RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 PCDHB13Q9Y5F0 798 aa16.71■□□□□ 0.27
CACNA1A-235ENST00000637004 FRMPD2Q68DX3 1309 aaPredicted RBP16.71■□□□□ 0.27
CACNA1A-235ENST00000637004 PNMA6FA0A0J9YX94 578 aa16.71■□□□□ 0.27
CACNA1A-235ENST00000637004 CASP4P49662 377 aa16.71■□□□□ 0.27
CACNA1A-235ENST00000637004 SETDB1Q15047 1291 aa16.71■□□□□ 0.27
CACNA1A-235ENST00000637004 INTS8Q75QN2 995 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-235ENST00000637004 CDC42EP4Q9H3Q1 356 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-235ENST00000637004 ETAA1Q9NY74 926 aa16.71■□□□□ 0.27
CACNA1A-235ENST00000637004 NKIRAS1Q9NYS0 192 aa16.71■□□□□ 0.27
CACNA1A-235ENST00000637004 COG5Q9UP83 839 aa16.71■□□□□ 0.27
CACNA1A-235ENST00000637004 LRRD1A4D1F6 860 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 BRAFP15056 766 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 GNAZP19086 355 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 COILP38432 576 aaPredicted RBP16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 NOVP48745 357 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 CTCFP49711 727 aaPredicted RBP16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 RRP1BQ14684 758 aaKnown RBP16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 MTFR1Q15390 333 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 ZNF568Q3ZCX4 644 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 TRIM68Q6AZZ1 485 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 RPS6KC1Q96S38 1066 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 LRMDAQ9H2I8 198 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 ARHGEF10LQ9HCE6 1279 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 DNM3Q9UQ16 869 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 POTEFA5A3E0 1075 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 MPHOSPH10O00566 681 aaKnown RBP16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 MMP10P09238 476 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 POTEIP0CG38 1075 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 POTEJP0CG39 1038 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 PCK1P35558 622 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 STRN3Q13033 797 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 AADACL2Q6P093 401 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 POTEEQ6S8J3 1075 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 CLEC4GQ6UXB4 293 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 GDAP1Q8TB36 358 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 PIGOQ8TEQ8 1089 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 CTTNBP2NLQ9P2B4 639 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 NARFQ9UHQ1 456 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 TAF1LQ8IZX4 1826 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 ASTN1O14525 1302 aa16.7■□□□□ 0.26
CACNA1A-235ENST00000637004 MED24O75448 989 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 ACSL3O95573 720 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 POTEGQ6S5H5 508 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 ERMNQ8TAM6 284 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 MORC4Q8TE76 937 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 STK32AQ8WU08 396 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 TSC22D3Q99576 134 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 REEP2Q9BRK0 252 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 CREB1P16220 341 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 PSMC2P35998 433 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 PPP1R21Q6ZMI0 780 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 ECHDC2Q86YB7 292 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 SLFN12Q8IYM2 578 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 SYT2Q8N9I0 419 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 KRT35Q92764 455 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 WNT8AQ9H1J5 351 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 MLXIPLQ9NP71 852 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 PTPN22Q9Y2R2 807 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 C10orf71Q711Q0 1435 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 ECEL1O95672 775 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 ATP6V1C1P21283 382 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 NFIXQ14938 502 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 TCEAL1Q15170 157 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 THEMIS2Q5TEJ8 643 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 VSIG1Q86XK7 387 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 FAM186BQ8IYM0 893 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 DDX23Q9BUQ8 820 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 PITPNM3Q9BZ71 974 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 CYP39A1Q9NYL5 469 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 WHRNQ9P202 907 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 CTNNAL1Q9UBT7 734 aa16.69■□□□□ 0.26
CACNA1A-235ENST00000637004 TTC36A6NLP5 189 aa16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 GCNT3O95395 438 aa16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 EYA4O95677 639 aa16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 SSR1P43307 286 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 RAD23BP54727 409 aa16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 TMEM237Q96Q45 408 aa16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 PSTPIP2Q9H939 334 aa16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 TAS2R14Q9NYV8 317 aa16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 FRMPD4Q14CM0 1322 aa16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 DPPA5A6NC42 116 aa16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 ANKRD63C9JTQ0 380 aa16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 CLIC2O15247 247 aa16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 SMIM24O75264 130 aa16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 TBCAO75347 108 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 FMO5P49326 533 aa16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 MXRA7P84157 204 aa16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 MGAT5Q09328 741 aa16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 PABPC4Q13310 644 aaKnown RBP eCLIP16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 LBRQ14739 615 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 TSNAXIP1Q2TAA8 658 aa16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 ANO7Q6IWH7 933 aa16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 MIGA2Q7L4E1 593 aa16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 SLC13A5Q86YT5 568 aaPredicted RBP16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 MFN1Q8IWA4 741 aa16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 ZDHHC14Q8IZN3 488 aa16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 INPP5DQ92835 1189 aa16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 UTP4Q969X6 686 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-235ENST00000637004 HGSO14964 777 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-235ENST00000637004 TCEA3O75764 348 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms