RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 TTF1Q15361 905 aaPredicted RBP6.49□□□□□ -1.37
CHD2-221ENST00000635856 PPP1R2P3Q6NXS1 205 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 RFPL4BQ6ZWI9 263 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 RALYLQ86SE5 291 aaKnown RBP6.49□□□□□ -1.37
CHD2-221ENST00000635856 ZNF598Q86UK7 904 aaKnown RBP6.49□□□□□ -1.37
CHD2-221ENST00000635856 DDX42Q86XP3 938 aaKnown RBP eCLIP6.49□□□□□ -1.37
CHD2-221ENST00000635856 SUPT20HQ8NEM7 779 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 ATXN2LQ8WWM7 1075 aaKnown RBP6.49□□□□□ -1.37
CHD2-221ENST00000635856 PMM1Q92871 262 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 ATP2A3Q93084 1043 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 VTI1AQ96AJ9 217 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 FERD3LQ96RJ6 166 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 MEIS3Q99687 375 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 OLFM1Q99784 485 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 TBC1D10AQ9BXI6 508 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 RBM12Q9NTZ6 932 aaKnown RBP6.49□□□□□ -1.37
CHD2-221ENST00000635856 POLR3EQ9NVU0 708 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 DCAF16Q9NXF7 216 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 GABBR1Q9UBS5 961 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 USP20Q9Y2K6 914 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 MED14O60244 1454 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 PLA2R1Q13018 1463 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 CLTCL1P53675 1640 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 INO80B-WBP1J3KQ70 363 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 ACSL4O60488 711 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 PGM3O95394 542 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 KRT3P12035 628 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 ST13P50502 369 aaKnown RBP6.49□□□□□ -1.37
CHD2-221ENST00000635856 STX1BP61266 288 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 IL9RQ01113 521 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 CYP2U1Q7Z449 544 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 GPR141Q7Z602 305 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 CAND1Q86VP6 1230 aaKnown RBP6.49□□□□□ -1.37
CHD2-221ENST00000635856 U2AF1L4Q8WU68 220 aaKnown RBP6.49□□□□□ -1.37
CHD2-221ENST00000635856 CASKIN2Q8WXE0 1202 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 HPS1Q92902 700 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 NAP1L4Q99733 375 aaKnown RBP6.49□□□□□ -1.37
CHD2-221ENST00000635856 NEK6Q9HC98 313 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 KCNMB3Q9NPA1 279 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 NDFIP2Q9NV92 336 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 ZFP69BQ9UJL9 534 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 SLC30A1Q9Y6M5 507 aa6.49□□□□□ -1.37
CHD2-221ENST00000635856 GAKO14976 1311 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 PLEKHG3A1L390 1219 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 PCP11498 1178 aaKnown RBP6.48□□□□□ -1.37
CHD2-221ENST00000635856 CCNB1P14635 433 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 ATP6V1B1P15313 513 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 TCEA1P23193 301 aaKnown RBP6.48□□□□□ -1.37
CHD2-221ENST00000635856 TXKP42681 527 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 RNASE9P60153 205 aaKnown RBP6.48□□□□□ -1.37
CHD2-221ENST00000635856 STRN3Q13033 797 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 TTC39AQ5SRH9 613 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 KLHDC10Q6PID8 442 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 VASH1Q7L8A9 365 aaPredicted RBP6.48□□□□□ -1.37
CHD2-221ENST00000635856 EIF1ADQ8N9N8 165 aaKnown RBP6.48□□□□□ -1.37
CHD2-221ENST00000635856 RASSF5Q8WWW0 418 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 CFAP57Q96MR6 1250 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 KLHL42Q9P2K6 505 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 STX18Q9P2W9 335 aaKnown RBP6.48□□□□□ -1.37
CHD2-221ENST00000635856 CNOT8Q9UFF9 292 aaKnown RBP6.48□□□□□ -1.37
CHD2-221ENST00000635856 TBK1Q9UHD2 729 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 SLC12A7Q9Y666 1083 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 HECW2Q9P2P5 1572 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 A8MXQ7 604 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 AFPP02771 609 aaKnown RBP6.48□□□□□ -1.37
CHD2-221ENST00000635856 ALDH2P05091 517 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 KRT8P05787 483 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 P4HA1P13674 534 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 CENPAP49450 140 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 FXR1P51114 621 aaKnown RBP eCLIP6.48□□□□□ -1.375e-6■■■□□ 17
CHD2-221ENST00000635856 RNF43Q68DV7 783 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 PPP4R4Q6NUP7 873 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 NFRKBQ6P4R8 1299 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 BTN2A1Q7KYR7 527 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 RIC3Q7Z5B4 369 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 NOSTRINQ8IVI9 506 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 TCAIMQ8N3R3 496 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 LILRB4Q8NHJ6 448 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 ACAP3Q96P50 834 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 TGS1Q96RS0 853 aaKnown RBP6.48□□□□□ -1.37
CHD2-221ENST00000635856 EPB41L1Q9H4G0 881 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 ARMC1Q9NVT9 282 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 THAP1Q9NVV9 213 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 MRPL39Q9NYK5 338 aaKnown RBP6.48□□□□□ -1.37
CHD2-221ENST00000635856 AIPL1Q9NZN9 384 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 SEPT3Q9UH03 358 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 VANGL2Q9ULK5 521 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 GLI2P10070 1586 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 TSPOAP1O95153 1857 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 WDR91A4D1P6 747 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 ICMTO60725 284 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 GLI1P08151 1106 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 SPATA31D3P0C874 917 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 PTPN2P17706 415 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 JAK1P23458 1154 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 MAGEA1P43355 309 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 CASP5P51878 434 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 GNG2P59768 71 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 TRIM71Q2Q1W2 868 aaKnown RBP6.48□□□□□ -1.37
CHD2-221ENST00000635856 EGFLAMQ63HQ2 1017 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms