RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 PPFIA4O75335 1185 aa20.42■□□□□ 0.86
CROCCP2-206ENST00000639594 RPS12P25398 132 aaKnown RBP20.42■□□□□ 0.86
CROCCP2-206ENST00000639594 NPTX2P47972 431 aa20.42■□□□□ 0.86
CROCCP2-206ENST00000639594 PRPF4BQ13523 1007 aaKnown RBP20.42■□□□□ 0.86
CROCCP2-206ENST00000639594 NBPF12Q5TAG4 269 aaPredicted RBP20.42■□□□□ 0.86
CROCCP2-206ENST00000639594 CCDC26Q8TAB7 109 aa20.42■□□□□ 0.86
CROCCP2-206ENST00000639594 SEMA4DQ92854 862 aa20.42■□□□□ 0.86
CROCCP2-206ENST00000639594 KREMEN1Q96MU8 473 aa20.42■□□□□ 0.86
CROCCP2-206ENST00000639594 PCDHB18PQ96TA0 734 aa20.42■□□□□ 0.86
CROCCP2-206ENST00000639594 RNF146Q9NTX7 359 aa20.42■□□□□ 0.86
CROCCP2-206ENST00000639594 CNOT7Q9UIV1 285 aaKnown RBP20.42■□□□□ 0.86
CROCCP2-206ENST00000639594 PLAAQ9Y263 795 aa20.42■□□□□ 0.86
CROCCP2-206ENST00000639594 DIS3Q9Y2L1 958 aaKnown RBP20.42■□□□□ 0.86
CROCCP2-206ENST00000639594 DAPK3O43293 454 aa20.42■□□□□ 0.86
CROCCP2-206ENST00000639594 CHRNB2P17787 502 aa20.42■□□□□ 0.86
CROCCP2-206ENST00000639594 SOX10P56693 466 aa20.42■□□□□ 0.86
CROCCP2-206ENST00000639594 ZNF211Q13398 564 aaPredicted RBP20.42■□□□□ 0.86
CROCCP2-206ENST00000639594 SNRNP35Q16560 246 aaKnown RBP20.42■□□□□ 0.86
CROCCP2-206ENST00000639594 TTC19Q6DKK2 380 aaPredicted RBP20.42■□□□□ 0.86
CROCCP2-206ENST00000639594 RHOT2Q8IXI1 618 aa20.42■□□□□ 0.86
CROCCP2-206ENST00000639594 RNPC3Q96LT9 517 aaKnown RBP20.42■□□□□ 0.86
CROCCP2-206ENST00000639594 MOV10L1Q9BXT6 1211 aaKnown RBP20.42■□□□□ 0.86
CROCCP2-206ENST00000639594 RSPH14Q9UHP6 348 aa20.42■□□□□ 0.86
CROCCP2-206ENST00000639594 USP20Q9Y2K6 914 aa20.42■□□□□ 0.86
CROCCP2-206ENST00000639594 ALG6Q9Y672 507 aa20.42■□□□□ 0.86
CROCCP2-206ENST00000639594 PMM2O15305 246 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 HADHBP55084 474 aaKnown RBP20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 SKOR1P84550 965 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 POU5F1Q01860 360 aaKnown RBP20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 MAATS1Q7Z4T9 603 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 ADAT2Q7Z6V5 191 aaKnown RBP20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 NOP9Q86U38 636 aaKnown RBP20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 BSNDQ8WZ55 320 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 ALG3Q92685 438 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 CCDC127Q96BQ5 260 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 POP1Q99575 1024 aaKnown RBP20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 SYT17Q9BSW7 474 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 CARD9Q9H257 536 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 ACP6Q9NPH0 428 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 CTTNBP2NLQ9P2B4 639 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 HACL1Q9UJ83 578 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 EXOC7Q9UPT5 735 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 GRIN2DO15399 1336 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 CNGA1P29973 690 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 FLT3P36888 993 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 HSD17B3P37058 310 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 SMTNP53814 917 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 MCCD1P59942 119 aaPredicted RBP20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 GNGT1P63211 74 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 UAP1Q16222 522 aaPredicted RBP20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 SRLQ86TD4 932 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 VSIG10LQ86VR7 867 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 MAP4K3Q8IVH8 894 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 FAM71AQ8IYT1 594 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 PPM1KQ8N3J5 372 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 SLC17A8Q8NDX2 589 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 TMOD4Q9NZQ9 345 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 CHORDC1Q9UHD1 332 aaPredicted RBP20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 NOCTQ9UK39 431 aaKnown RBP20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 PCDHA10Q9Y5I2 948 aa20.41■□□□□ 0.86
CROCCP2-206ENST00000639594 DENND3A2RUS2 1198 aa20.4■□□□□ 0.86
CROCCP2-206ENST00000639594 RTN2O75298 545 aa20.4■□□□□ 0.86
CROCCP2-206ENST00000639594 NR3C2P08235 984 aa20.4■□□□□ 0.86
CROCCP2-206ENST00000639594 CCND2P30279 289 aa20.4■□□□□ 0.86
CROCCP2-206ENST00000639594 GPC5P78333 572 aa20.4■□□□□ 0.86
CROCCP2-206ENST00000639594 DMP1Q13316 513 aaPredicted RBP20.4■□□□□ 0.86
CROCCP2-206ENST00000639594 NLRX1Q86UT6 975 aa20.4■□□□□ 0.86
CROCCP2-206ENST00000639594 EPS8L1Q8TE68 723 aa20.4■□□□□ 0.86
CROCCP2-206ENST00000639594 PARD3BQ8TEW8 1205 aa20.4■□□□□ 0.86
CROCCP2-206ENST00000639594 ERVK-5Q9HDB9 667 aa20.4■□□□□ 0.86
CROCCP2-206ENST00000639594 KMT5AQ9NQR1 393 aa20.4■□□□□ 0.86
CROCCP2-206ENST00000639594 GABBR1Q9UBS5 961 aa20.4■□□□□ 0.86
CROCCP2-206ENST00000639594 RRP15Q9Y3B9 282 aaKnown RBP20.4■□□□□ 0.86
CROCCP2-206ENST00000639594 TELO2Q9Y4R8 837 aa20.4■□□□□ 0.86
CROCCP2-206ENST00000639594 CYP26A1O43174 497 aa20.39■□□□□ 0.86
CROCCP2-206ENST00000639594 ZNF862O60290 1169 aa20.39■□□□□ 0.86
CROCCP2-206ENST00000639594 COPB2P35606 906 aa20.39■□□□□ 0.86
CROCCP2-206ENST00000639594 BACE1P56817 501 aa20.39■□□□□ 0.86
CROCCP2-206ENST00000639594 SKIDA1Q1XH10 827 aa20.39■□□□□ 0.86
CROCCP2-206ENST00000639594 AADACL2Q6P093 401 aa20.39■□□□□ 0.86
CROCCP2-206ENST00000639594 SLC39A4Q6P5W5 647 aa20.39■□□□□ 0.86
CROCCP2-206ENST00000639594 SLC47A2Q86VL8 602 aa20.39■□□□□ 0.86
CROCCP2-206ENST00000639594 SEC14L1Q92503 715 aa20.39■□□□□ 0.86
CROCCP2-206ENST00000639594 TRIM51Q9BSJ1 452 aa20.39■□□□□ 0.86
CROCCP2-206ENST00000639594 PNMA2Q9UL42 364 aa20.39■□□□□ 0.86
CROCCP2-206ENST00000639594 TMEM110-MUSTN1A8MSY1 372 aa20.39■□□□□ 0.85
CROCCP2-206ENST00000639594 FDX1P10109 184 aa20.39■□□□□ 0.85
CROCCP2-206ENST00000639594 ATP1A2P50993 1020 aa20.39■□□□□ 0.85
CROCCP2-206ENST00000639594 TCEAL1Q15170 157 aa20.39■□□□□ 0.85
CROCCP2-206ENST00000639594 REPS2Q8NFH8 660 aa20.39■□□□□ 0.85
CROCCP2-206ENST00000639594 RDM1Q8NG50 284 aa20.39■□□□□ 0.85
CROCCP2-206ENST00000639594 ZKSCAN4Q969J2 545 aaPredicted RBP20.39■□□□□ 0.85
CROCCP2-206ENST00000639594 CEP170P1Q96L14 293 aa20.39■□□□□ 0.85
CROCCP2-206ENST00000639594 SENP7Q9BQF6 1050 aa20.39■□□□□ 0.85
CROCCP2-206ENST00000639594 DPH5Q9H2P9 285 aa20.39■□□□□ 0.85
CROCCP2-206ENST00000639594 TOPORSQ9NS56 1045 aaPredicted RBP20.39■□□□□ 0.85
CROCCP2-206ENST00000639594 PFASO15067 1338 aa20.39■□□□□ 0.85
CROCCP2-206ENST00000639594 EIF3HO15372 352 aaKnown RBP eCLIP20.38■□□□□ 0.85
CROCCP2-206ENST00000639594 STBD1O95210 358 aa20.38■□□□□ 0.85
CROCCP2-206ENST00000639594 PTENP60484 403 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms