RNA–Protein interactions for RNA: ENST00000637628.1

CHRNA4-220, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-220ENST00000637628 CRTC1Q6UUV9 634 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 BTNL9Q6UXG8 535 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 RTN4RL1Q86UN2 441 aaPredicted RBP3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 RPAP2Q8IXW5 612 aaPredicted RBP3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 LRRC71Q8N4P6 559 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 FIBCD1Q8N539 461 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 NGEFQ8N5V2 710 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 FANCBQ8NB91 859 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 KREMEN2Q8NCW0 462 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 TTLL11Q8NHH1 800 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 MOSPD2Q8NHP6 518 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 SP7Q8TDD2 431 aaPredicted RBP3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 STYXQ8WUJ0 223 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 RGMAQ96B86 450 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 EAF2Q96CJ1 260 aaPredicted RBP3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 ASIC4Q96FT7 647 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 CALML4Q96GE6 196 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 RBM18Q96H35 190 aaKnown RBP3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 COG8Q96MW5 612 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 MOGAT1Q96PD6 335 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 TSGA13Q96PP4 275 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 FNBP1Q96RU3 617 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 C7orf25Q9BPX7 421 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 PI4K2AQ9BTU6 479 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 ACAT2Q9BWD1 397 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 CCDC86Q9H6F5 360 aaKnown RBP3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 SYNCQ9H7C4 482 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 IPPKQ9H8X2 491 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 EPB41L4AQ9HCS5 686 aaPredicted RBP3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 SEPSECSQ9HD40 501 aaKnown RBP3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 SAYSD1Q9NPB0 183 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 GPR27Q9NS67 375 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 KCTD5Q9NXV2 234 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 SRP68Q9UHB9 627 aaKnown RBP3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 DUSP12Q9UNI6 340 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 CNPY2Q9Y2B0 182 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 ATP6V0A2Q9Y487 856 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 PCDHB12Q9Y5F1 795 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 WASF2Q9Y6W5 498 aa3.8□□□□□ -1.8
CHRNA4-220ENST00000637628 TDRD9Q8NDG6 1382 aaKnown RBP3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 A0A088AWK7 358 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 LRRC14BA6NHZ5 514 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 TTLL8A6PVC2 850 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 NT5C1B-RDH14C9J2C7 533 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 PI4K2BG5E9Z4 385 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 STXBP3O00186 592 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 PODXLO00592 558 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 HTRA2O43464 458 aaPredicted RBP3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 TSPAN3O60637 253 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 TMEM63AO94886 807 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 TNFRSF6BO95407 300 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 SCGB1D1O95968 90 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 CYP17A1P05093 508 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 ATP5BP06576 529 aaKnown RBP3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 THBDP07204 575 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 CCDC175P0C221 793 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 SRGAP2BP0DMP2 458 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 KITP10721 976 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 RXRAP19793 462 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 FGFR2P21802 821 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 ARL3P36405 182 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 NNMTP40261 264 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 ADH7P40394 386 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 STAT5AP42229 794 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 USP11P51784 963 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 MAP2K6P52564 334 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 KIF11P52732 1056 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 GPLD1P80108 840 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 RBP5P82980 135 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 IL1RL1Q01638 556 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 FMO1Q01740 532 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 TFCP2Q12800 502 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 EFR3AQ14156 821 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 COG2Q14746 738 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 UBE3CQ15386 1083 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 ZKSCAN8Q15776 578 aaPredicted RBP3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 CNGA2Q16280 664 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 ATP2B3Q16720 1220 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 PLA2G2CQ5R387 149 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 ZNF362Q5T0B9 420 aaPredicted RBP3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 SNX30Q5VWJ9 437 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 TANGO2Q6ICL3 276 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 IRGCQ6NXR0 463 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 CCDC62Q6P9F0 684 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 CNKSR3Q6P9H4 555 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 KLHL17Q6TDP4 642 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 KDELC1Q6UW63 502 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 USP51Q70EK9 711 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 C16orf59Q7L2K0 433 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 OTUD6AQ7L8S5 288 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 OTOP1Q7RTM1 612 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 R3HCC1LQ7Z5L2 792 aaKnown RBP3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 RAB44Q7Z6P3 723 aaPredicted RBP3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 PRPF39Q86UA1 669 aaKnown RBP3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 SESTD1Q86VW0 696 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 RAB11FIP4Q86YS3 637 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 HID1Q8IV36 788 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 ZZZ3Q8IYH5 903 aa3.79□□□□□ -1.8
CHRNA4-220ENST00000637628 TAGAPQ8N103 731 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms