RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 LARP1BQ659C4 914 aaKnown RBP19.62■□□□□ 0.73
PNKP-230ENST00000638016 VPS52Q8N1B4 723 aa19.62■□□□□ 0.73
PNKP-230ENST00000638016 SMRP1Q8NCR6 262 aa19.62■□□□□ 0.73
PNKP-230ENST00000638016 URGCPQ8TCY9 931 aa19.62■□□□□ 0.73
PNKP-230ENST00000638016 TMEM169Q96HH4 297 aa19.62■□□□□ 0.73
PNKP-230ENST00000638016 ZBP1Q9H171 429 aa19.62■□□□□ 0.73
PNKP-230ENST00000638016 CACNG4Q9UBN1 327 aa19.62■□□□□ 0.73
PNKP-230ENST00000638016 CDH22Q9UJ99 828 aa19.62■□□□□ 0.73
PNKP-230ENST00000638016 CNTNAP2Q9UHC6 1331 aa19.61■□□□□ 0.73
PNKP-230ENST00000638016 C2orf71A6NGG8 1288 aa19.61■□□□□ 0.73
PNKP-230ENST00000638016 ARL5CA6NH57 179 aa19.61■□□□□ 0.73
PNKP-230ENST00000638016 PRPHP41219 470 aa19.61■□□□□ 0.73
PNKP-230ENST00000638016 DTHD1Q6ZMT9 781 aa19.61■□□□□ 0.73
PNKP-230ENST00000638016 CCDC51Q96ER9 411 aa19.61■□□□□ 0.73
PNKP-230ENST00000638016 PNMA5Q96PV4 448 aa19.61■□□□□ 0.73
PNKP-230ENST00000638016 RUSC1Q9BVN2 902 aa19.61■□□□□ 0.73
PNKP-230ENST00000638016 CCDC113Q9H0I3 377 aa19.61■□□□□ 0.73
PNKP-230ENST00000638016 CXCL16Q9H2A7 254 aa19.61■□□□□ 0.73
PNKP-230ENST00000638016 FZD8Q9H461 694 aa19.61■□□□□ 0.73
PNKP-230ENST00000638016 MARCH5Q9NX47 278 aa19.61■□□□□ 0.73
PNKP-230ENST00000638016 KLK14Q9P0G3 267 aa19.61■□□□□ 0.73
PNKP-230ENST00000638016 RAPGEFL1Q9UHV5 662 aa19.61■□□□□ 0.73
PNKP-230ENST00000638016 PRG3Q9Y2Y8 225 aaPredicted RBP19.61■□□□□ 0.73
PNKP-230ENST00000638016 A0A1B0GUA9 196 aa19.6■□□□□ 0.73
PNKP-230ENST00000638016 VWA3AA6NCI4 1184 aa19.6■□□□□ 0.73
PNKP-230ENST00000638016 LAD1O00515 517 aa19.6■□□□□ 0.73
PNKP-230ENST00000638016 EYA4O95677 639 aa19.6■□□□□ 0.73
PNKP-230ENST00000638016 MUTP22033 750 aa19.6■□□□□ 0.73
PNKP-230ENST00000638016 COASYQ13057 564 aa19.6■□□□□ 0.73
PNKP-230ENST00000638016 CUL4AQ13619 759 aa19.6■□□□□ 0.73
PNKP-230ENST00000638016 SMC1AQ14683 1233 aaKnown RBP19.6■□□□□ 0.73
PNKP-230ENST00000638016 PCBP1Q15365 356 aaKnown RBP eCLIP19.6■□□□□ 0.73
PNKP-230ENST00000638016 KRT79Q5XKE5 535 aa19.6■□□□□ 0.73
PNKP-230ENST00000638016 EEF1DP3Q658K8 133 aa19.6■□□□□ 0.73
PNKP-230ENST00000638016 PDE12Q6L8Q7 609 aaKnown RBP19.6■□□□□ 0.73
PNKP-230ENST00000638016 PPP4R3CPQ6ZMV5 832 aa19.6■□□□□ 0.73
PNKP-230ENST00000638016 ZBTB8OSQ8IWT0 167 aa19.6■□□□□ 0.73
PNKP-230ENST00000638016 DAW1Q8N136 415 aa19.6■□□□□ 0.73
PNKP-230ENST00000638016 MRPL43Q8N983 215 aaKnown RBP19.6■□□□□ 0.73
PNKP-230ENST00000638016 FEZF2Q8TBJ5 459 aa19.6■□□□□ 0.73
PNKP-230ENST00000638016 TRIM6Q9C030 488 aaPredicted RBP19.6■□□□□ 0.73
PNKP-230ENST00000638016 PDZD7Q9H5P4 517 aa19.6■□□□□ 0.73
PNKP-230ENST00000638016 NGRNQ9NPE2 291 aaKnown RBP19.6■□□□□ 0.73
PNKP-230ENST00000638016 USP15Q9Y4E8 981 aaPredicted RBP19.6■□□□□ 0.73
PNKP-230ENST00000638016 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.6■□□□□ 0.73
PNKP-230ENST00000638016 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.59■□□□□ 0.73
PNKP-230ENST00000638016 FAM86C2PA6NEL3 165 aa19.59■□□□□ 0.73
PNKP-230ENST00000638016 NRP1O14786 923 aa19.59■□□□□ 0.73
PNKP-230ENST00000638016 CLASP2O75122 1294 aaKnown RBP19.59■□□□□ 0.73
PNKP-230ENST00000638016 SSBP05455 408 aaKnown RBP eCLIP19.59■□□□□ 0.73
PNKP-230ENST00000638016 PRKCBP05771 671 aa19.59■□□□□ 0.73
PNKP-230ENST00000638016 NAMPTP43490 491 aa19.59■□□□□ 0.73
PNKP-230ENST00000638016 GRIN1Q05586 938 aa19.59■□□□□ 0.73
PNKP-230ENST00000638016 SLC27A1Q6PCB7 646 aa19.59■□□□□ 0.73
PNKP-230ENST00000638016 ADHFE1Q8IWW8 467 aa19.59■□□□□ 0.73
PNKP-230ENST00000638016 COLGALT2Q8IYK4 626 aa19.59■□□□□ 0.73
PNKP-230ENST00000638016 GSTCDQ8NEC7 633 aa19.59■□□□□ 0.73
PNKP-230ENST00000638016 DEPTORQ8TB45 409 aa19.59■□□□□ 0.73
PNKP-230ENST00000638016 RABGGTAQ92696 567 aa19.59■□□□□ 0.73
PNKP-230ENST00000638016 RAB34Q9BZG1 259 aa19.59■□□□□ 0.73
PNKP-230ENST00000638016 FOXD4L1Q9NU39 408 aa19.59■□□□□ 0.73
PNKP-230ENST00000638016 PRMT7Q9NVM4 692 aaPredicted RBP19.59■□□□□ 0.73
PNKP-230ENST00000638016 HCFC2Q9Y5Z7 792 aa19.59■□□□□ 0.73
PNKP-230ENST00000638016 HIP1RO75146 1068 aa19.58■□□□□ 0.72
PNKP-230ENST00000638016 CXCL14O95715 111 aa19.58■□□□□ 0.72
PNKP-230ENST00000638016 NCBP1Q09161 790 aaKnown RBP19.58■□□□□ 0.72
PNKP-230ENST00000638016 MAPK7Q13164 816 aa19.58■□□□□ 0.72
PNKP-230ENST00000638016 FAM187BQ17R55 369 aa19.58■□□□□ 0.72
PNKP-230ENST00000638016 SYCE2Q6PIF2 218 aa19.58■□□□□ 0.72
PNKP-230ENST00000638016 DDX53Q86TM3 631 aaKnown RBP19.58■□□□□ 0.72
PNKP-230ENST00000638016 CNNM3Q8NE01 707 aa19.58■□□□□ 0.72
PNKP-230ENST00000638016 LRRC15Q8TF66 581 aa19.58■□□□□ 0.72
PNKP-230ENST00000638016 FAM193BQ96PV7 902 aaPredicted RBP19.58■□□□□ 0.72
PNKP-230ENST00000638016 CDCA3Q99618 268 aaPredicted RBP19.58■□□□□ 0.72
PNKP-230ENST00000638016 C11orf16Q9NQ32 467 aa19.58■□□□□ 0.72
PNKP-230ENST00000638016 PARP2Q9UGN5 583 aa19.58■□□□□ 0.72
PNKP-230ENST00000638016 FAN1Q9Y2M0 1017 aa19.58■□□□□ 0.72
PNKP-230ENST00000638016 VPS37CA5D8V6 355 aaPredicted RBP19.57■□□□□ 0.72
PNKP-230ENST00000638016 C19orf67A6NJJ6 358 aa19.57■□□□□ 0.72
PNKP-230ENST00000638016 INPPL1O15357 1258 aa19.57■□□□□ 0.72
PNKP-230ENST00000638016 CTSAP10619 480 aa19.57■□□□□ 0.72
PNKP-230ENST00000638016 OR1G1P47890 313 aa19.57■□□□□ 0.72
PNKP-230ENST00000638016 DSC1Q08554 894 aa19.57■□□□□ 0.72
PNKP-230ENST00000638016 RAD51AP2Q09MP3 1159 aa19.57■□□□□ 0.72
PNKP-230ENST00000638016 PRPF4BQ13523 1007 aaKnown RBP19.57■□□□□ 0.72
PNKP-230ENST00000638016 MAPK6Q16659 721 aa19.57■□□□□ 0.72
PNKP-230ENST00000638016 TMEM132AQ24JP5 1023 aa19.57■□□□□ 0.72
PNKP-230ENST00000638016 RINT1Q6NUQ1 792 aa19.57■□□□□ 0.72
PNKP-230ENST00000638016 ANKRD54Q6NXT1 300 aa19.57■□□□□ 0.72
PNKP-230ENST00000638016 KANK3Q6NY19 840 aa19.57■□□□□ 0.72
PNKP-230ENST00000638016 TAS1R1Q7RTX1 841 aa19.57■□□□□ 0.72
PNKP-230ENST00000638016 RSPH1Q8WYR4 309 aa19.57■□□□□ 0.72
PNKP-230ENST00000638016 PRIMPOLQ96LW4 560 aa19.57■□□□□ 0.72
PNKP-230ENST00000638016 TMEM175Q9BSA9 504 aa19.57■□□□□ 0.72
PNKP-230ENST00000638016 C2orf40Q9H1Z8 148 aa19.57■□□□□ 0.72
PNKP-230ENST00000638016 KANSL3Q9P2N6 904 aa19.57■□□□□ 0.72
PNKP-230ENST00000638016 DNM3Q9UQ16 869 aa19.57■□□□□ 0.72
PNKP-230ENST00000638016 FAM50BQ9Y247 325 aa19.57■□□□□ 0.72
PNKP-230ENST00000638016 MYH11P35749 1972 aa19.56■□□□□ 0.72
PNKP-230ENST00000638016 TRIP11Q15643 1979 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms