RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 B3GNT9Q6UX72 402 aa16.76■□□□□ 0.27
SYNE2-228ENST00000639659 MRPL10Q7Z7H8 261 aaKnown RBP16.76■□□□□ 0.27
SYNE2-228ENST00000639659 CPB2Q96IY4 423 aa16.76■□□□□ 0.27
SYNE2-228ENST00000639659 MYADMQ96S97 322 aa16.76■□□□□ 0.27
SYNE2-228ENST00000639659 EIF2AQ9BY44 585 aaKnown RBP16.76■□□□□ 0.27
SYNE2-228ENST00000639659 TBC1D17Q9HA65 648 aa16.76■□□□□ 0.27
SYNE2-228ENST00000639659 KCNJ14Q9UNX9 436 aa16.76■□□□□ 0.27
SYNE2-228ENST00000639659 SSX2IPQ9Y2D8 614 aa16.76■□□□□ 0.27
SYNE2-228ENST00000639659 HES2Q9Y543 173 aa16.76■□□□□ 0.27
SYNE2-228ENST00000639659 IPPQ9Y573 584 aa16.76■□□□□ 0.27
SYNE2-228ENST00000639659 TDRD15B5MCY1 1934 aaKnown RBP16.75■□□□□ 0.27
SYNE2-228ENST00000639659 CCDC194A0A1B0GVG4 234 aa16.75■□□□□ 0.27
SYNE2-228ENST00000639659 KRBA1A5PL33 1030 aa16.75■□□□□ 0.27
SYNE2-228ENST00000639659 LILRB3O75022 631 aa16.75■□□□□ 0.27
SYNE2-228ENST00000639659 DEXIO95424 95 aa16.75■□□□□ 0.27
SYNE2-228ENST00000639659 NCLP19338 710 aaKnown RBP16.75■□□□□ 0.27
SYNE2-228ENST00000639659 HOXA11P31270 313 aaPredicted RBP16.75■□□□□ 0.27
SYNE2-228ENST00000639659 RFC5P40937 340 aa16.75■□□□□ 0.27
SYNE2-228ENST00000639659 XKR9Q5GH70 373 aa16.75■□□□□ 0.27
SYNE2-228ENST00000639659 KRT25Q7Z3Z0 450 aa16.75■□□□□ 0.27
SYNE2-228ENST00000639659 SMG8Q8ND04 991 aaKnown RBP16.75■□□□□ 0.27
SYNE2-228ENST00000639659 ZFP42Q96MM3 310 aa16.75■□□□□ 0.27
SYNE2-228ENST00000639659 LXNQ9BS40 222 aa16.75■□□□□ 0.27
SYNE2-228ENST00000639659 TRIM6Q9C030 488 aaPredicted RBP16.75■□□□□ 0.27
SYNE2-228ENST00000639659 RNF39Q9H2S5 420 aa16.75■□□□□ 0.27
SYNE2-228ENST00000639659 WDR6Q9NNW5 1121 aaKnown RBP16.75■□□□□ 0.27
SYNE2-228ENST00000639659 WRAP73Q9P2S5 460 aaPredicted RBP16.75■□□□□ 0.27
SYNE2-228ENST00000639659 DPP7Q9UHL4 492 aa16.75■□□□□ 0.27
SYNE2-228ENST00000639659 ARL5CA6NH57 179 aa16.74■□□□□ 0.27
SYNE2-228ENST00000639659 INO80B-WBP1J3KQ70 363 aa16.74■□□□□ 0.27
SYNE2-228ENST00000639659 NR1I2O75469 434 aa16.74■□□□□ 0.27
SYNE2-228ENST00000639659 DCNP07585 359 aaKnown RBP16.74■□□□□ 0.27
SYNE2-228ENST00000639659 CYP4A11Q02928 519 aa16.74■□□□□ 0.27
SYNE2-228ENST00000639659 MOXD1Q6UVY6 613 aa16.74■□□□□ 0.27
SYNE2-228ENST00000639659 ERMP1Q7Z2K6 904 aa16.74■□□□□ 0.27
SYNE2-228ENST00000639659 COLGALT2Q8IYK4 626 aa16.74■□□□□ 0.27
SYNE2-228ENST00000639659 CMASQ8NFW8 434 aaPredicted RBP16.74■□□□□ 0.27
SYNE2-228ENST00000639659 GPR152Q8TDT2 470 aa16.74■□□□□ 0.27
SYNE2-228ENST00000639659 TCP11Q8WWU5 503 aa16.74■□□□□ 0.27
SYNE2-228ENST00000639659 RABGGTAQ92696 567 aa16.74■□□□□ 0.27
SYNE2-228ENST00000639659 KCNB2Q92953 911 aa16.74■□□□□ 0.27
SYNE2-228ENST00000639659 MTRQ99707 1265 aa16.74■□□□□ 0.27
SYNE2-228ENST00000639659 AGXT2Q9BYV1 514 aa16.74■□□□□ 0.27
SYNE2-228ENST00000639659 RGL1Q9NZL6 768 aa16.74■□□□□ 0.27
SYNE2-228ENST00000639659 WNT16Q9UBV4 365 aa16.74■□□□□ 0.27
SYNE2-228ENST00000639659 VAV3Q9UKW4 847 aa16.74■□□□□ 0.27
SYNE2-228ENST00000639659 ARID2Q68CP9 1835 aa16.74■□□□□ 0.27
SYNE2-228ENST00000639659 CCNT1O60563 726 aaKnown RBP16.73■□□□□ 0.27
SYNE2-228ENST00000639659 TSPAN1O60635 241 aa16.73■□□□□ 0.27
SYNE2-228ENST00000639659 LMNAP02545 664 aaKnown RBP16.73■□□□□ 0.27
SYNE2-228ENST00000639659 P4HBP07237 508 aaKnown RBP16.73■□□□□ 0.27
SYNE2-228ENST00000639659 RPL17P18621 184 aaKnown RBP16.73■□□□□ 0.27
SYNE2-228ENST00000639659 YWHABP31946 246 aaKnown RBP16.73■□□□□ 0.27
SYNE2-228ENST00000639659 NCBP1Q09161 790 aaKnown RBP16.73■□□□□ 0.27
SYNE2-228ENST00000639659 PPP2R5CQ13362 524 aa16.73■□□□□ 0.27
SYNE2-228ENST00000639659 CTTNQ14247 550 aaKnown RBP16.73■□□□□ 0.27
SYNE2-228ENST00000639659 NOTUMQ6P988 496 aa16.73■□□□□ 0.27
SYNE2-228ENST00000639659 CPLX2Q6PUV4 134 aaKnown RBP16.73■□□□□ 0.27
SYNE2-228ENST00000639659 CENPQQ7L2Z9 268 aaPredicted RBP16.73■□□□□ 0.27
SYNE2-228ENST00000639659 FERMT3Q86UX7 667 aa16.73■□□□□ 0.27
SYNE2-228ENST00000639659 EXOC8Q8IYI6 725 aa16.73■□□□□ 0.27
SYNE2-228ENST00000639659 KIAA2013Q8IYS2 634 aa16.73■□□□□ 0.27
SYNE2-228ENST00000639659 SLC44A3Q8N4M1 653 aa16.73■□□□□ 0.27
SYNE2-228ENST00000639659 CNNM3Q8NE01 707 aa16.73■□□□□ 0.27
SYNE2-228ENST00000639659 DYDC2Q96IM9 177 aa16.73■□□□□ 0.27
SYNE2-228ENST00000639659 MBOAT7Q96N66 472 aa16.73■□□□□ 0.27
SYNE2-228ENST00000639659 DHX33Q9H6R0 707 aaKnown RBP16.73■□□□□ 0.27
SYNE2-228ENST00000639659 UBN1Q9NPG3 1134 aa16.73■□□□□ 0.27
SYNE2-228ENST00000639659 M0R2N6 131 aa16.72■□□□□ 0.27
SYNE2-228ENST00000639659 ZBTB39O15060 712 aa16.72■□□□□ 0.27
SYNE2-228ENST00000639659 GAS2O43903 313 aaKnown RBP16.72■□□□□ 0.27
SYNE2-228ENST00000639659 DTNBO60941 627 aa16.72■□□□□ 0.27
SYNE2-228ENST00000639659 SRFP11831 508 aa16.72■□□□□ 0.27
SYNE2-228ENST00000639659 TOB2Q14106 344 aaPredicted RBP16.72■□□□□ 0.27
SYNE2-228ENST00000639659 KIAA0319Q5VV43 1072 aa16.72■□□□□ 0.27
SYNE2-228ENST00000639659 OTUD6AQ7L8S5 288 aa16.72■□□□□ 0.27
SYNE2-228ENST00000639659 NEK8Q86SG6 692 aa16.72■□□□□ 0.27
SYNE2-228ENST00000639659 CDR2LQ86X02 465 aaPredicted RBP16.72■□□□□ 0.27
SYNE2-228ENST00000639659 DAGLBQ8NCG7 672 aa16.72■□□□□ 0.27
SYNE2-228ENST00000639659 ZNF707Q96C28 371 aaPredicted RBP16.72■□□□□ 0.27
SYNE2-228ENST00000639659 CCDC43Q96MW1 224 aaKnown RBP16.72■□□□□ 0.27
SYNE2-228ENST00000639659 COLEC11Q9BWP8 271 aa16.72■□□□□ 0.27
SYNE2-228ENST00000639659 NXF3Q9H4D5 531 aaKnown RBP16.72■□□□□ 0.27
SYNE2-228ENST00000639659 ARHGEF3Q9NR81 526 aa16.72■□□□□ 0.27
SYNE2-228ENST00000639659 MIOSQ9NXC5 875 aa16.72■□□□□ 0.27
SYNE2-228ENST00000639659 KLK14Q9P0G3 267 aa16.72■□□□□ 0.27
SYNE2-228ENST00000639659 EPS15L1Q9UBC2 864 aa16.72■□□□□ 0.27
SYNE2-228ENST00000639659 DMDP11532 3685 aa16.72■□□□□ 0.27
SYNE2-228ENST00000639659 GVINP1Q7Z2Y8 2422 aa16.71■□□□□ 0.27
SYNE2-228ENST00000639659 TGM5O43548 720 aa16.71■□□□□ 0.27
SYNE2-228ENST00000639659 NPTXRO95502 500 aa16.71■□□□□ 0.27
SYNE2-228ENST00000639659 AKAP5P24588 427 aa16.71■□□□□ 0.27
SYNE2-228ENST00000639659 DSG1Q02413 1049 aa16.71■□□□□ 0.27
SYNE2-228ENST00000639659 TFDP1Q14186 410 aa16.71■□□□□ 0.27
SYNE2-228ENST00000639659 NPY5RQ15761 445 aa16.71■□□□□ 0.27
SYNE2-228ENST00000639659 FUT10Q6P4F1 479 aa16.71■□□□□ 0.27
SYNE2-228ENST00000639659 PIK3AP1Q6ZUJ8 805 aa16.71■□□□□ 0.27
SYNE2-228ENST00000639659 RUFY3Q7L099 469 aa16.71■□□□□ 0.27
SYNE2-228ENST00000639659 POTEDQ86YR6 584 aa16.71■□□□□ 0.27
SYNE2-228ENST00000639659 TPH2Q8IWU9 490 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms