RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 TUFT1Q9NNX1 390 aa21.31■■□□□ 1
ATG4B-226ENST00000625810 STK39Q9UEW8 545 aa21.31■■□□□ 1
ATG4B-226ENST00000625810 IPPQ9Y573 584 aa21.31■■□□□ 1
ATG4B-226ENST00000625810 IRAK3Q9Y616 596 aa21.31■■□□□ 1
ATG4B-226ENST00000625810 GLRA2P23416 452 aa21.3■■□□□ 1
ATG4B-226ENST00000625810 HMGN5P82970 282 aaKnown RBP21.3■■□□□ 1
ATG4B-226ENST00000625810 MBTD1Q05BQ5 628 aa21.3■■□□□ 1
ATG4B-226ENST00000625810 ITIH3Q06033 890 aa21.3■■□□□ 1
ATG4B-226ENST00000625810 SIGLEC14Q08ET2 396 aa21.3■■□□□ 1
ATG4B-226ENST00000625810 HACE1Q8IYU2 909 aa21.3■■□□□ 1
ATG4B-226ENST00000625810 ERMNQ8TAM6 284 aa21.3■■□□□ 1
ATG4B-226ENST00000625810 APOL6Q9BWW8 343 aa21.3■■□□□ 1
ATG4B-226ENST00000625810 CSRNP2Q9H175 543 aa21.3■■□□□ 1
ATG4B-226ENST00000625810 FOXP1Q9H334 677 aaPredicted RBP21.3■■□□□ 1
ATG4B-226ENST00000625810 POMKQ9H5K3 350 aa21.3■■□□□ 1
ATG4B-226ENST00000625810 ZDBF2Q9HCK1 2354 aa21.29■■□□□ 1
ATG4B-226ENST00000625810 NRP1O14786 923 aa21.29■■□□□ 1
ATG4B-226ENST00000625810 SSBP05455 408 aaKnown RBP eCLIP21.29■■□□□ 1
ATG4B-226ENST00000625810 SPATA31C1P0DKV0 1188 aa21.29■■□□□ 1
ATG4B-226ENST00000625810 RARS2Q5T160 578 aaKnown RBP21.29■■□□□ 1
ATG4B-226ENST00000625810 CATSPER3Q86XQ3 398 aa21.29■■□□□ 1
ATG4B-226ENST00000625810 ASIC4Q96FT7 647 aa21.29■■□□□ 1
ATG4B-226ENST00000625810 NECTIN4Q96NY8 510 aa21.29■■□□□ 1
ATG4B-226ENST00000625810 NACC1Q96RE7 527 aa21.29■■□□□ 1
ATG4B-226ENST00000625810 GAD1Q99259 594 aa21.29■■□□□ 1
ATG4B-226ENST00000625810 RNF39Q9H2S5 420 aa21.29■■□□□ 1
ATG4B-226ENST00000625810 TSHZ2Q9NRE2 1034 aa21.29■■□□□ 1
ATG4B-226ENST00000625810 DZANK1Q9NVP4 752 aa21.29■■□□□ 1
ATG4B-226ENST00000625810 HES2Q9Y543 173 aa21.29■■□□□ 1
ATG4B-226ENST00000625810 LRRIQ4A6NIV6 560 aa21.28■■□□□ 1
ATG4B-226ENST00000625810 MED24O75448 989 aa21.28■■□□□ 1
ATG4B-226ENST00000625810 OR52Z1P0C646 297 aa21.28■■□□□ 1
ATG4B-226ENST00000625810 EPCAMP16422 314 aa21.28■■□□□ 1
ATG4B-226ENST00000625810 ARF4P18085 180 aaPredicted RBP21.28■■□□□ 1
ATG4B-226ENST00000625810 OR1G1P47890 313 aa21.28■■□□□ 1
ATG4B-226ENST00000625810 ORC2Q13416 577 aaPredicted RBP21.28■■□□□ 1
ATG4B-226ENST00000625810 ZBTB33Q86T24 672 aa21.28■■□□□ 1
ATG4B-226ENST00000625810 PPFIBP1Q86W92 1011 aa21.28■■□□□ 1
ATG4B-226ENST00000625810 C12orf76Q8N812 135 aaPredicted RBP21.28■■□□□ 1
ATG4B-226ENST00000625810 SLC22A17Q8WUG5 538 aa21.28■■□□□ 1
ATG4B-226ENST00000625810 RIPOR3Q96MK2 946 aa21.28■■□□□ 1
ATG4B-226ENST00000625810 POLR3CQ9BUI4 534 aaPredicted RBP21.28■■□□□ 1
ATG4B-226ENST00000625810 EMILIN2Q9BXX0 1053 aa21.28■■□□□ 1
ATG4B-226ENST00000625810 NFKBIZQ9BYH8 718 aa21.28■■□□□ 1
ATG4B-226ENST00000625810 SH2B1Q9NRF2 756 aaPredicted RBP21.28■■□□□ 1
ATG4B-226ENST00000625810 PRG3Q9Y2Y8 225 aaPredicted RBP21.28■■□□□ 1
ATG4B-226ENST00000625810 NR2E1Q9Y466 385 aa21.28■■□□□ 1
ATG4B-226ENST00000625810 ARL5CA6NH57 179 aa21.27■■□□□ 1
ATG4B-226ENST00000625810 SPDYE4A6NLX3 237 aa21.27■■□□□ 1
ATG4B-226ENST00000625810 WEE2P0C1S8 567 aa21.27■■□□□ 1
ATG4B-226ENST00000625810 KLRC2P26717 231 aa21.27■■□□□ 1
ATG4B-226ENST00000625810 MLH1P40692 756 aa21.27■■□□□ 1
ATG4B-226ENST00000625810 MTHFRP42898 656 aa21.27■■□□□ 1
ATG4B-226ENST00000625810 RBM25P49756 843 aaKnown RBP21.27■■□□□ 1
ATG4B-226ENST00000625810 PTPN14Q15678 1187 aa21.27■■□□□ 1
ATG4B-226ENST00000625810 AMHR2Q16671 573 aa21.27■■□□□ 1
ATG4B-226ENST00000625810 IER5LQ5T953 404 aa21.27■■□□□ 1
ATG4B-226ENST00000625810 SUGP1Q8IWZ8 645 aaKnown RBP21.27■■□□□ 1
ATG4B-226ENST00000625810 FBXL6Q8N531 539 aa21.27■■□□□ 1
ATG4B-226ENST00000625810 MCPH1Q8NEM0 835 aa21.27■■□□□ 1
ATG4B-226ENST00000625810 PRSS33Q8NF86 280 aa21.27■■□□□ 1
ATG4B-226ENST00000625810 FBXO18Q8NFZ0 1043 aa21.27■■□□□ 1
ATG4B-226ENST00000625810 GPRC5CQ9NQ84 441 aa21.27■■□□□ 1
ATG4B-226ENST00000625810 MRPL17Q9NRX2 175 aaKnown RBP21.27■■□□□ 1
ATG4B-226ENST00000625810 DBR1Q9UK59 544 aaKnown RBP21.27■■□□□ 1
ATG4B-226ENST00000625810 NOL7Q9UMY1 257 aaKnown RBP21.27■■□□□ 1
ATG4B-226ENST00000625810 KMT2EQ8IZD2 1858 aa21.26■□□□□ 0.99
ATG4B-226ENST00000625810 C2CD4DB7Z1M9 353 aa21.26■□□□□ 0.99
ATG4B-226ENST00000625810 NR1I2O75469 434 aa21.26■□□□□ 0.99
ATG4B-226ENST00000625810 MRE11P49959 708 aa21.26■□□□□ 0.99
ATG4B-226ENST00000625810 TTC38Q5R3I4 469 aa21.26■□□□□ 0.99
ATG4B-226ENST00000625810 ATAT1Q5SQI0 421 aa21.26■□□□□ 0.99
ATG4B-226ENST00000625810 KANK3Q6NY19 840 aa21.26■□□□□ 0.99
ATG4B-226ENST00000625810 CABP7Q86V35 215 aa21.26■□□□□ 0.99
ATG4B-226ENST00000625810 CDR2LQ86X02 465 aaPredicted RBP21.26■□□□□ 0.99
ATG4B-226ENST00000625810 ZBTB8OSQ8IWT0 167 aa21.26■□□□□ 0.99
ATG4B-226ENST00000625810 COLGALT2Q8IYK4 626 aa21.26■□□□□ 0.99
ATG4B-226ENST00000625810 KLHL5Q96PQ7 755 aa21.26■□□□□ 0.99
ATG4B-226ENST00000625810 GIT1Q9Y2X7 761 aa21.26■□□□□ 0.99
ATG4B-226ENST00000625810 TDRD15B5MCY1 1934 aaKnown RBP21.25■□□□□ 0.99
ATG4B-226ENST00000625810 ARHGEF35A5YM69 484 aa21.25■□□□□ 0.99
ATG4B-226ENST00000625810 B4GALT5O43286 388 aa21.25■□□□□ 0.99
ATG4B-226ENST00000625810 NPTXRO95502 500 aa21.25■□□□□ 0.99
ATG4B-226ENST00000625810 URODP06132 367 aa21.25■□□□□ 0.99
ATG4B-226ENST00000625810 RPA1P27694 616 aa21.25■□□□□ 0.99
ATG4B-226ENST00000625810 SCNN1GP51170 649 aa21.25■□□□□ 0.99
ATG4B-226ENST00000625810 KIAA1841Q6NSI8 718 aa21.25■□□□□ 0.99
ATG4B-226ENST00000625810 SLC27A1Q6PCB7 646 aa21.25■□□□□ 0.99
ATG4B-226ENST00000625810 POTEGQ6S5H5 508 aa21.25■□□□□ 0.99
ATG4B-226ENST00000625810 NOSTRINQ8IVI9 506 aa21.25■□□□□ 0.99
ATG4B-226ENST00000625810 FEZF2Q8TBJ5 459 aa21.25■□□□□ 0.99
ATG4B-226ENST00000625810 ZFP42Q96MM3 310 aa21.25■□□□□ 0.99
ATG4B-226ENST00000625810 NXF3Q9H4D5 531 aaKnown RBP21.25■□□□□ 0.99
ATG4B-226ENST00000625810 PRMT7Q9NVM4 692 aaPredicted RBP21.25■□□□□ 0.99
ATG4B-226ENST00000625810 MIOSQ9NXC5 875 aa21.25■□□□□ 0.99
ATG4B-226ENST00000625810 PARP2Q9UGN5 583 aa21.25■□□□□ 0.99
ATG4B-226ENST00000625810 SSX2IPQ9Y2D8 614 aa21.25■□□□□ 0.99
ATG4B-226ENST00000625810 C2CD2LO14523 706 aa21.24■□□□□ 0.99
ATG4B-226ENST00000625810 INPPL1O15357 1258 aa21.24■□□□□ 0.99
ATG4B-226ENST00000625810 SOD2P04179 222 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms