RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 URGCPQ8TCY9 931 aa14.03□□□□□ -0.16
CTSD-208ENST00000636843 PSPC1Q8WXF1 523 aaKnown RBP14.03□□□□□ -0.16
CTSD-208ENST00000636843 CEP170P1Q96L14 293 aa14.03□□□□□ -0.16
CTSD-208ENST00000636843 IRF2BPLQ9H1B7 796 aa14.03□□□□□ -0.16
CTSD-208ENST00000636843 RBSNQ9H1K0 784 aa14.03□□□□□ -0.16
CTSD-208ENST00000636843 AGPAT5Q9NUQ2 364 aa14.03□□□□□ -0.16
CTSD-208ENST00000636843 ORC3Q9UBD5 711 aaPredicted RBP14.03□□□□□ -0.16
CTSD-208ENST00000636843 SORCS3Q9UPU3 1222 aa14.03□□□□□ -0.16
CTSD-208ENST00000636843 PCDHB2Q9Y5E7 798 aa14.03□□□□□ -0.16
CTSD-208ENST00000636843 CNTNAP2Q9UHC6 1331 aa14.02□□□□□ -0.16
CTSD-208ENST00000636843 C2CD4DB7Z1M9 353 aa14.02□□□□□ -0.16
CTSD-208ENST00000636843 ASAP2O43150 1006 aa14.02□□□□□ -0.16
CTSD-208ENST00000636843 AVPR2P30518 371 aa14.02□□□□□ -0.16
CTSD-208ENST00000636843 NUBP1P53384 320 aa14.02□□□□□ -0.16
CTSD-208ENST00000636843 EPHA7Q15375 998 aa14.02□□□□□ -0.16
CTSD-208ENST00000636843 LONRF3Q496Y0 759 aa14.02□□□□□ -0.16
CTSD-208ENST00000636843 ATAT1Q5SQI0 421 aa14.02□□□□□ -0.16
CTSD-208ENST00000636843 KIAA1841Q6NSI8 718 aa14.02□□□□□ -0.16
CTSD-208ENST00000636843 FAM173BQ6P4H8 233 aa14.02□□□□□ -0.16
CTSD-208ENST00000636843 OTUD6AQ7L8S5 288 aa14.02□□□□□ -0.16
CTSD-208ENST00000636843 PPFIBP1Q86W92 1011 aa14.02□□□□□ -0.16
CTSD-208ENST00000636843 SLC22A17Q8WUG5 538 aa14.02□□□□□ -0.16
CTSD-208ENST00000636843 TCP11Q8WWU5 503 aa14.02□□□□□ -0.16
CTSD-208ENST00000636843 PRPF31Q8WWY3 499 aaKnown RBP14.02□□□□□ -0.16
CTSD-208ENST00000636843 AUTS2Q8WXX7 1259 aa14.02□□□□□ -0.16
CTSD-208ENST00000636843 C8orf76Q96K31 380 aa14.02□□□□□ -0.16
CTSD-208ENST00000636843 KANSL3Q9P2N6 904 aa14.02□□□□□ -0.16
CTSD-208ENST00000636843 CDH22Q9UJ99 828 aa14.02□□□□□ -0.16
CTSD-208ENST00000636843 STK36Q9NRP7 1315 aa14.01□□□□□ -0.17
CTSD-208ENST00000636843 MEIS3P2A8K0S8 358 aa14.01□□□□□ -0.17
CTSD-208ENST00000636843 MARCH6O60337 910 aa14.01□□□□□ -0.17
CTSD-208ENST00000636843 SLC11A1P49279 550 aa14.01□□□□□ -0.17
CTSD-208ENST00000636843 LAMTOR4Q0VGL1 99 aa14.01□□□□□ -0.17
CTSD-208ENST00000636843 TCF15Q12870 199 aa14.01□□□□□ -0.17
CTSD-208ENST00000636843 MTMR3Q13615 1198 aa14.01□□□□□ -0.17
CTSD-208ENST00000636843 AGMOQ6ZNB7 445 aa14.01□□□□□ -0.17
CTSD-208ENST00000636843 ZDHHC14Q8IZN3 488 aa14.01□□□□□ -0.17
CTSD-208ENST00000636843 PLCD3Q8N3E9 789 aa14.01□□□□□ -0.17
CTSD-208ENST00000636843 ZNF579Q8NAF0 562 aaKnown RBP14.01□□□□□ -0.17
CTSD-208ENST00000636843 BCL7CQ8WUZ0 217 aaPredicted RBP14.01□□□□□ -0.17
CTSD-208ENST00000636843 TMEM175Q9BSA9 504 aa14.01□□□□□ -0.17
CTSD-208ENST00000636843 GBP3Q9H0R5 595 aa14.01□□□□□ -0.17
CTSD-208ENST00000636843 TFIP11Q9UBB9 837 aaKnown RBP14.01□□□□□ -0.17
CTSD-208ENST00000636843 DNAJB4Q9UDY4 337 aa14.01□□□□□ -0.17
CTSD-208ENST00000636843 USTQ9Y2C2 406 aa14.01□□□□□ -0.17
CTSD-208ENST00000636843 CCNT1O60563 726 aaKnown RBP14□□□□□ -0.17
CTSD-208ENST00000636843 ALDH2P05091 517 aa14□□□□□ -0.17
CTSD-208ENST00000636843 SRGAP2CP0DJJ0 459 aa14□□□□□ -0.17
CTSD-208ENST00000636843 EPCAMP16422 314 aa14□□□□□ -0.17
CTSD-208ENST00000636843 HOXA11P31270 313 aaPredicted RBP14□□□□□ -0.17
CTSD-208ENST00000636843 VCPP55072 806 aaKnown RBP14□□□□□ -0.17
CTSD-208ENST00000636843 PTPN14Q15678 1187 aa14□□□□□ -0.17
CTSD-208ENST00000636843 PIK3AP1Q6ZUJ8 805 aa14□□□□□ -0.17
CTSD-208ENST00000636843 BRAPQ7Z569 592 aa14□□□□□ -0.17
CTSD-208ENST00000636843 CABP7Q86V35 215 aa14□□□□□ -0.17
CTSD-208ENST00000636843 ZNF280BQ86YH2 543 aa14□□□□□ -0.17
CTSD-208ENST00000636843 SLFN12Q8IYM2 578 aa14□□□□□ -0.17
CTSD-208ENST00000636843 C12orf76Q8N812 135 aaPredicted RBP14□□□□□ -0.17
CTSD-208ENST00000636843 TDRD5Q8NAT2 981 aaKnown RBP14□□□□□ -0.17
CTSD-208ENST00000636843 CNNM3Q8NE01 707 aa14□□□□□ -0.17
CTSD-208ENST00000636843 FBXO18Q8NFZ0 1043 aa14□□□□□ -0.17
CTSD-208ENST00000636843 HAS1Q92839 578 aa14□□□□□ -0.17
CTSD-208ENST00000636843 TMEM143Q96AN5 459 aa14□□□□□ -0.17
CTSD-208ENST00000636843 FAM193BQ96PV7 902 aaPredicted RBP14□□□□□ -0.17
CTSD-208ENST00000636843 PPP1R9BQ96SB3 815 aa14□□□□□ -0.17
CTSD-208ENST00000636843 PHOX2BQ99453 314 aa14□□□□□ -0.17
CTSD-208ENST00000636843 LXNQ9BS40 222 aa14□□□□□ -0.17
CTSD-208ENST00000636843 EMILIN2Q9BXX0 1053 aa14□□□□□ -0.17
CTSD-208ENST00000636843 MINDY3Q9H8M7 445 aa14□□□□□ -0.17
CTSD-208ENST00000636843 RSAD1Q9HA92 442 aa14□□□□□ -0.17
CTSD-208ENST00000636843 UBN1Q9NPG3 1134 aa14□□□□□ -0.17
CTSD-208ENST00000636843 WRAP73Q9P2S5 460 aaPredicted RBP14□□□□□ -0.17
CTSD-208ENST00000636843 DBR1Q9UK59 544 aaKnown RBP14□□□□□ -0.17
CTSD-208ENST00000636843 RCOR1Q9UKL0 485 aa14□□□□□ -0.17
CTSD-208ENST00000636843 CACNA1HO95180 2353 aa14□□□□□ -0.17
CTSD-208ENST00000636843 YWHABP31946 246 aaKnown RBP14□□□□□ -0.17
CTSD-208ENST00000636843 EMC2Q15006 297 aa14□□□□□ -0.17
CTSD-208ENST00000636843 PCBP1Q15365 356 aaKnown RBP eCLIP14□□□□□ -0.173e-9■■■□□ 15.5
CTSD-208ENST00000636843 RNF149Q8NC42 400 aa14□□□□□ -0.17
CTSD-208ENST00000636843 VN1R3Q9BXE9 311 aa14□□□□□ -0.17
CTSD-208ENST00000636843 ZSWIM4Q9H7M6 989 aa14□□□□□ -0.17
CTSD-208ENST00000636843 SFXN1Q9H9B4 322 aa14□□□□□ -0.17
CTSD-208ENST00000636843 DDX19AQ9NUU7 478 aaKnown RBP14□□□□□ -0.17
CTSD-208ENST00000636843 RGL1Q9NZL6 768 aa14□□□□□ -0.17
CTSD-208ENST00000636843 FAN1Q9Y2M0 1017 aa14□□□□□ -0.17
CTSD-208ENST00000636843 DDHD2O94830 711 aa13.99□□□□□ -0.17
CTSD-208ENST00000636843 WEE2P0C1S8 567 aa13.99□□□□□ -0.17
CTSD-208ENST00000636843 AXLP30530 894 aa13.99□□□□□ -0.17
CTSD-208ENST00000636843 MXD4Q14582 209 aaPredicted RBP13.99□□□□□ -0.17
CTSD-208ENST00000636843 UVSSAQ2YD98 709 aa13.99□□□□□ -0.17
CTSD-208ENST00000636843 XKR9Q5GH70 373 aa13.99□□□□□ -0.17
CTSD-208ENST00000636843 UBXN11Q5T124 520 aa13.99□□□□□ -0.17
CTSD-208ENST00000636843 NCAPH2Q6IBW4 605 aa13.99□□□□□ -0.17
CTSD-208ENST00000636843 OXER1Q8TDS5 423 aa13.99□□□□□ -0.17
CTSD-208ENST00000636843 WASF1Q92558 559 aa13.99□□□□□ -0.17
CTSD-208ENST00000636843 DYDC2Q96IM9 177 aa13.99□□□□□ -0.17
CTSD-208ENST00000636843 KLHL5Q96PQ7 755 aa13.99□□□□□ -0.17
CTSD-208ENST00000636843 MRPL17Q9NRX2 175 aaKnown RBP13.99□□□□□ -0.17
CTSD-208ENST00000636843 LIMD1Q9UGP4 676 aa13.99□□□□□ -0.17
CTSD-208ENST00000636843 NRP1O14786 923 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms