RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 YME1L1Q96TA2 773 aa7.18□□□□□ -1.26
TCF4-249ENST00000625716 FTHL17Q9BXU8 183 aa7.18□□□□□ -1.26
TCF4-249ENST00000625716 CELF4Q9BZC1 486 aaKnown RBP7.18□□□□□ -1.26
TCF4-249ENST00000625716 CERS4Q9HA82 394 aa7.18□□□□□ -1.26
TCF4-249ENST00000625716 GJB4Q9NTQ9 266 aa7.18□□□□□ -1.26
TCF4-249ENST00000625716 KIF3AQ9Y496 699 aa7.18□□□□□ -1.26
TCF4-249ENST00000625716 SQORQ9Y6N5 450 aa7.18□□□□□ -1.26
TCF4-249ENST00000625716 DOCK5Q9H7D0 1870 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 BTBD18B2RXH4 712 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 GPR182O15218 404 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 SLC37A4O43826 429 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 EDIL3O43854 480 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 RPS6KA5O75582 802 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 ATP2B1P20020 1258 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 CD52P31358 61 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 NOS2P35228 1153 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 PCBP4P57723 403 aaKnown RBP7.17□□□□□ -1.26
TCF4-249ENST00000625716 PSMC5P62195 406 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 CDC42EP1Q00587 391 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 GUCY1B3Q02153 619 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 PRKCEQ02156 737 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 MGAT3Q09327 533 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 TBC1D8BQ0IIM8 1120 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 LPIN1Q14693 890 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 TCTN1Q2MV58 587 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 XKR3Q5GH77 459 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 EFCAB12Q6NXP0 572 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 FAM43BQ6ZT52 329 aaPredicted RBP7.17□□□□□ -1.26
TCF4-249ENST00000625716 CHSY3Q70JA7 882 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 KIAA0319LQ8IZA0 1049 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 MICALL1Q8N3F8 863 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 ETNPPLQ8TBG4 499 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 ARNTL2Q8WYA1 636 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 TOP1MTQ969P6 601 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 TGS1Q96RS0 853 aaKnown RBP7.17□□□□□ -1.26
TCF4-249ENST00000625716 MDFIQ99750 246 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 SUGCTQ9HAC7 445 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 LRFN2Q9ULH4 789 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 AKT3Q9Y243 479 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 IGSF9BQ9UPX0 1349 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 TANC1Q9C0D5 1861 aa7.17□□□□□ -1.26
TCF4-249ENST00000625716 DNAH12Q6ZR08 3092 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 DENND3A2RUS2 1198 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 ENPP3O14638 875 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 NEMFO60524 1076 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 C22orf31O95567 290 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 P4HBP07237 508 aaKnown RBP7.16□□□□□ -1.26
TCF4-249ENST00000625716 STAG3L1P0CL83 205 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 IBSPP21815 317 aaPredicted RBP7.16□□□□□ -1.26
TCF4-249ENST00000625716 ADH6P28332 368 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 QARSP47897 775 aaKnown RBP7.16□□□□□ -1.26
TCF4-249ENST00000625716 CRYBB1P53674 252 aaPredicted RBP7.16□□□□□ -1.26
TCF4-249ENST00000625716 CLDN10P78369 228 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 TAP1Q03518 808 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 PPP2R5CQ13362 524 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 EPHA7Q15375 998 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 CCDC85BQ15834 202 aaPredicted RBP7.16□□□□□ -1.26
TCF4-249ENST00000625716 CALCRLQ16602 461 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 KIZQ2M2Z5 673 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 MTERF2Q49AM1 385 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 NCAPH2Q6IBW4 605 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 OTUD6AQ7L8S5 288 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 SLC9A9Q8IVB4 645 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 EXOC8Q8IYI6 725 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 CCDC43Q96MW1 224 aaKnown RBP7.16□□□□□ -1.26
TCF4-249ENST00000625716 PPP1R16BQ96T49 567 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 JPH2Q9BR39 696 aaPredicted RBP7.16□□□□□ -1.26
TCF4-249ENST00000625716 OSBPL7Q9BZF2 842 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 KCNMB3Q9NPA1 279 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 AVENQ9NQS1 362 aaPredicted RBP7.16□□□□□ -1.26
TCF4-249ENST00000625716 MTUS1Q9ULD2 1270 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 PADI3Q9ULW8 664 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 NOL7Q9UMY1 257 aaKnown RBP7.16□□□□□ -1.26
TCF4-249ENST00000625716 PCDHA12Q9UN75 941 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 KDM3AQ9Y4C1 1321 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 SCN5AQ14524 2016 aa7.16□□□□□ -1.26
TCF4-249ENST00000625716 TRIP12Q14669 1992 aaPredicted RBP7.15□□□□□ -1.26
TCF4-249ENST00000625716 RANBP2P49792 3224 aaKnown RBP7.15□□□□□ -1.26
TCF4-249ENST00000625716 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.15□□□□□ -1.26
TCF4-249ENST00000625716 LCHNA4D1U4 455 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 LINC01553A4QN01 128 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 ZBTB42B2RXF5 422 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 RFXAPO00287 272 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 GNB5O14775 395 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 ZNF862O60290 1169 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 DKK1O94907 266 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 VTNP04004 478 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 ZSCAN20P17040 1043 aaPredicted RBP7.15□□□□□ -1.26
TCF4-249ENST00000625716 TXKP42681 527 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 MCM2P49736 904 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 CLCN3P51790 818 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 NLRP11P59045 1033 aaKnown RBP7.15□□□□□ -1.26
TCF4-249ENST00000625716 ERVK-21P61565 698 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 HTRA4P83105 476 aaPredicted RBP7.15□□□□□ -1.26
TCF4-249ENST00000625716 UGCGQ16739 394 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 TMEM266Q2M3C6 531 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 EARS2Q5JPH6 523 aaKnown RBP7.15□□□□□ -1.26
TCF4-249ENST00000625716 ZNF468Q5VIY5 522 aaPredicted RBP7.15□□□□□ -1.26
TCF4-249ENST00000625716 ALYREFQ86V81 257 aaKnown RBP7.15□□□□□ -1.26
TCF4-249ENST00000625716 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms