RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 A2ML1A8K2U0 1454 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 A0A1W2PQC6 194 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 TMEM247A6NEH6 219 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 ESRRBO95718 433 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 NMT1P30419 496 aaKnown RBP13.6□□□□□ -0.23
SCN8A-209ENST00000627620 SSTR3P32745 418 aaPredicted RBP13.6□□□□□ -0.23
SCN8A-209ENST00000627620 POU5F1BQ06416 359 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 ANKRD40Q6AI12 368 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 STOX1Q6ZVD7 989 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 ZBED8Q8IZ13 594 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 CCNYL1Q8N7R7 359 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 SP110Q9HB58 689 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 JPH1Q9HDC5 661 aaPredicted RBP13.6□□□□□ -0.23
SCN8A-209ENST00000627620 TUFT1Q9NNX1 390 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 CCDC195A0A1B0GUA6 201 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 COPB2P35606 906 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 TRIM28Q13263 835 aaKnown RBP13.6□□□□□ -0.23
SCN8A-209ENST00000627620 MFSD14CQ5VZR4 134 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 ITPRIPL1Q6GPH6 555 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 CDKL3Q8IVW4 592 aaPredicted RBP13.6□□□□□ -0.23
SCN8A-209ENST00000627620 RGL1Q9NZL6 768 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 NPHP3-ACAD11A0A0J9YXS1 232 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 ARHGDIAP52565 204 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 NOP14P78316 857 aaKnown RBP13.6□□□□□ -0.23
SCN8A-209ENST00000627620 MXD4Q14582 209 aaPredicted RBP13.6□□□□□ -0.23
SCN8A-209ENST00000627620 CCDC137Q6PK04 289 aaKnown RBP13.6□□□□□ -0.23
SCN8A-209ENST00000627620 TTC30AQ86WT1 665 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 RNF149Q8NC42 400 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 RFFLQ8WZ73 363 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 FAM96AQ9H5X1 160 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 MLXIPLQ9NP71 852 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 TET3O43151 1660 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 NNMTP40261 264 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 MTMR2Q13614 643 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 PDIA5Q14554 519 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 TSGA10IPQ3SY00 556 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 LMBRD2Q68DH5 695 aaPredicted RBP13.6□□□□□ -0.23
SCN8A-209ENST00000627620 SIK2Q9H0K1 926 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 PARVAQ9NVD7 372 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 L3MBTL1Q9Y468 752 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 TARBP1Q13395 1621 aaKnown RBP13.6□□□□□ -0.23
SCN8A-209ENST00000627620 ZCCHC11Q5TAX3 1644 aaKnown RBP13.6□□□□□ -0.23
SCN8A-209ENST00000627620 PDXKO00764 312 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 SPAG7O75391 227 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 EFNA5P52803 228 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 KCNB1Q14721 858 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 BEND6Q5SZJ8 279 aaPredicted RBP13.59□□□□□ -0.23
SCN8A-209ENST00000627620 SNF8Q96H20 258 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 BFARQ9NZS9 450 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 ZFP69BQ9UJL9 534 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 FBXO2Q9UK22 296 aaPredicted RBP13.59□□□□□ -0.23
SCN8A-209ENST00000627620 ADCY10Q96PN6 1610 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 NRKQ7Z2Y5 1582 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 HADHAP40939 763 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 STAT5BP51692 787 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 FASTKD5Q7L8L6 764 aaKnown RBP13.59□□□□□ -0.23
SCN8A-209ENST00000627620 SZRD1Q7Z422 152 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 RASSF3Q86WH2 238 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 TBC1D16Q8TBP0 767 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 C1orf54Q8WWF1 131 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 ULK4Q96C45 1275 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 PFASO15067 1338 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 E5RI56 91 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 ZNF560Q96MR9 790 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 SPON2Q9BUD6 331 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 FAM187AA6NFU0 413 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 H3BRJ5 948 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 CDH6P55285 790 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 EXOSC10Q01780 885 aaKnown RBP13.59□□□□□ -0.23
SCN8A-209ENST00000627620 IMPG1Q17R60 797 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 AGPAT1Q99943 283 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 DAGLAQ9Y4D2 1042 aa13.59□□□□□ -0.23
SCN8A-209ENST00000627620 ZBBXA8MT70 800 aa13.58□□□□□ -0.23
SCN8A-209ENST00000627620 CYP26A1O43174 497 aa13.58□□□□□ -0.23
SCN8A-209ENST00000627620 TXNP10599 105 aaKnown RBP13.58□□□□□ -0.23
SCN8A-209ENST00000627620 CPB1P15086 417 aa13.58□□□□□ -0.23
SCN8A-209ENST00000627620 KYAT1Q16773 422 aa13.58□□□□□ -0.23
SCN8A-209ENST00000627620 TTC30BQ8N4P2 665 aa13.58□□□□□ -0.23
SCN8A-209ENST00000627620 MYCBPQ99417 103 aaPredicted RBP13.58□□□□□ -0.23
SCN8A-209ENST00000627620 TAF1DQ9H5J8 278 aaPredicted RBP13.58□□□□□ -0.23
SCN8A-209ENST00000627620 MTMR4Q9NYA4 1195 aa13.58□□□□□ -0.23
SCN8A-209ENST00000627620 CRB1P82279 1406 aa13.58□□□□□ -0.23
SCN8A-209ENST00000627620 USP27XA6NNY8 438 aa13.58□□□□□ -0.24
SCN8A-209ENST00000627620 ANP32DO95626 131 aa13.58□□□□□ -0.24
SCN8A-209ENST00000627620 BRAFP15056 766 aa13.58□□□□□ -0.24
SCN8A-209ENST00000627620 CHRNA5P30532 468 aa13.58□□□□□ -0.24
SCN8A-209ENST00000627620 BTBD8Q5XKL5 378 aa13.58□□□□□ -0.24
SCN8A-209ENST00000627620 ADAM21Q9UKJ8 722 aa13.58□□□□□ -0.24
SCN8A-209ENST00000627620 CAPN11Q9UMQ6 739 aa13.58□□□□□ -0.24
SCN8A-209ENST00000627620 PRKCBP05771 671 aa13.58□□□□□ -0.24
SCN8A-209ENST00000627620 LCP1P13796 627 aa13.58□□□□□ -0.24
SCN8A-209ENST00000627620 HOXD10P28358 340 aa13.58□□□□□ -0.24
SCN8A-209ENST00000627620 PPP2R2AP63151 447 aa13.58□□□□□ -0.24
SCN8A-209ENST00000627620 RABL6Q3YEC7 729 aaPredicted RBP13.58□□□□□ -0.24
SCN8A-209ENST00000627620 KCNV1Q6PIU1 500 aa13.58□□□□□ -0.24
SCN8A-209ENST00000627620 NRBF2Q96F24 287 aa13.58□□□□□ -0.24
SCN8A-209ENST00000627620 SETSIPP0DME0 302 aa13.58□□□□□ -0.24
SCN8A-209ENST00000627620 TAP1Q03518 808 aa13.58□□□□□ -0.24
SCN8A-209ENST00000627620 SMAD1Q15797 465 aaKnown RBP13.58□□□□□ -0.24
SCN8A-209ENST00000627620 METTL16Q86W50 562 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms