RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 NCBP1Q09161 790 aaKnown RBP9.34□□□□□ -0.91
SGMS1-211ENST00000626236 NFX1Q12986 1120 aaKnown RBP9.34□□□□□ -0.91
SGMS1-211ENST00000626236 PCBP1Q15365 356 aaKnown RBP eCLIP9.34□□□□□ -0.91
SGMS1-211ENST00000626236 AMHR2Q16671 573 aa9.34□□□□□ -0.91
SGMS1-211ENST00000626236 FAM187BQ17R55 369 aa9.34□□□□□ -0.91
SGMS1-211ENST00000626236 BMT2Q1RMZ1 405 aa9.34□□□□□ -0.91
SGMS1-211ENST00000626236 DPCR1Q3MIW9 517 aa9.34□□□□□ -0.91
SGMS1-211ENST00000626236 COBLL1Q53SF7 1204 aa9.34□□□□□ -0.91
SGMS1-211ENST00000626236 KLHL10Q6JEL2 608 aa9.34□□□□□ -0.91
SGMS1-211ENST00000626236 DEFB128Q7Z7B8 93 aa9.34□□□□□ -0.91
SGMS1-211ENST00000626236 MAP4K3Q8IVH8 894 aa9.34□□□□□ -0.91
SGMS1-211ENST00000626236 GUF1Q8N442 669 aaKnown RBP9.34□□□□□ -0.91
SGMS1-211ENST00000626236 USP38Q8NB14 1042 aa9.34□□□□□ -0.91
SGMS1-211ENST00000626236 CPB2Q96IY4 423 aa9.34□□□□□ -0.91
SGMS1-211ENST00000626236 PRIMPOLQ96LW4 560 aa9.34□□□□□ -0.91
SGMS1-211ENST00000626236 TARS2Q9BW92 718 aaKnown RBP9.34□□□□□ -0.91
SGMS1-211ENST00000626236 MRPL4Q9BYD3 311 aaKnown RBP9.34□□□□□ -0.91
SGMS1-211ENST00000626236 IFIH1Q9BYX4 1025 aaKnown RBP9.34□□□□□ -0.91
SGMS1-211ENST00000626236 IKZF4Q9H2S9 585 aa9.34□□□□□ -0.91
SGMS1-211ENST00000626236 TMEM206Q9H813 350 aa9.34□□□□□ -0.91
SGMS1-211ENST00000626236 AGO3Q9H9G7 860 aaKnown RBP9.34□□□□□ -0.91
SGMS1-211ENST00000626236 ANO10Q9NW15 660 aa9.34□□□□□ -0.91
SGMS1-211ENST00000626236 PADI3Q9ULW8 664 aa9.34□□□□□ -0.91
SGMS1-211ENST00000626236 ST3GAL5Q9UNP4 418 aa9.34□□□□□ -0.91
SGMS1-211ENST00000626236 EXOC7Q9UPT5 735 aa9.34□□□□□ -0.91
SGMS1-211ENST00000626236 CTNND2Q9UQB3 1225 aa9.34□□□□□ -0.91
SGMS1-211ENST00000626236 PIN4Q9Y237 131 aaKnown RBP9.34□□□□□ -0.91
SGMS1-211ENST00000626236 SQORQ9Y6N5 450 aa9.34□□□□□ -0.91
SGMS1-211ENST00000626236 MICAL3Q7RTP6 2002 aa9.33□□□□□ -0.92
SGMS1-211ENST00000626236 PSMA7O14818 248 aa9.33□□□□□ -0.92
SGMS1-211ENST00000626236 PARNO95453 639 aaKnown RBP9.33□□□□□ -0.92
SGMS1-211ENST00000626236 CSF2RAP15509 400 aa9.33□□□□□ -0.92
SGMS1-211ENST00000626236 ARF4P18085 180 aaPredicted RBP9.33□□□□□ -0.92
SGMS1-211ENST00000626236 PPP1R2P41236 205 aa9.33□□□□□ -0.92
SGMS1-211ENST00000626236 MATR3P43243 847 aaKnown RBP eCLIP9.33□□□□□ -0.922e-6■■■■■ 27.3
SGMS1-211ENST00000626236 GPNMBQ14956 572 aa9.33□□□□□ -0.92
SGMS1-211ENST00000626236 KNOP1Q1ED39 458 aaKnown RBP9.33□□□□□ -0.92
SGMS1-211ENST00000626236 ANO6Q4KMQ2 910 aa9.33□□□□□ -0.92
SGMS1-211ENST00000626236 ATF7IP2Q5U623 682 aa9.33□□□□□ -0.92
SGMS1-211ENST00000626236 MFSD5Q6N075 450 aa9.33□□□□□ -0.92
SGMS1-211ENST00000626236 CDR2LQ86X02 465 aaPredicted RBP9.33□□□□□ -0.92
SGMS1-211ENST00000626236 ADSSL1Q8N142 457 aa9.33□□□□□ -0.92
SGMS1-211ENST00000626236 TMEM199Q8N511 208 aa9.33□□□□□ -0.92
SGMS1-211ENST00000626236 MLKLQ8NB16 471 aa9.33□□□□□ -0.92
SGMS1-211ENST00000626236 NELFBQ8WX92 580 aa9.33□□□□□ -0.92
SGMS1-211ENST00000626236 KCNN1Q92952 543 aa9.33□□□□□ -0.92
SGMS1-211ENST00000626236 DHTKD1Q96HY7 919 aaPredicted RBP9.33□□□□□ -0.92
SGMS1-211ENST00000626236 ACO2Q99798 780 aaKnown RBP9.33□□□□□ -0.92
SGMS1-211ENST00000626236 GBP3Q9H0R5 595 aa9.33□□□□□ -0.92
SGMS1-211ENST00000626236 DNAJC25Q9H1X3 360 aa9.33□□□□□ -0.92
SGMS1-211ENST00000626236 ERVK-5Q9HDB9 667 aa9.33□□□□□ -0.92
SGMS1-211ENST00000626236 AGPAT5Q9NUQ2 364 aa9.33□□□□□ -0.92
SGMS1-211ENST00000626236 ANKFY1Q9P2R3 1169 aa9.33□□□□□ -0.92
SGMS1-211ENST00000626236 DACH1Q9UI36 760 aa9.33□□□□□ -0.92
SGMS1-211ENST00000626236 ZMYND8Q9ULU4 1186 aaPredicted RBP9.33□□□□□ -0.92
SGMS1-211ENST00000626236 C2orf72A6NCS6 295 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 TRIM49BA6NDI0 452 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 TISP43B9A030 160 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 ANKRD63C9JTQ0 380 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 N4BP3O15049 544 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 TGFB1I1O43294 461 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 CALUO43852 315 aaPredicted RBP9.32□□□□□ -0.92
SGMS1-211ENST00000626236 PIGRP01833 764 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 CXCL10P02778 98 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 HARSP12081 509 aaKnown RBP9.32□□□□□ -0.92
SGMS1-211ENST00000626236 ZSCAN20P17040 1043 aaPredicted RBP9.32□□□□□ -0.92
SGMS1-211ENST00000626236 CCNE1P24864 410 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 AXLP30530 894 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 PAK1Q13153 545 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 PLEKHG4Q58EX7 1191 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 SLC39A4Q6P5W5 647 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 NOTUMQ6P988 496 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 SLC27A1Q6PCB7 646 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 ZPBP2Q6X784 338 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 C11orf57Q6ZUT1 292 aaPredicted RBP9.32□□□□□ -0.92
SGMS1-211ENST00000626236 ZBTB33Q86T24 672 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 SEPT8Q92599 483 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 BADQ92934 168 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 P2RX5Q93086 422 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 TCHPQ9BT92 498 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 FUCA2Q9BTY2 467 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 KCTD10Q9H3F6 313 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 SEMA6BQ9H3T3 888 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 PDZD7Q9H5P4 517 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 TYW1Q9NV66 732 aaKnown RBP9.32□□□□□ -0.92
SGMS1-211ENST00000626236 TNFSF13BQ9Y275 285 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 TET1Q8NFU7 2136 aa9.32□□□□□ -0.92
SGMS1-211ENST00000626236 TNRC18O15417 2968 aaPredicted RBP9.31□□□□□ -0.92
SGMS1-211ENST00000626236 A0A1B0GUA9 196 aa9.31□□□□□ -0.92
SGMS1-211ENST00000626236 PDXKO00764 312 aa9.31□□□□□ -0.92
SGMS1-211ENST00000626236 CLIC2O15247 247 aa9.31□□□□□ -0.92
SGMS1-211ENST00000626236 CLDN3O15551 220 aa9.31□□□□□ -0.92
SGMS1-211ENST00000626236 MGEA5O60502 916 aa9.31□□□□□ -0.92
SGMS1-211ENST00000626236 TOM1L1O75674 476 aa9.31□□□□□ -0.92
SGMS1-211ENST00000626236 NPTXRO95502 500 aa9.31□□□□□ -0.92
SGMS1-211ENST00000626236 IBSPP21815 317 aaPredicted RBP9.31□□□□□ -0.92
SGMS1-211ENST00000626236 HOXA11P31270 313 aaPredicted RBP9.31□□□□□ -0.92
SGMS1-211ENST00000626236 PMS1P54277 932 aaKnown RBP9.31□□□□□ -0.92
SGMS1-211ENST00000626236 STX17P56962 302 aa9.31□□□□□ -0.92
SGMS1-211ENST00000626236 FPGSQ05932 587 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms