RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 PCDH10Q9P2E7 1040 aa8.85□□□□□ -0.99
CHD2-213ENST00000628118 A0A1B0GVL5 298 aa8.84□□□□□ -0.99
CHD2-213ENST00000628118 PVALEFA0A1B0GWK0 134 aa8.84□□□□□ -0.99
CHD2-213ENST00000628118 MYMKA6NI61 221 aa8.84□□□□□ -0.99
CHD2-213ENST00000628118 MGEA5O60502 916 aa8.84□□□□□ -0.99
CHD2-213ENST00000628118 CSDE1O75534 798 aaKnown RBP8.84□□□□□ -0.99
CHD2-213ENST00000628118 DGKIO75912 1065 aa8.84□□□□□ -0.99
CHD2-213ENST00000628118 ARF4P18085 180 aaPredicted RBP8.84□□□□□ -0.99
CHD2-213ENST00000628118 FGFR4P22455 802 aa8.84□□□□□ -0.99
CHD2-213ENST00000628118 FXR1P51114 621 aaKnown RBP eCLIP8.84□□□□□ -0.995e-6■■■□□ 17
CHD2-213ENST00000628118 DCAF4L1Q3SXM0 396 aa8.84□□□□□ -0.99
CHD2-213ENST00000628118 ZNF697Q5TEC3 545 aa8.84□□□□□ -0.99
CHD2-213ENST00000628118 SLC27A1Q6PCB7 646 aa8.84□□□□□ -0.99
CHD2-213ENST00000628118 ZPBP2Q6X784 338 aa8.84□□□□□ -0.99
CHD2-213ENST00000628118 MRPL10Q7Z7H8 261 aaKnown RBP8.84□□□□□ -0.99
CHD2-213ENST00000628118 ZNF598Q86UK7 904 aaKnown RBP8.84□□□□□ -0.99
CHD2-213ENST00000628118 ELOA2Q8IYF1 753 aaPredicted RBP8.84□□□□□ -0.99
CHD2-213ENST00000628118 ABI1Q8IZP0 508 aa8.84□□□□□ -0.99
CHD2-213ENST00000628118 FSIP1Q8NA03 581 aa8.84□□□□□ -0.99
CHD2-213ENST00000628118 TMEM161BQ8NDZ6 487 aa8.84□□□□□ -0.99
CHD2-213ENST00000628118 ZNF689Q96CS4 500 aaPredicted RBP8.84□□□□□ -0.99
CHD2-213ENST00000628118 TIGD1Q96MW7 591 aa8.84□□□□□ -0.99
CHD2-213ENST00000628118 MRPL9Q9BYD2 267 aaKnown RBP8.84□□□□□ -0.99
CHD2-213ENST00000628118 PANK2Q9BZ23 570 aa8.84□□□□□ -0.99
CHD2-213ENST00000628118 TRIM9Q9C026 710 aa8.84□□□□□ -0.99
CHD2-213ENST00000628118 TRIM6Q9C030 488 aaPredicted RBP8.84□□□□□ -0.99
CHD2-213ENST00000628118 TMEM117Q9H0C3 514 aa8.84□□□□□ -0.99
CHD2-213ENST00000628118 SLC28A3Q9HAS3 691 aa8.84□□□□□ -0.99
CHD2-213ENST00000628118 TNFSF13BQ9Y275 285 aa8.84□□□□□ -0.99
CHD2-213ENST00000628118 PTPRSQ13332 1948 aa8.84□□□□□ -1
CHD2-213ENST00000628118 ADGRA3Q8IWK6 1321 aa8.83□□□□□ -1
CHD2-213ENST00000628118 NPHP3-ACAD11A0A0J9YXS1 232 aa8.83□□□□□ -1
CHD2-213ENST00000628118 SFI1A8K8P3 1242 aa8.83□□□□□ -1
CHD2-213ENST00000628118 K7ENM7 598 aa8.83□□□□□ -1
CHD2-213ENST00000628118 SLC16A4O15374 487 aa8.83□□□□□ -1
CHD2-213ENST00000628118 ACTN4O43707 911 aaKnown RBP8.83□□□□□ -1
CHD2-213ENST00000628118 UPP2O95045 317 aa8.83□□□□□ -1
CHD2-213ENST00000628118 PIGRP01833 764 aa8.83□□□□□ -1
CHD2-213ENST00000628118 NDUFA8P51970 172 aa8.83□□□□□ -1
CHD2-213ENST00000628118 GTF2BQ00403 316 aa8.83□□□□□ -1
CHD2-213ENST00000628118 RAD51AP2Q09MP3 1159 aa8.83□□□□□ -1
CHD2-213ENST00000628118 KYAT1Q16773 422 aa8.83□□□□□ -1
CHD2-213ENST00000628118 TMEM132AQ24JP5 1023 aa8.83□□□□□ -1
CHD2-213ENST00000628118 HERC4Q5GLZ8 1057 aaPredicted RBP8.83□□□□□ -1
CHD2-213ENST00000628118 TMEM92Q6UXU6 159 aa8.83□□□□□ -1
CHD2-213ENST00000628118 UNC13DQ70J99 1090 aa8.83□□□□□ -1
CHD2-213ENST00000628118 DYMQ7RTS9 669 aa8.83□□□□□ -1
CHD2-213ENST00000628118 ZNF720Q7Z2F6 126 aa8.83□□□□□ -1
CHD2-213ENST00000628118 HAUS6Q7Z4H7 955 aa8.83□□□□□ -1
CHD2-213ENST00000628118 CCDC47Q96A33 483 aaKnown RBP8.83□□□□□ -1
CHD2-213ENST00000628118 GBP4Q96PP9 640 aa8.83□□□□□ -1
CHD2-213ENST00000628118 FIZ1Q96SL8 496 aa8.83□□□□□ -1
CHD2-213ENST00000628118 ZHX3Q9H4I2 956 aa8.83□□□□□ -1
CHD2-213ENST00000628118 RC3H2Q9HBD1 1191 aaKnown RBP8.83□□□□□ -1
CHD2-213ENST00000628118 GDPD2Q9HCC8 539 aa8.83□□□□□ -1
CHD2-213ENST00000628118 PANK4Q9NVE7 773 aa8.83□□□□□ -1
CHD2-213ENST00000628118 KANSL3Q9P2N6 904 aa8.83□□□□□ -1
CHD2-213ENST00000628118 SERTAD1Q9UHV2 236 aa8.83□□□□□ -1
CHD2-213ENST00000628118 HOOK1Q9UJC3 728 aaKnown RBP8.83□□□□□ -1
CHD2-213ENST00000628118 EXOC7Q9UPT5 735 aa8.83□□□□□ -1
CHD2-213ENST00000628118 GIT1Q9Y2X7 761 aa8.83□□□□□ -1
CHD2-213ENST00000628118 PCDHB2Q9Y5E7 798 aa8.83□□□□□ -1
CHD2-213ENST00000628118 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.83□□□□□ -1
CHD2-213ENST00000628118 UBE4BO95155 1302 aa8.82□□□□□ -1
CHD2-213ENST00000628118 GRXCR1A8MXD5 290 aa8.82□□□□□ -1
CHD2-213ENST00000628118 SOX1O00570 391 aaPredicted RBP8.82□□□□□ -1
CHD2-213ENST00000628118 INPPL1O15357 1258 aa8.82□□□□□ -1
CHD2-213ENST00000628118 TOM1L1O75674 476 aa8.82□□□□□ -1
CHD2-213ENST00000628118 ZNF202O95125 648 aa8.82□□□□□ -1
CHD2-213ENST00000628118 RB1P06400 928 aa8.82□□□□□ -1
CHD2-213ENST00000628118 ITGA4P13612 1032 aa8.82□□□□□ -1
CHD2-213ENST00000628118 IDEP14735 1019 aa8.82□□□□□ -1
CHD2-213ENST00000628118 RABGGTBP53611 331 aa8.82□□□□□ -1
CHD2-213ENST00000628118 ERVK-21P61565 698 aa8.82□□□□□ -1
CHD2-213ENST00000628118 UBE2HP62256 183 aa8.82□□□□□ -1
CHD2-213ENST00000628118 SNRPFP62306 86 aaKnown RBP8.82□□□□□ -1
CHD2-213ENST00000628118 ASIC1P78348 528 aa8.82□□□□□ -1
CHD2-213ENST00000628118 PLCB2Q00722 1185 aa8.82□□□□□ -1
CHD2-213ENST00000628118 POU5F1Q01860 360 aaKnown RBP8.82□□□□□ -1
CHD2-213ENST00000628118 FAM160A1Q05DH4 1040 aa8.82□□□□□ -1
CHD2-213ENST00000628118 COASYQ13057 564 aa8.82□□□□□ -1
CHD2-213ENST00000628118 PSMD2Q13200 908 aa8.82□□□□□ -1
CHD2-213ENST00000628118 BTG3Q14201 252 aaPredicted RBP8.82□□□□□ -1
CHD2-213ENST00000628118 HSP90AA2PQ14568 343 aaPredicted RBP8.82□□□□□ -1
CHD2-213ENST00000628118 POSTNQ15063 836 aa8.82□□□□□ -1
CHD2-213ENST00000628118 UBXN11Q5T124 520 aa8.82□□□□□ -1
CHD2-213ENST00000628118 ATF7IP2Q5U623 682 aa8.82□□□□□ -1
CHD2-213ENST00000628118 PPP2R2DQ66LE6 453 aa8.82□□□□□ -1
CHD2-213ENST00000628118 SLFN12LQ6IEE8 588 aa8.82□□□□□ -1
CHD2-213ENST00000628118 GLB1LQ6UWU2 654 aa8.82□□□□□ -1
CHD2-213ENST00000628118 KRBA2Q6ZNG9 492 aa8.82□□□□□ -1
CHD2-213ENST00000628118 SFR1Q86XK3 245 aa8.82□□□□□ -1
CHD2-213ENST00000628118 MAP4K3Q8IVH8 894 aa8.82□□□□□ -1
CHD2-213ENST00000628118 LRRC43Q8N309 656 aa8.82□□□□□ -1
CHD2-213ENST00000628118 FIBCD1Q8N539 461 aa8.82□□□□□ -1
CHD2-213ENST00000628118 CLP1Q92989 425 aaKnown RBP8.82□□□□□ -1
CHD2-213ENST00000628118 PAGE5Q96GU1 130 aa8.82□□□□□ -1
CHD2-213ENST00000628118 CPB2Q96IY4 423 aa8.82□□□□□ -1
CHD2-213ENST00000628118 CHAMP1Q96JM3 812 aa8.82□□□□□ -1
CHD2-213ENST00000628118 TGS1Q96RS0 853 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms