RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 DRP2Q13474 957 aa21.29■■□□□ 1
CHRNA4-209ENST00000627000 FAM160B1Q5W0V3 765 aa21.29■■□□□ 1
CHRNA4-209ENST00000627000 CC2D1AQ6P1N0 951 aaPredicted RBP21.29■■□□□ 1
CHRNA4-209ENST00000627000 GPD1LQ8N335 351 aa21.29■■□□□ 1
CHRNA4-209ENST00000627000 AFAP1L1Q8TED9 768 aa21.29■■□□□ 1
CHRNA4-209ENST00000627000 COPS5Q92905 334 aa21.29■■□□□ 1
CHRNA4-209ENST00000627000 ELMO3Q96BJ8 720 aa21.29■■□□□ 1
CHRNA4-209ENST00000627000 FAM213AQ9BRX8 229 aa21.29■■□□□ 1
CHRNA4-209ENST00000627000 SMARCAL1Q9NZC9 954 aa21.29■■□□□ 1
CHRNA4-209ENST00000627000 EHD2Q9NZN4 543 aa21.29■■□□□ 1
CHRNA4-209ENST00000627000 HYOU1Q9Y4L1 999 aa21.29■■□□□ 1
CHRNA4-209ENST00000627000 PCDHGC5Q9Y5F6 944 aa21.29■■□□□ 1
CHRNA4-209ENST00000627000 PRLRP16471 622 aa21.29■■□□□ 1
CHRNA4-209ENST00000627000 GARTP22102 1010 aa21.29■■□□□ 1
CHRNA4-209ENST00000627000 LIG4P49917 911 aa21.29■■□□□ 1
CHRNA4-209ENST00000627000 GPR20Q99678 358 aa21.29■■□□□ 1
CHRNA4-209ENST00000627000 MROH8Q9H579 483 aa21.29■■□□□ 1
CHRNA4-209ENST00000627000 NRBP2Q9NSY0 501 aa21.29■■□□□ 1
CHRNA4-209ENST00000627000 SIP14410 1827 aa21.28■■□□□ 1
CHRNA4-209ENST00000627000 BTNL10A8MVZ5 291 aa21.28■■□□□ 1
CHRNA4-209ENST00000627000 TMCO5BA8MYB1 307 aa21.28■■□□□ 1
CHRNA4-209ENST00000627000 DLATP10515 647 aaKnown RBP21.28■■□□□ 1
CHRNA4-209ENST00000627000 RFX1P22670 979 aa21.28■■□□□ 1
CHRNA4-209ENST00000627000 NAMPTP43490 491 aa21.28■■□□□ 1
CHRNA4-209ENST00000627000 DNA2P51530 1060 aa21.28■■□□□ 1
CHRNA4-209ENST00000627000 DEPTORQ8TB45 409 aa21.28■■□□□ 1
CHRNA4-209ENST00000627000 MPHOSPH6Q99547 160 aaKnown RBP21.28■■□□□ 1
CHRNA4-209ENST00000627000 PDGFCQ9NRA1 345 aa21.28■■□□□ 1
CHRNA4-209ENST00000627000 PACSIN2Q9UNF0 486 aaPredicted RBP21.28■■□□□ 1
CHRNA4-209ENST00000627000 H0YCG3 227 aa21.27■■□□□ 1
CHRNA4-209ENST00000627000 PMM2O15305 246 aa21.27■■□□□ 1
CHRNA4-209ENST00000627000 EDN1P05305 212 aa21.27■■□□□ 1
CHRNA4-209ENST00000627000 TUBB4BP68371 445 aa21.27■■□□□ 1
CHRNA4-209ENST00000627000 C2orf54Q08AI8 447 aa21.27■■□□□ 1
CHRNA4-209ENST00000627000 KIF22Q14807 665 aa21.27■■□□□ 1
CHRNA4-209ENST00000627000 CELF3Q5SZQ8 465 aaKnown RBP21.27■■□□□ 1
CHRNA4-209ENST00000627000 KRT39Q6A163 491 aa21.27■■□□□ 1
CHRNA4-209ENST00000627000 PNMA8AQ86V59 439 aaPredicted RBP21.27■■□□□ 1
CHRNA4-209ENST00000627000 PALB2Q86YC2 1186 aa21.27■■□□□ 1
CHRNA4-209ENST00000627000 TMC2Q8TDI7 906 aa21.27■■□□□ 1
CHRNA4-209ENST00000627000 ZBTB45Q96K62 511 aaPredicted RBP21.27■■□□□ 1
CHRNA4-209ENST00000627000 HAPLN2Q9GZV7 340 aa21.27■■□□□ 1
CHRNA4-209ENST00000627000 GOLPH3Q9H4A6 298 aa21.27■■□□□ 1
CHRNA4-209ENST00000627000 DAAM1Q9Y4D1 1078 aa21.27■■□□□ 1
CHRNA4-209ENST00000627000 H2AFZP0C0S5 128 aa21.27■■□□□ 1
CHRNA4-209ENST00000627000 TCP1P17987 556 aaKnown RBP21.27■■□□□ 1
CHRNA4-209ENST00000627000 STRN3Q13033 797 aa21.27■■□□□ 1
CHRNA4-209ENST00000627000 H2AFVQ71UI9 128 aa21.27■■□□□ 1
CHRNA4-209ENST00000627000 TAS1R2Q8TE23 839 aa21.27■■□□□ 1
CHRNA4-209ENST00000627000 SLC20A1Q8WUM9 679 aa21.27■■□□□ 1
CHRNA4-209ENST00000627000 GLG1Q92896 1179 aa21.27■■□□□ 1
CHRNA4-209ENST00000627000 KREMEN1Q96MU8 473 aa21.27■■□□□ 1
CHRNA4-209ENST00000627000 TMEM8AQ9HCN3 771 aa21.27■■□□□ 1
CHRNA4-209ENST00000627000 RAB21Q9UL25 225 aa21.27■■□□□ 1
CHRNA4-209ENST00000627000 RFC5P40937 340 aa21.26■□□□□ 0.99
CHRNA4-209ENST00000627000 NOP2P46087 812 aaKnown RBP21.26■□□□□ 0.99
CHRNA4-209ENST00000627000 GALCP54803 685 aa21.26■□□□□ 0.99
CHRNA4-209ENST00000627000 WNT7BP56706 349 aa21.26■□□□□ 0.99
CHRNA4-209ENST00000627000 CAPSQ13938 189 aa21.26■□□□□ 0.99
CHRNA4-209ENST00000627000 CCDC62Q6P9F0 684 aa21.26■□□□□ 0.99
CHRNA4-209ENST00000627000 AZI2Q9H6S1 392 aa21.26■□□□□ 0.99
CHRNA4-209ENST00000627000 OGFRQ9NZT2 677 aa21.26■□□□□ 0.99
CHRNA4-209ENST00000627000 ZC3H4Q9UPT8 1303 aaKnown RBP21.26■□□□□ 0.99
CHRNA4-209ENST00000627000 K7ERI5 159 aa21.26■□□□□ 0.99
CHRNA4-209ENST00000627000 VSNL1P62760 191 aa21.26■□□□□ 0.99
CHRNA4-209ENST00000627000 MEI1Q5TIA1 1274 aa21.26■□□□□ 0.99
CHRNA4-209ENST00000627000 SV2AQ7L0J3 742 aa21.26■□□□□ 0.99
CHRNA4-209ENST00000627000 PPM1KQ8N3J5 372 aa21.26■□□□□ 0.99
CHRNA4-209ENST00000627000 TARS2Q9BW92 718 aaKnown RBP21.26■□□□□ 0.99
CHRNA4-209ENST00000627000 SEPT11Q9NVA2 429 aaKnown RBP21.26■□□□□ 0.99
CHRNA4-209ENST00000627000 TAS2R14Q9NYV8 317 aa21.26■□□□□ 0.99
CHRNA4-209ENST00000627000 COQ4Q9Y3A0 265 aa21.26■□□□□ 0.99
CHRNA4-209ENST00000627000 NOP56O00567 594 aaKnown RBP21.25■□□□□ 0.99
CHRNA4-209ENST00000627000 MAFO75444 373 aaPredicted RBP21.25■□□□□ 0.99
CHRNA4-209ENST00000627000 CCDC172P0C7W6 258 aa21.25■□□□□ 0.99
CHRNA4-209ENST00000627000 TNFAIP3P21580 790 aa21.25■□□□□ 0.99
CHRNA4-209ENST00000627000 USP8P40818 1118 aa21.25■□□□□ 0.99
CHRNA4-209ENST00000627000 NLRP11P59045 1033 aaKnown RBP21.25■□□□□ 0.99
CHRNA4-209ENST00000627000 LMBRD2Q68DH5 695 aaPredicted RBP21.25■□□□□ 0.99
CHRNA4-209ENST00000627000 DHX37Q8IY37 1157 aaKnown RBP21.25■□□□□ 0.99
CHRNA4-209ENST00000627000 MS4A4AQ96JQ5 239 aa21.25■□□□□ 0.99
CHRNA4-209ENST00000627000 SPATA33Q96N06 139 aa21.25■□□□□ 0.99
CHRNA4-209ENST00000627000 PRDM4Q9UKN5 801 aa21.25■□□□□ 0.99
CHRNA4-209ENST00000627000 CCDC151A5D8V7 595 aa21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 ZNF233A6NK53 670 aa21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 PDHXO00330 501 aa21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 EXTL3O43909 919 aa21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 ACOT2P49753 483 aa21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 BRD3Q15059 726 aa21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 PTPROQ16827 1216 aa21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 KCNV1Q6PIU1 500 aa21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 SHCBP1Q8NEM2 672 aa21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 MORC4Q8TE76 937 aa21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 ZNF516Q92618 1163 aa21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 MS4A14Q96JA4 679 aa21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 RPGRIP1Q96KN7 1286 aa21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 AGPAT1Q99943 283 aa21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 FAM53CQ9NYF3 392 aa21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 KCNG1Q9UIX4 513 aa21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 PNMA3Q9UL41 463 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms