RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 FAM86B1E9PN63 330 aa15.68■□□□□ 0.1
SNX1-214ENST00000625244 C1RP00736 705 aa15.68■□□□□ 0.1
SNX1-214ENST00000625244 FAM86B2P0C5J1 330 aa15.68■□□□□ 0.1
SNX1-214ENST00000625244 RAB27AP51159 221 aa15.68■□□□□ 0.1
SNX1-214ENST00000625244 ANTXR2P58335 489 aa15.68■□□□□ 0.1
SNX1-214ENST00000625244 SART3Q15020 963 aaKnown RBP15.68■□□□□ 0.1
SNX1-214ENST00000625244 LRSAM1Q6UWE0 723 aa15.68■□□□□ 0.1
SNX1-214ENST00000625244 MAMSTRQ6ZN01 415 aa15.68■□□□□ 0.1
SNX1-214ENST00000625244 HEATR3Q7Z4Q2 680 aa15.68■□□□□ 0.1
SNX1-214ENST00000625244 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.68■□□□□ 0.1
SNX1-214ENST00000625244 ITFG1Q8TB96 612 aa15.68■□□□□ 0.1
SNX1-214ENST00000625244 PGBD4Q96DM1 585 aa15.68■□□□□ 0.1
SNX1-214ENST00000625244 ANO3Q9BYT9 981 aa15.68■□□□□ 0.1
SNX1-214ENST00000625244 CHST7Q9NS84 486 aa15.68■□□□□ 0.1
SNX1-214ENST00000625244 RXFP3Q9NSD7 469 aa15.68■□□□□ 0.1
SNX1-214ENST00000625244 MRPS17Q9Y2R5 130 aaKnown RBP15.68■□□□□ 0.1
SNX1-214ENST00000625244 RALGAPA1Q6GYQ0 2036 aa15.68■□□□□ 0.1
SNX1-214ENST00000625244 MTCL1Q9Y4B5 1905 aaKnown RBP15.67■□□□□ 0.1
SNX1-214ENST00000625244 A0A087WZ62 844 aa15.67■□□□□ 0.1
SNX1-214ENST00000625244 IPO5O00410 1097 aaKnown RBP15.67■□□□□ 0.1
SNX1-214ENST00000625244 ZNF862O60290 1169 aa15.67■□□□□ 0.1
SNX1-214ENST00000625244 FOXD2O60548 495 aaPredicted RBP15.67■□□□□ 0.1
SNX1-214ENST00000625244 DDAH1O94760 285 aa15.67■□□□□ 0.1
SNX1-214ENST00000625244 PSAPP07602 524 aa15.67■□□□□ 0.1
SNX1-214ENST00000625244 CYP21A2P08686 494 aa15.67■□□□□ 0.1
SNX1-214ENST00000625244 RPL17P18621 184 aaKnown RBP15.67■□□□□ 0.1
SNX1-214ENST00000625244 SFPQP23246 707 aaKnown RBP eCLIP15.67■□□□□ 0.1
SNX1-214ENST00000625244 ZNF76P36508 570 aa15.67■□□□□ 0.1
SNX1-214ENST00000625244 OR1G1P47890 313 aa15.67■□□□□ 0.1
SNX1-214ENST00000625244 AASDHQ4L235 1098 aaPredicted RBP15.67■□□□□ 0.1
SNX1-214ENST00000625244 ZNF746Q6NUN9 644 aaPredicted RBP15.67■□□□□ 0.1
SNX1-214ENST00000625244 NIPA1Q7RTP0 329 aa15.67■□□□□ 0.1
SNX1-214ENST00000625244 PLA2G4DQ86XP0 818 aa15.67■□□□□ 0.1
SNX1-214ENST00000625244 COLGALT2Q8IYK4 626 aa15.67■□□□□ 0.1
SNX1-214ENST00000625244 CCDC82Q8N4S0 544 aa15.67■□□□□ 0.1
SNX1-214ENST00000625244 FAM167AQ96KS9 214 aa15.67■□□□□ 0.1
SNX1-214ENST00000625244 FDXACB1Q9BRP7 624 aaPredicted RBP15.67■□□□□ 0.1
SNX1-214ENST00000625244 PLA2G2FQ9BZM2 168 aa15.67■□□□□ 0.1
SNX1-214ENST00000625244 RSAD1Q9HA92 442 aa15.67■□□□□ 0.1
SNX1-214ENST00000625244 KANSL3Q9P2N6 904 aa15.67■□□□□ 0.1
SNX1-214ENST00000625244 NDRG2Q9UN36 371 aaKnown RBP15.67■□□□□ 0.1
SNX1-214ENST00000625244 PCDHA10Q9Y5I2 948 aa15.67■□□□□ 0.1
SNX1-214ENST00000625244 MAST4O15021 2626 aa15.67■□□□□ 0.1
SNX1-214ENST00000625244 MYH9P35579 1960 aaKnown RBP15.67■□□□□ 0.1
SNX1-214ENST00000625244 IGLV3-22A0A075B6J6 115 aa15.66■□□□□ 0.1
SNX1-214ENST00000625244 KCNK5O95279 499 aa15.66■□□□□ 0.1
SNX1-214ENST00000625244 OATP04181 439 aa15.66■□□□□ 0.1
SNX1-214ENST00000625244 RXRAP19793 462 aa15.66■□□□□ 0.1
SNX1-214ENST00000625244 SREBF1P36956 1147 aa15.66■□□□□ 0.1
SNX1-214ENST00000625244 GNAQP50148 359 aa15.66■□□□□ 0.1
SNX1-214ENST00000625244 SATB1Q01826 763 aa15.66■□□□□ 0.1
SNX1-214ENST00000625244 RING1Q06587 406 aa15.66■□□□□ 0.1
SNX1-214ENST00000625244 PPP2R5DQ14738 602 aa15.66■□□□□ 0.1
SNX1-214ENST00000625244 SF3A2Q15428 464 aaKnown RBP15.66■□□□□ 0.1
SNX1-214ENST00000625244 TYW1BQ6NUM6 668 aa15.66■□□□□ 0.1
SNX1-214ENST00000625244 MRPL10Q7Z7H8 261 aaKnown RBP15.66■□□□□ 0.1
SNX1-214ENST00000625244 TMEM121BQ9BXQ6 578 aaPredicted RBP15.66■□□□□ 0.1
SNX1-214ENST00000625244 RIC8AQ9NPQ8 531 aa15.66■□□□□ 0.1
SNX1-214ENST00000625244 HELZ2Q9BYK8 2649 aaKnown RBP15.66■□□□□ 0.1
SNX1-214ENST00000625244 SRRM3A6NNA2 597 aaPredicted RBP15.65■□□□□ 0.1
SNX1-214ENST00000625244 CHURC1-FNTBB4DL54 471 aa15.65■□□□□ 0.1
SNX1-214ENST00000625244 FOSP01100 380 aaPredicted RBP15.65■□□□□ 0.1
SNX1-214ENST00000625244 FNTBP49356 437 aa15.65■□□□□ 0.1
SNX1-214ENST00000625244 CCR3P51677 355 aa15.65■□□□□ 0.1
SNX1-214ENST00000625244 CCDC6Q16204 474 aa15.65■□□□□ 0.1
SNX1-214ENST00000625244 CATSPER4Q7RTX7 472 aa15.65■□□□□ 0.1
SNX1-214ENST00000625244 RALYLQ86SE5 291 aaKnown RBP15.65■□□□□ 0.1
SNX1-214ENST00000625244 SMAP1Q8IYB5 467 aaPredicted RBP15.65■□□□□ 0.1
SNX1-214ENST00000625244 FAM160A2Q8N612 972 aaPredicted RBP15.65■□□□□ 0.1
SNX1-214ENST00000625244 MBOAT7Q96N66 472 aa15.65■□□□□ 0.1
SNX1-214ENST00000625244 ZNF577Q9BSK1 485 aa15.65■□□□□ 0.1
SNX1-214ENST00000625244 GPR62Q9BZJ7 368 aa15.65■□□□□ 0.1
SNX1-214ENST00000625244 NRBP2Q9NSY0 501 aa15.65■□□□□ 0.1
SNX1-214ENST00000625244 FNIP2Q9P278 1114 aa15.65■□□□□ 0.1
SNX1-214ENST00000625244 LHX6Q9UPM6 363 aa15.65■□□□□ 0.1
SNX1-214ENST00000625244 CNTNAP2Q9UHC6 1331 aa15.65■□□□□ 0.1
SNX1-214ENST00000625244 IGSF10Q6WRI0 2623 aa15.64■□□□□ 0.1
SNX1-214ENST00000625244 E7EWF7 191 aa15.64■□□□□ 0.09
SNX1-214ENST00000625244 CCL16O15467 120 aa15.64■□□□□ 0.09
SNX1-214ENST00000625244 PRKCEQ02156 737 aa15.64■□□□□ 0.09
SNX1-214ENST00000625244 STPG1Q5TH74 334 aa15.64■□□□□ 0.09
SNX1-214ENST00000625244 WWC2Q6AWC2 1192 aa15.64■□□□□ 0.09
SNX1-214ENST00000625244 NPAS3Q8IXF0 933 aa15.64■□□□□ 0.09
SNX1-214ENST00000625244 NCOA7Q8NI08 942 aa15.64■□□□□ 0.09
SNX1-214ENST00000625244 LSM14BQ9BX40 385 aaKnown RBP15.64■□□□□ 0.09
SNX1-214ENST00000625244 LNPKQ9C0E8 428 aa15.64■□□□□ 0.09
SNX1-214ENST00000625244 LMAN1LQ9HAT1 526 aa15.64■□□□□ 0.09
SNX1-214ENST00000625244 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.64■□□□□ 0.09
SNX1-214ENST00000625244 TBC1D22BQ9NU19 505 aa15.64■□□□□ 0.09
SNX1-214ENST00000625244 FBXW11Q9UKB1 542 aa15.64■□□□□ 0.09
SNX1-214ENST00000625244 SAMM50Q9Y512 469 aa15.64■□□□□ 0.09
SNX1-214ENST00000625244 HIP1O00291 1037 aa15.63■□□□□ 0.09
SNX1-214ENST00000625244 SPINK2P20155 84 aa15.63■□□□□ 0.09
SNX1-214ENST00000625244 CXCL12P48061 93 aa15.63■□□□□ 0.09
SNX1-214ENST00000625244 CDC42EP1Q00587 391 aa15.63■□□□□ 0.09
SNX1-214ENST00000625244 GAS6Q14393 721 aa15.63■□□□□ 0.09
SNX1-214ENST00000625244 TARBP2Q15633 366 aaKnown RBP15.63■□□□□ 0.09
SNX1-214ENST00000625244 UGCGQ16739 394 aa15.63■□□□□ 0.09
SNX1-214ENST00000625244 UBXN11Q5T124 520 aa15.63■□□□□ 0.09
SNX1-214ENST00000625244 PSAPL1Q6NUJ1 521 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms