RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 NECAB1Q8N987 351 aa16.32■□□□□ 0.2
TARDBP-231ENST00000639599 GTF3C6Q969F1 213 aa16.32■□□□□ 0.2
TARDBP-231ENST00000639599 CPB2Q96IY4 423 aa16.32■□□□□ 0.2
TARDBP-231ENST00000639599 KLHL5Q96PQ7 755 aa16.32■□□□□ 0.2
TARDBP-231ENST00000639599 CSRNP2Q9H175 543 aa16.32■□□□□ 0.2
TARDBP-231ENST00000639599 LIMD1Q9UGP4 676 aa16.32■□□□□ 0.2
TARDBP-231ENST00000639599 FAM205CA6NFA0 338 aa16.31■□□□□ 0.2
TARDBP-231ENST00000639599 LRRIQ4A6NIV6 560 aa16.31■□□□□ 0.2
TARDBP-231ENST00000639599 USO1O60763 962 aaKnown RBP16.31■□□□□ 0.2
TARDBP-231ENST00000639599 DTNBO60941 627 aa16.31■□□□□ 0.2
TARDBP-231ENST00000639599 SLITRK3O94933 977 aa16.31■□□□□ 0.2
TARDBP-231ENST00000639599 ASGR2P07307 311 aa16.31■□□□□ 0.2
TARDBP-231ENST00000639599 ATP2B1P20020 1258 aa16.31■□□□□ 0.2
TARDBP-231ENST00000639599 RFX1P22670 979 aa16.31■□□□□ 0.2
TARDBP-231ENST00000639599 HOXA11P31270 313 aaPredicted RBP16.31■□□□□ 0.2
TARDBP-231ENST00000639599 GLUD2P49448 558 aa16.31■□□□□ 0.2
TARDBP-231ENST00000639599 NUBP1P53384 320 aa16.31■□□□□ 0.2
TARDBP-231ENST00000639599 VCPP55072 806 aaKnown RBP16.31■□□□□ 0.2
TARDBP-231ENST00000639599 PTENP60484 403 aa16.31■□□□□ 0.2
TARDBP-231ENST00000639599 EARS2Q5JPH6 523 aaKnown RBP16.31■□□□□ 0.2
TARDBP-231ENST00000639599 UBXN11Q5T124 520 aa16.31■□□□□ 0.2
TARDBP-231ENST00000639599 ZBTB8OSQ8IWT0 167 aa16.31■□□□□ 0.2
TARDBP-231ENST00000639599 DIS3L2Q8IYB7 885 aaKnown RBP16.31■□□□□ 0.2
TARDBP-231ENST00000639599 SLC22A17Q8WUG5 538 aa16.31■□□□□ 0.2
TARDBP-231ENST00000639599 STAMQ92783 540 aa16.31■□□□□ 0.2
TARDBP-231ENST00000639599 GAD1Q99259 594 aa16.31■□□□□ 0.2
TARDBP-231ENST00000639599 HERC2P3Q9BVR0 1158 aa16.31■□□□□ 0.2
TARDBP-231ENST00000639599 COLEC11Q9BWP8 271 aa16.31■□□□□ 0.2
TARDBP-231ENST00000639599 EIF2AQ9BY44 585 aaKnown RBP16.31■□□□□ 0.2
TARDBP-231ENST00000639599 POLR3FQ9H1D9 316 aaPredicted RBP16.31■□□□□ 0.2
TARDBP-231ENST00000639599 PARP2Q9UGN5 583 aa16.31■□□□□ 0.2
TARDBP-231ENST00000639599 ARL5CA6NH57 179 aa16.3■□□□□ 0.2
TARDBP-231ENST00000639599 ZBTB39O15060 712 aa16.3■□□□□ 0.2
TARDBP-231ENST00000639599 CTDNEP1O95476 244 aa16.3■□□□□ 0.2
TARDBP-231ENST00000639599 BRD1O95696 1058 aa16.3■□□□□ 0.2
TARDBP-231ENST00000639599 GLUD1P00367 558 aa16.3■□□□□ 0.2
TARDBP-231ENST00000639599 CNPP09543 421 aaKnown RBP16.3■□□□□ 0.2
TARDBP-231ENST00000639599 SCNN1GP51170 649 aa16.3■□□□□ 0.2
TARDBP-231ENST00000639599 CLCN4P51793 760 aa16.3■□□□□ 0.2
TARDBP-231ENST00000639599 SPIRE1Q08AE8 756 aa16.3■□□□□ 0.2
TARDBP-231ENST00000639599 GPR149Q86SP6 731 aa16.3■□□□□ 0.2
TARDBP-231ENST00000639599 ERMNQ8TAM6 284 aa16.3■□□□□ 0.2
TARDBP-231ENST00000639599 PIDD1Q9HB75 910 aa16.3■□□□□ 0.2
TARDBP-231ENST00000639599 MAN1C1Q9NR34 630 aa16.3■□□□□ 0.2
TARDBP-231ENST00000639599 FBXL21Q9UKT6 434 aa16.3■□□□□ 0.2
TARDBP-231ENST00000639599 GIT1Q9Y2X7 761 aa16.3■□□□□ 0.2
TARDBP-231ENST00000639599 BTBD18B2RXH4 712 aa16.29■□□□□ 0.2
TARDBP-231ENST00000639599 LYPLA2O95372 231 aa16.29■□□□□ 0.2
TARDBP-231ENST00000639599 NPTXRO95502 500 aa16.29■□□□□ 0.2
TARDBP-231ENST00000639599 GBP2P32456 591 aaPredicted RBP16.29■□□□□ 0.2
TARDBP-231ENST00000639599 NEK4P51957 841 aa16.29■□□□□ 0.2
TARDBP-231ENST00000639599 POU5F1BQ06416 359 aa16.29■□□□□ 0.2
TARDBP-231ENST00000639599 CAPSQ13938 189 aa16.29■□□□□ 0.2
TARDBP-231ENST00000639599 ME3Q16798 604 aa16.29■□□□□ 0.2
TARDBP-231ENST00000639599 KANK3Q6NY19 840 aa16.29■□□□□ 0.2
TARDBP-231ENST00000639599 SLC27A1Q6PCB7 646 aa16.29■□□□□ 0.2
TARDBP-231ENST00000639599 C15orf39Q6ZRI6 1047 aa16.29■□□□□ 0.2
TARDBP-231ENST00000639599 MAEAQ7L5Y9 396 aa16.29■□□□□ 0.2
TARDBP-231ENST00000639599 SMG8Q8ND04 991 aaKnown RBP16.29■□□□□ 0.2
TARDBP-231ENST00000639599 MCPH1Q8NEM0 835 aa16.29■□□□□ 0.2
TARDBP-231ENST00000639599 ASAP3Q8TDY4 903 aa16.29■□□□□ 0.2
TARDBP-231ENST00000639599 PIGOQ8TEQ8 1089 aa16.29■□□□□ 0.2
TARDBP-231ENST00000639599 XPNPEP1Q9NQW7 623 aa16.29■□□□□ 0.2
TARDBP-231ENST00000639599 HES2Q9Y543 173 aa16.29■□□□□ 0.2
TARDBP-231ENST00000639599 MUC6Q6W4X9 2439 aa16.29■□□□□ 0.2
TARDBP-231ENST00000639599 B4GALT3O60512 393 aa16.28■□□□□ 0.2
TARDBP-231ENST00000639599 MCM7P33993 719 aa16.28■□□□□ 0.2
TARDBP-231ENST00000639599 RARRES1P49788 294 aa16.28■□□□□ 0.2
TARDBP-231ENST00000639599 AFF1P51825 1210 aaKnown RBP16.28■□□□□ 0.2
TARDBP-231ENST00000639599 CREMQ03060 361 aa16.28■□□□□ 0.2
TARDBP-231ENST00000639599 MBTD1Q05BQ5 628 aa16.28■□□□□ 0.2
TARDBP-231ENST00000639599 TCF15Q12870 199 aa16.28■□□□□ 0.2
TARDBP-231ENST00000639599 GRIK3Q13003 919 aa16.28■□□□□ 0.2
TARDBP-231ENST00000639599 COLGALT2Q8IYK4 626 aa16.28■□□□□ 0.2
TARDBP-231ENST00000639599 NSUN7Q8NE18 718 aaKnown RBP16.28■□□□□ 0.2
TARDBP-231ENST00000639599 FLCNQ8NFG4 579 aa16.28■□□□□ 0.2
TARDBP-231ENST00000639599 VN1R3Q9BXE9 311 aa16.28■□□□□ 0.2
TARDBP-231ENST00000639599 C2orf40Q9H1Z8 148 aa16.28■□□□□ 0.2
TARDBP-231ENST00000639599 NXF3Q9H4D5 531 aaKnown RBP16.28■□□□□ 0.2
TARDBP-231ENST00000639599 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.28■□□□□ 0.2
TARDBP-231ENST00000639599 FAM86C1Q9NVL1 165 aa16.28■□□□□ 0.2
TARDBP-231ENST00000639599 PRMT7Q9NVM4 692 aaPredicted RBP16.28■□□□□ 0.2
TARDBP-231ENST00000639599 ARHGEF35A5YM69 484 aa16.27■□□□□ 0.2
TARDBP-231ENST00000639599 POTEMA6NI47 508 aa16.27■□□□□ 0.2
TARDBP-231ENST00000639599 STK25O00506 426 aa16.27■□□□□ 0.2
TARDBP-231ENST00000639599 TADA2AO75478 443 aa16.27■□□□□ 0.2
TARDBP-231ENST00000639599 PDGFBP01127 241 aaPredicted RBP16.27■□□□□ 0.2
TARDBP-231ENST00000639599 FDPSP14324 419 aaKnown RBP16.27■□□□□ 0.2
TARDBP-231ENST00000639599 ARF4P18085 180 aaPredicted RBP16.27■□□□□ 0.2
TARDBP-231ENST00000639599 LIG1P18858 919 aa16.27■□□□□ 0.2
TARDBP-231ENST00000639599 GLRA2P23416 452 aa16.27■□□□□ 0.2
TARDBP-231ENST00000639599 AKAP5P24588 427 aa16.27■□□□□ 0.2
TARDBP-231ENST00000639599 IFNLR1Q8IU57 520 aaPredicted RBP16.27■□□□□ 0.2
TARDBP-231ENST00000639599 ZFP42Q96MM3 310 aa16.27■□□□□ 0.2
TARDBP-231ENST00000639599 HSD17B14Q9BPX1 270 aa16.27■□□□□ 0.2
TARDBP-231ENST00000639599 ADPGKQ9BRR6 497 aa16.27■□□□□ 0.2
TARDBP-231ENST00000639599 NFKBIZQ9BYH8 718 aa16.27■□□□□ 0.2
TARDBP-231ENST00000639599 RNF39Q9H2S5 420 aa16.27■□□□□ 0.2
TARDBP-231ENST00000639599 TUFT1Q9NNX1 390 aa16.27■□□□□ 0.2
TARDBP-231ENST00000639599 MARCH5Q9NX47 278 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms