YARSP54577 528 aaKnown RBP8.3□□□□□ -1.08
NECAP1-220ENST00000639841 DRG2P55039 364 aaKnown RBP8.3□□□□□ -1.08
NECAP1-220ENST00000639841 MBTPS1Q14703 1052 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 ZC3H12AQ5D1E8 599 aaKnown RBP8.3□□□□□ -1.08
NECAP1-220ENST00000639841 MAEAQ7L5Y9 396 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 UBE2Q1Q7Z7E8 422 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 RPAINQ86UA6 219 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 CPOQ8IVL8 374 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 MEIOBQ8N635 442 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 ARL6IP6Q8N6S5 226 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 C7orf31Q8N865 590 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 NANOS1Q8WY41 292 aaKnown RBP8.3□□□□□ -1.08
NECAP1-220ENST00000639841 WDR89Q96FK6 387 aaPredicted RBP8.3□□□□□ -1.08
NECAP1-220ENST00000639841 USP26Q9BXU7 913 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 STAP2Q9UGK3 403 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 HOXC11O43248 304 aaPredicted RBP8.3□□□□□ -1.08
NECAP1-220ENST00000639841 SPINT1O43278 529 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 DOK2O60496 412 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 SKAP2O75563 359 aaPredicted RBP8.3□□□□□ -1.08
NECAP1-220ENST00000639841 CYP19A1P11511 503 aaPredicted RBP8.3□□□□□ -1.08
NECAP1-220ENST00000639841 ITGA8P53708 1063 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 WDR4P57081 412 aaKnown RBP8.3□□□□□ -1.08
NECAP1-220ENST00000639841 GPR85P60893 370 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 GPLD1P80108 840 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 RING1Q06587 406 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 NFIXQ14938 502 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 PFKFB4Q16877 469 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 RASGRP2Q7LDG7 609 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 LDHDQ86WU2 507 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 GALNT13Q8IUC8 556 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 TTC5Q8N0Z6 440 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 BRI3BPQ8WY22 251 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 RRP36Q96EU6 259 aaKnown RBP8.3□□□□□ -1.08
NECAP1-220ENST00000639841 SPAG5Q96R06 1193 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 KATNAL1Q9BW62 490 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 WNT10AQ9GZT5 417 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 SLC13A4Q9UKG4 626 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 SNX13Q9Y5W8 968 aa8.3□□□□□ -1.08
NECAP1-220ENST00000639841 VIRMAQ69YN4 1812 aaKnown RBP8.29□□□□□ -1.08
NECAP1-220ENST00000639841 CNTNAP1P78357 1384 aa8.29□□□□□ -1.08
NECAP1-220ENST00000639841 PGPEP1LA6NFU8 196 aa8.29□□□□□ -1.08
NECAP1-220ENST00000639841 F5H0A9 414 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-220ENST00000639841 ACKR2O00590 384 aa8.29□□□□□ -1.08
NECAP1-220ENST00000639841 ALDH1A1P00352 501 aa8.29□□□□□ -1.08
NECAP1-220ENST00000639841 APPP05067 770 aa8.29□□□□□ -1.08
NECAP1-220ENST00000639841 FAM157BP0CG42 384 aa8.29□□□□□ -1.08
NECAP1-220ENST00000639841 RHOQP17081 205 aa8.29□□□□□ -1.08
NECAP1-220ENST00000639841 CHRNA5P30532 468 aa8.29□□□□□ -1.08
NECAP1-220ENST00000639841 ALDH9A1P49189 494 aa8.29□□□□□ -1.08
NECAP1-220ENST00000639841 ST5P78524 1137 aa8.29□□□□□ -1.08
NECAP1-220ENST00000639841 PSMD6Q15008 389 aa8.29□□□□□ -1.08
NECAP1-220ENST00000639841 ZACNQ401N2 412 aa8.29□□□□□ -1.08
NECAP1-220ENST00000639841 OTOP1Q7RTM1 612 aa8.29□□□□□ -1.08
NECAP1-220ENST00000639841 BRSK2Q8IWQ3 736 aa8.29□□□□□ -1.08
NECAP1-220ENST00000639841 RNF217Q8TC41 542 aa8.29□□□□□ -1.08
NECAP1-220ENST00000639841 BHMTQ93088 406 aa8.29□□□□□ -1.08
NECAP1-220ENST00000639841 C18orf8Q96DM3 657 aa8.29□□□□□ -1.08
NECAP1-220ENST00000639841 APIPQ96GX9 242 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms