RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 KCTD16Q68DU8 428 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 MAEAQ7L5Y9 396 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 CD101Q93033 1021 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 HOOK2Q96ED9 719 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 CLMNQ96JQ2 1002 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 CCDC43Q96MW1 224 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 CARD9Q9H257 536 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 AGO4Q9HCK5 861 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 COL20A1Q9P218 1284 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 FEZ2Q9UHY8 353 aaPredicted RBP7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 CEP350Q5VT06 3117 aa7.76□□□□□ -1.17
CTNNA1-244ENST00000627109 ZSWIM8A7E2V4 1837 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 PTPRFP10586 1907 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 SFI1A8K8P3 1242 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 FAM13AO94988 1023 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 GALCP54803 685 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 UBXN2AP68543 259 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 SPP2Q13103 211 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 ZC2HC1CQ53FD0 456 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 PHLDB3Q6NSJ2 640 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 FOXR1Q6PIV2 292 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 SLC17A8Q8NDX2 589 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 ARL8AQ96BM9 186 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 LXNQ9BS40 222 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 TMEM206Q9H813 350 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.75□□□□□ -1.172e-7■■■■■ 172.4
CTNNA1-244ENST00000627109 NOC2LQ9Y3T9 749 aaKnown RBP7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 PCDHA3Q9Y5H8 950 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 IGSF9BQ9UPX0 1349 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 ZBTB39O15060 712 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 CLIC2O15247 247 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 GAS7O60861 476 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 PAEPP09466 180 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 ALAS1P13196 640 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 CORO7P57737 925 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 PTENP60484 403 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 PPP2R5EQ16537 467 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 KCTD19Q17RG1 926 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 ZNF568Q3ZCX4 644 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 ODF2Q5BJF6 829 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 VPS36Q86VN1 386 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 DNAAF5Q86Y56 855 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 PIGOQ8TEQ8 1089 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 ATP8B4Q8TF62 1192 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 FBXL18Q96ME1 805 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 KRT12Q99456 494 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 ZNF577Q9BSK1 485 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 TMBIM4Q9HC24 238 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 EPB41L5Q9HCM4 733 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 LCMT1Q9UIC8 334 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 NFU1Q9UMS0 254 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 ZSCAN5CA6NGD5 496 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 IPO5O00410 1097 aaKnown RBP7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 P4HBP07237 508 aaKnown RBP7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 USP8P40818 1118 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 ATP1A2P50993 1020 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 GUCY2DQ02846 1103 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 ITGB3BPQ13352 177 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 DRAP1Q14919 205 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 CYP1B1Q16678 543 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 GJB7Q6PEY0 223 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 INTS8Q75QN2 995 aaKnown RBP7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 C4orf19Q8IY42 314 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 MYCT1Q8N699 235 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 RDH13Q8NBN7 331 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 C3orf20Q8ND61 904 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 RDM1Q8NG50 284 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 ZNF341Q9BYN7 854 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 KIAA1522Q9P206 1035 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 NOCTQ9UK39 431 aaKnown RBP7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 DNAJC12Q9UKB3 198 aa7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 RRP15Q9Y3B9 282 aaKnown RBP7.75□□□□□ -1.17
CTNNA1-244ENST00000627109 VGLL3A8MV65 326 aa7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 HMGB1P1B2RPK0 211 aaPredicted RBP7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 MYO1CO00159 1063 aa7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 KCNK3O14649 394 aa7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 CEP104O60308 925 aa7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 HIP1RO75146 1068 aa7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 PPFIA2O75334 1257 aa7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 STBD1O95210 358 aa7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 CFBP00751 764 aa7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 CCDC172P0C7W6 258 aa7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 PLS3P13797 630 aa7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 VCAM1P19320 739 aa7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 CLDN10P78369 228 aa7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 LPAR1Q92633 364 aa7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 TEPSINQ96N21 525 aa7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 NTPCRQ9BSD7 190 aaKnown RBP7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 KIAA1683Q9H0B3 1180 aa7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 IKZF4Q9H2S9 585 aa7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 PDLIM7Q9NR12 457 aa7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 ZDHHC18Q9NUE0 388 aa7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 COG5Q9UP83 839 aa7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 GOLGA6L10A6NI86 522 aa7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 WDR46O15213 610 aaKnown RBP7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 CTNNA2P26232 953 aa7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 RARRES1P49788 294 aa7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 MRPS9P82933 396 aaKnown RBP7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 XRRA1Q6P2D8 792 aa7.74□□□□□ -1.17
CTNNA1-244ENST00000627109 GADL1Q6ZQY3 521 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms