RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 KCTD10Q9H3F6 313 aa5.54□□□□□ -1.52
CLN5-212ENST00000636602 C1orf112Q9NSG2 853 aa5.54□□□□□ -1.52
CLN5-212ENST00000636602 DTLQ9NZJ0 730 aa5.54□□□□□ -1.52
CLN5-212ENST00000636602 BTBD7Q9P203 1132 aa5.54□□□□□ -1.52
CLN5-212ENST00000636602 DPP7Q9UHL4 492 aa5.54□□□□□ -1.52
CLN5-212ENST00000636602 EIF3JO75822 258 aaKnown RBP5.53□□□□□ -1.52
CLN5-212ENST00000636602 RGS3P49796 1198 aa5.53□□□□□ -1.52
CLN5-212ENST00000636602 ATXN1P54253 815 aaKnown RBP5.53□□□□□ -1.52
CLN5-212ENST00000636602 PICALMQ13492 652 aa5.53□□□□□ -1.52
CLN5-212ENST00000636602 MUM1Q2TAK8 710 aa5.53□□□□□ -1.52
CLN5-212ENST00000636602 COBLL1Q53SF7 1204 aa5.53□□□□□ -1.52
CLN5-212ENST00000636602 MBNL2Q5VZF2 373 aaKnown RBP5.53□□□□□ -1.52
CLN5-212ENST00000636602 CD276Q5ZPR3 534 aa5.53□□□□□ -1.52
CLN5-212ENST00000636602 B3GNT9Q6UX72 402 aa5.53□□□□□ -1.52
CLN5-212ENST00000636602 UNQ6494/PRO21346Q6UXR6 183 aa5.53□□□□□ -1.52
CLN5-212ENST00000636602 GRAMD1CQ8IYS0 662 aa5.53□□□□□ -1.52
CLN5-212ENST00000636602 THEMISQ8N1K5 641 aaPredicted RBP5.53□□□□□ -1.52
CLN5-212ENST00000636602 SVIPQ8NHG7 77 aa5.53□□□□□ -1.52
CLN5-212ENST00000636602 TTC17Q96AE7 1141 aa5.53□□□□□ -1.52
CLN5-212ENST00000636602 TAAR9Q96RI9 348 aa5.53□□□□□ -1.52
CLN5-212ENST00000636602 ZNF700Q9H0M5 742 aa5.53□□□□□ -1.52
CLN5-212ENST00000636602 PRDM12Q9H4Q4 367 aa5.53□□□□□ -1.52
CLN5-212ENST00000636602 MAN1C1Q9NR34 630 aa5.53□□□□□ -1.52
CLN5-212ENST00000636602 USP25Q9UHP3 1055 aa5.53□□□□□ -1.52
CLN5-212ENST00000636602 TUBD1Q9UJT1 453 aa5.53□□□□□ -1.52
CLN5-212ENST00000636602 FAM50BQ9Y247 325 aa5.53□□□□□ -1.52
CLN5-212ENST00000636602 NUMBLQ9Y6R0 609 aa5.53□□□□□ -1.52
CLN5-212ENST00000636602 PCDH8O95206 1070 aa5.52□□□□□ -1.53
CLN5-212ENST00000636602 POU2F2P09086 479 aa5.52□□□□□ -1.53
CLN5-212ENST00000636602 IFIT2P09913 472 aaKnown RBP5.52□□□□□ -1.53
CLN5-212ENST00000636602 MYBP10242 640 aa5.52□□□□□ -1.53
CLN5-212ENST00000636602 PTGS1P23219 599 aa5.52□□□□□ -1.53
CLN5-212ENST00000636602 LMO1P25800 156 aa5.52□□□□□ -1.53
CLN5-212ENST00000636602 STAT5AP42229 794 aa5.52□□□□□ -1.53
CLN5-212ENST00000636602 CCT2P78371 535 aaKnown RBP5.52□□□□□ -1.53
CLN5-212ENST00000636602 CDK17Q00537 523 aa5.52□□□□□ -1.53
CLN5-212ENST00000636602 ALDH6A1Q02252 535 aaKnown RBP5.52□□□□□ -1.53
CLN5-212ENST00000636602 SPIDRQ14159 915 aa5.52□□□□□ -1.53
CLN5-212ENST00000636602 TRIM25Q14258 630 aaKnown RBP5.52□□□□□ -1.53
CLN5-212ENST00000636602 IL31Q6EBC2 164 aa5.52□□□□□ -1.53
CLN5-212ENST00000636602 FAM126BQ8IXS8 530 aa5.52□□□□□ -1.53
CLN5-212ENST00000636602 SMC5Q8IY18 1101 aa5.52□□□□□ -1.53
CLN5-212ENST00000636602 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.52□□□□□ -1.53
CLN5-212ENST00000636602 PJA1Q8NG27 643 aa5.52□□□□□ -1.53
CLN5-212ENST00000636602 SLC39A13Q96H72 371 aa5.52□□□□□ -1.53
CLN5-212ENST00000636602 CRAMP1Q96RY5 1269 aa5.52□□□□□ -1.53
CLN5-212ENST00000636602 MAP3K14Q99558 947 aa5.52□□□□□ -1.53
CLN5-212ENST00000636602 ACE2Q9BYF1 805 aaPredicted RBP5.52□□□□□ -1.53
CLN5-212ENST00000636602 GTPBP4Q9BZE4 634 aaKnown RBP5.52□□□□□ -1.53
CLN5-212ENST00000636602 IFT122Q9HBG6 1241 aa5.52□□□□□ -1.53
CLN5-212ENST00000636602 SLC39A2Q9NP94 309 aa5.52□□□□□ -1.53
CLN5-212ENST00000636602 SERPINB13Q9UIV8 391 aa5.52□□□□□ -1.53
CLN5-212ENST00000636602 LDHAP00338 332 aaKnown RBP5.51□□□□□ -1.53
CLN5-212ENST00000636602 LRG1P02750 347 aa5.51□□□□□ -1.53
CLN5-212ENST00000636602 PFKMP08237 780 aa5.51□□□□□ -1.53
CLN5-212ENST00000636602 NEK3P51956 506 aa5.51□□□□□ -1.53
CLN5-212ENST00000636602 SLC16A1P53985 500 aa5.51□□□□□ -1.53
CLN5-212ENST00000636602 MLLT6P55198 1093 aaPredicted RBP5.51□□□□□ -1.53
CLN5-212ENST00000636602 PTH1RQ03431 593 aa5.51□□□□□ -1.53
CLN5-212ENST00000636602 PPARAQ07869 468 aa5.51□□□□□ -1.53
CLN5-212ENST00000636602 USP39Q53GS9 565 aaKnown RBP5.51□□□□□ -1.53
CLN5-212ENST00000636602 ATAT1Q5SQI0 421 aa5.51□□□□□ -1.53
CLN5-212ENST00000636602 TEPPQ6URK8 271 aa5.51□□□□□ -1.53
CLN5-212ENST00000636602 KANSL1Q7Z3B3 1105 aa5.51□□□□□ -1.53
CLN5-212ENST00000636602 KLHL36Q8N4N3 616 aa5.51□□□□□ -1.53
CLN5-212ENST00000636602 CAMKK1Q8N5S9 505 aa5.51□□□□□ -1.53
CLN5-212ENST00000636602 ZBTB34Q8NCN2 500 aa5.51□□□□□ -1.53
CLN5-212ENST00000636602 CALML6Q8TD86 181 aa5.51□□□□□ -1.53
CLN5-212ENST00000636602 FBXO41Q8TF61 875 aa5.51□□□□□ -1.53
CLN5-212ENST00000636602 TSPEARQ8WU66 669 aa5.51□□□□□ -1.53
CLN5-212ENST00000636602 RPGRQ92834 1020 aaKnown RBP5.51□□□□□ -1.53
CLN5-212ENST00000636602 HPS3Q969F9 1004 aa5.51□□□□□ -1.53
CLN5-212ENST00000636602 ZG16BQ96DA0 208 aa5.51□□□□□ -1.53
CLN5-212ENST00000636602 ADOQ96SZ5 270 aa5.51□□□□□ -1.53
CLN5-212ENST00000636602 ACO2Q99798 780 aaKnown RBP5.51□□□□□ -1.53
CLN5-212ENST00000636602 NGRNQ9NPE2 291 aaKnown RBP5.51□□□□□ -1.53
CLN5-212ENST00000636602 INCENPQ9NQS7 918 aa5.51□□□□□ -1.53
CLN5-212ENST00000636602 TMPRSS11EQ9UL52 423 aa5.51□□□□□ -1.53
CLN5-212ENST00000636602 MYPNQ86TC9 1320 aa5.5□□□□□ -1.53
CLN5-212ENST00000636602 APAF1O14727 1248 aa5.5□□□□□ -1.53
CLN5-212ENST00000636602 DTNBO60941 627 aa5.5□□□□□ -1.53
CLN5-212ENST00000636602 MPIG6BO95866 241 aa5.5□□□□□ -1.53
CLN5-212ENST00000636602 ENO2P09104 434 aaPredicted RBP5.5□□□□□ -1.53
CLN5-212ENST00000636602 PDCP20941 246 aa5.5□□□□□ -1.53
CLN5-212ENST00000636602 BCAR1P56945 870 aa5.5□□□□□ -1.53
CLN5-212ENST00000636602 PFKPQ01813 784 aa5.5□□□□□ -1.53
CLN5-212ENST00000636602 GALEQ14376 348 aa5.5□□□□□ -1.53
CLN5-212ENST00000636602 NOLC1Q14978 699 aaKnown RBP eCLIP5.5□□□□□ -1.53
CLN5-212ENST00000636602 SAFBQ15424 915 aaKnown RBP eCLIP5.5□□□□□ -1.53
CLN5-212ENST00000636602 CR1LQ2VPA4 569 aa5.5□□□□□ -1.53
CLN5-212ENST00000636602 LSM12Q3MHD2 195 aaKnown RBP5.5□□□□□ -1.53
CLN5-212ENST00000636602 LRCH2Q5VUJ6 765 aa5.5□□□□□ -1.53
CLN5-212ENST00000636602 LRSAM1Q6UWE0 723 aa5.5□□□□□ -1.53
CLN5-212ENST00000636602 USP45Q70EL2 814 aa5.5□□□□□ -1.53
CLN5-212ENST00000636602 OR14C36Q8NHC7 312 aa5.5□□□□□ -1.53
CLN5-212ENST00000636602 WDR48Q8TAF3 677 aa5.5□□□□□ -1.53
CLN5-212ENST00000636602 DIS3LQ8TF46 1054 aaKnown RBP5.5□□□□□ -1.53
CLN5-212ENST00000636602 RSAD2Q8WXG1 361 aa5.5□□□□□ -1.53
CLN5-212ENST00000636602 VOPP1Q96AW1 172 aa5.5□□□□□ -1.53
CLN5-212ENST00000636602 COA7Q96BR5 231 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms