RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 FAM213AQ9BRX8 229 aa6.34□□□□□ -1.39
HNRNPU-220ENST00000639667 FGFBP2Q9BYJ0 223 aa6.34□□□□□ -1.39
HNRNPU-220ENST00000639667 RPF1Q9H9Y2 349 aaKnown RBP6.34□□□□□ -1.39
HNRNPU-220ENST00000639667 FRMD4BQ9Y2L6 1034 aa6.34□□□□□ -1.39
HNRNPU-220ENST00000639667 PHLPP2Q6ZVD8 1323 aa6.34□□□□□ -1.39
HNRNPU-220ENST00000639667 ADGRA3Q8IWK6 1321 aa6.34□□□□□ -1.39
HNRNPU-220ENST00000639667 CETN3O15182 167 aa6.34□□□□□ -1.39
HNRNPU-220ENST00000639667 STAG3L1P0CL83 205 aa6.34□□□□□ -1.39
HNRNPU-220ENST00000639667 RPL13P26373 211 aaKnown RBP6.34□□□□□ -1.39
HNRNPU-220ENST00000639667 PRCPP42785 496 aa6.34□□□□□ -1.39
HNRNPU-220ENST00000639667 NLRP12P59046 1061 aa6.34□□□□□ -1.39
HNRNPU-220ENST00000639667 SPAG1Q07617 926 aa6.34□□□□□ -1.39
HNRNPU-220ENST00000639667 SLFN12LQ6IEE8 588 aa6.34□□□□□ -1.39
HNRNPU-220ENST00000639667 PGBD4Q96DM1 585 aa6.34□□□□□ -1.39
HNRNPU-220ENST00000639667 CEP89Q96ST8 783 aa6.34□□□□□ -1.39
HNRNPU-220ENST00000639667 IFT122Q9HBG6 1241 aa6.34□□□□□ -1.39
HNRNPU-220ENST00000639667 SNTG2Q9NY99 539 aa6.34□□□□□ -1.39
HNRNPU-220ENST00000639667 AGO2Q9UKV8 859 aaKnown RBP6.34□□□□□ -1.39
HNRNPU-220ENST00000639667 MTUS1Q9ULD2 1270 aa6.34□□□□□ -1.39
HNRNPU-220ENST00000639667 TBKBP1A7MCY6 615 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 ANKRD63C9JTQ0 380 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 TSPAN1O60635 241 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 TPM2P07951 284 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 DLATP10515 647 aaKnown RBP6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 MAPTP10636 758 aaKnown RBP6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 ABCD1P33897 745 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 TYRO3Q06418 890 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 PAK1Q13153 545 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 ADAM9Q13443 819 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 KNOP1Q1ED39 458 aaKnown RBP6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 TRIM71Q2Q1W2 868 aaKnown RBP6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 C1orf53Q5VUE5 145 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 PCMTD1Q96MG8 357 aaPredicted RBP6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.33□□□□□ -1.43e-8■■■■□ 19.5
HNRNPU-220ENST00000639667 FTHL17Q9BXU8 183 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 EIF2AQ9BY44 585 aaKnown RBP6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 GTPBP4Q9BZE4 634 aaKnown RBP6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.33□□□□□ -1.45e-8■■■■■ 88.3
HNRNPU-220ENST00000639667 BICDL2A1A5D9 508 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 TRIM49BA6NDI0 452 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 KLRC4O43908 158 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 RHOBTB3O94955 611 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 KRT19P08727 400 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 TNNI1P19237 187 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 NR2F2P24468 414 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 RFC2P35250 354 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 MTIF2P46199 727 aaKnown RBP6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 BIRC3Q13489 604 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 KCNB1Q14721 858 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 NOLC1Q14978 699 aaKnown RBP eCLIP6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 ANO6Q4KMQ2 910 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 GLRA4Q5JXX5 417 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 NT5DC1Q5TFE4 455 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 SLC27A1Q6PCB7 646 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 GLB1LQ6UWU2 654 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 MPZL3Q6UWV2 235 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 CSGALNACT2Q8N6G5 542 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 ANKRD20A12PQ8NF67 263 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 URGCPQ8TCY9 931 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 APBB2Q92870 758 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 ACAP3Q96P50 834 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 CTAGE1Q96RT6 745 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 TMEM134Q9H6X4 195 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 PCDHB2Q9Y5E7 798 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 TOM1L1O75674 476 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 EPB41P11171 864 aaKnown RBP6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 AXLP30530 894 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 NCKAP1LP55160 1127 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 TFAMQ00059 246 aaKnown RBP6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 MBTPS1Q14703 1052 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 ZSCAN23Q3MJ62 389 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 DCAF17Q5H9S7 520 aaPredicted RBP6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.33□□□□□ -1.43e-10■□□□□ 9.9
HNRNPU-220ENST00000639667 MLKLQ8NB16 471 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 GOLGA5Q8TBA6 731 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 PRIMPOLQ96LW4 560 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 ACO2Q99798 780 aaKnown RBP6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 SRRTQ9BXP5 876 aaKnown RBP6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 TSPY26PQ9H489 355 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 OLFML3Q9NRN5 406 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 FAM105AQ9NUU6 356 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 ARHGAP28Q9P2N2 729 aa6.33□□□□□ -1.4
HNRNPU-220ENST00000639667 TTLL13PA6NNM8 815 aa6.32□□□□□ -1.4
HNRNPU-220ENST00000639667 ENPP3O14638 875 aa6.32□□□□□ -1.4
HNRNPU-220ENST00000639667 TLL1O43897 1013 aa6.32□□□□□ -1.4
HNRNPU-220ENST00000639667 FGFR1OPO95684 399 aaKnown RBP6.32□□□□□ -1.4
HNRNPU-220ENST00000639667 POMCP01189 267 aa6.32□□□□□ -1.4
HNRNPU-220ENST00000639667 ATP2A2P16615 1042 aaKnown RBP6.32□□□□□ -1.4
HNRNPU-220ENST00000639667 ZNF131P52739 623 aa6.32□□□□□ -1.4
HNRNPU-220ENST00000639667 BTG3Q14201 252 aaPredicted RBP6.32□□□□□ -1.4
HNRNPU-220ENST00000639667 DPCR1Q3MIW9 517 aa6.32□□□□□ -1.4
HNRNPU-220ENST00000639667 LMBRD2Q68DH5 695 aaPredicted RBP6.32□□□□□ -1.4
HNRNPU-220ENST00000639667 SLC24A5Q71RS6 500 aa6.32□□□□□ -1.4
HNRNPU-220ENST00000639667 LINC01465Q8N7H1 131 aa6.32□□□□□ -1.4
HNRNPU-220ENST00000639667 CEP120Q8N960 986 aa6.32□□□□□ -1.4
HNRNPU-220ENST00000639667 KIAA0895Q8NCT3 520 aa6.32□□□□□ -1.4
HNRNPU-220ENST00000639667 HELQQ8TDG4 1101 aa6.32□□□□□ -1.4
HNRNPU-220ENST00000639667 SCFD1Q8WVM8 642 aa6.32□□□□□ -1.4
HNRNPU-220ENST00000639667 P2RX5Q93086 422 aa6.32□□□□□ -1.4
HNRNPU-220ENST00000639667 CBWD1Q9BRT8 395 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms