RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 DNAL1Q4LDG9 190 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 FRMD5Q7Z6J6 570 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 TRIM9Q9C026 710 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 NGRNQ9NPE2 291 aaKnown RBP12.39□□□□□ -0.43
COL11A1-211ENST00000635193 SMARCAL1Q9NZC9 954 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 AKT3Q9Y243 479 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 PITPNM2Q9BZ72 1349 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 POTEFA5A3E0 1075 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 USP17L15C9J2P7 530 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 USP17L13C9JLJ4 530 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 USP17L11C9JVI0 530 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 USP17L18D6R9N7 530 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 USP17L22D6RA61 530 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 USP17L17D6RBQ6 530 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 USP17L19D6RCP7 530 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 USP17L20D6RJB6 530 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 PI4K2BG5E9Z4 385 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 K7ERI5 159 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 POTEIP0CG38 1075 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 ACADSP16219 412 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 ZNF18P17022 549 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 VHLP40337 213 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 PRELPP51888 382 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 USP17L24Q0WX57 530 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 USP17L6PQ6QN14 398 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 POTEGQ6S5H5 508 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 POTEEQ6S8J3 1075 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 C4orf50Q6ZRC1 276 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 DCP1AQ9NPI6 582 aaPredicted RBP12.38□□□□□ -0.43
COL11A1-211ENST00000635193 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.38□□□□□ -0.43
COL11A1-211ENST00000635193 SUN2Q9UH99 717 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 CLRN2A0PK11 232 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 MAGEA13PA6NCF6 341 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 LDHAP00338 332 aaKnown RBP12.38□□□□□ -0.43
COL11A1-211ENST00000635193 COPS2P61201 443 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 KDSRQ06136 332 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 ZNF394Q53GI3 561 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 PPP6R3Q5H9R7 873 aaPredicted RBP12.38□□□□□ -0.43
COL11A1-211ENST00000635193 TMEM270Q6UE05 265 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 RHOT1Q8IXI2 618 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 BBS5Q8N3I7 341 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 VPS11Q9H270 941 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 SENP1Q9P0U3 644 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 ADCY10Q96PN6 1610 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 POLR1AO95602 1720 aaPredicted RBP12.38□□□□□ -0.43
COL11A1-211ENST00000635193 HLFQ16534 295 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 MMGT1Q8N4V1 131 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 PSPC1Q8WXF1 523 aaKnown RBP12.38□□□□□ -0.43
COL11A1-211ENST00000635193 FAM20AQ96MK3 541 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 CSADQ9Y600 493 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 PNPLA6Q8IY17 1366 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 CHEK2O96017 543 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 ENO1P06733 434 aaKnown RBP12.38□□□□□ -0.43
COL11A1-211ENST00000635193 GNAT1P11488 350 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 TAC1P20366 129 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 PADI6Q6TGC4 694 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 EXOC8Q8IYI6 725 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 PNKPQ96T60 521 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 VCPKMTQ9H867 229 aa12.38□□□□□ -0.43
COL11A1-211ENST00000635193 WDR17Q8IZU2 1322 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 SNAP23O00161 211 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 PDE5AO76074 875 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 RAP1GDS1P52306 607 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 DCAF4Q8WV16 495 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 TRABDQ9H4I3 376 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 LRRC4Q9HBW1 653 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 ZFATQ9P243 1243 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 PREX2Q70Z35 1606 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 RAD51CO43502 376 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 MYBL1P10243 752 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 CARSP49589 748 aaKnown RBP12.37□□□□□ -0.43
COL11A1-211ENST00000635193 RYBPQ8N488 228 aaPredicted RBP12.37□□□□□ -0.43
COL11A1-211ENST00000635193 ENGASEQ8NFI3 743 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 CCSER1Q9C0I3 900 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 IP6K2Q9UHH9 426 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 FAM205CA6NFA0 338 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 TDP2O95551 362 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 ANP32DO95626 131 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 SERPINB2P05120 415 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 PRDX5P30044 214 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 PAPOLAP51003 745 aaKnown RBP12.37□□□□□ -0.43
COL11A1-211ENST00000635193 CCDC15Q0P6D6 951 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 CC2D2BQ6DHV5 1058 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 DHX38Q92620 1227 aaKnown RBP12.37□□□□□ -0.43
COL11A1-211ENST00000635193 HPS3Q969F9 1004 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 PHF20Q9BVI0 1012 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 MOV10L1Q9BXT6 1211 aaKnown RBP12.37□□□□□ -0.43
COL11A1-211ENST00000635193 ADGRL3Q9HAR2 1447 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 CYP26B1Q9NR63 512 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 PHF2O75151 1096 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 RHOBTB3O94955 611 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 LONRF1Q17RB8 773 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 NCLNQ969V3 563 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 AGPAT1Q99943 283 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 SLC13A1Q9BZW2 595 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 C10orf88Q9H8K7 445 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 ZNF408Q9H9D4 720 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 ASNSD1Q9NWL6 643 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 HEY1Q9Y5J3 304 aa12.37□□□□□ -0.43
COL11A1-211ENST00000635193 IQGAP3Q86VI3 1631 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms