RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 DDX53Q86TM3 631 aaKnown RBP13.73□□□□□ -0.21
LINC00963-217ENST00000624009 HSCBQ8IWL3 235 aa13.73□□□□□ -0.21
LINC00963-217ENST00000624009 SPIRE2Q8WWL2 714 aa13.73□□□□□ -0.21
LINC00963-217ENST00000624009 BSNDQ8WZ55 320 aa13.73□□□□□ -0.21
LINC00963-217ENST00000624009 LPPQ93052 612 aa13.73□□□□□ -0.21
LINC00963-217ENST00000624009 CALML4Q96GE6 196 aa13.73□□□□□ -0.21
LINC00963-217ENST00000624009 TMEM169Q96HH4 297 aa13.73□□□□□ -0.21
LINC00963-217ENST00000624009 PNMA5Q96PV4 448 aa13.73□□□□□ -0.21
LINC00963-217ENST00000624009 ADPGKQ9BRR6 497 aa13.73□□□□□ -0.21
LINC00963-217ENST00000624009 CCSER1Q9C0I3 900 aa13.73□□□□□ -0.21
LINC00963-217ENST00000624009 NRDE2Q9H7Z3 1164 aa13.73□□□□□ -0.21
LINC00963-217ENST00000624009 ARHGAP28Q9P2N2 729 aa13.73□□□□□ -0.21
LINC00963-217ENST00000624009 HCSTQ9UBK5 93 aa13.73□□□□□ -0.21
LINC00963-217ENST00000624009 MTMR6Q9Y217 621 aa13.73□□□□□ -0.21
LINC00963-217ENST00000624009 MTCL1Q9Y4B5 1905 aaKnown RBP13.72□□□□□ -0.21
LINC00963-217ENST00000624009 ARL5CA6NH57 179 aa13.72□□□□□ -0.21
LINC00963-217ENST00000624009 MEIS3P2A8K0S8 358 aa13.72□□□□□ -0.21
LINC00963-217ENST00000624009 H0YCG3 227 aa13.72□□□□□ -0.21
LINC00963-217ENST00000624009 B4GALT5O43286 388 aa13.72□□□□□ -0.21
LINC00963-217ENST00000624009 HIP1RO75146 1068 aa13.72□□□□□ -0.21
LINC00963-217ENST00000624009 ZC3H11AO75152 810 aaKnown RBP eCLIP13.72□□□□□ -0.21
LINC00963-217ENST00000624009 PRKCBP05771 671 aa13.72□□□□□ -0.21
LINC00963-217ENST00000624009 GALTP07902 379 aa13.72□□□□□ -0.21
LINC00963-217ENST00000624009 KCNA5P22460 613 aa13.72□□□□□ -0.21
LINC00963-217ENST00000624009 LTBRP36941 435 aa13.72□□□□□ -0.21
LINC00963-217ENST00000624009 KCNQ1P51787 676 aa13.72□□□□□ -0.21
LINC00963-217ENST00000624009 SLC12A3P55017 1021 aa13.72□□□□□ -0.21
LINC00963-217ENST00000624009 DSC1Q08554 894 aa13.72□□□□□ -0.21
LINC00963-217ENST00000624009 MAPK7Q13164 816 aa13.72□□□□□ -0.21
LINC00963-217ENST00000624009 PTPAQ15257 358 aa13.72□□□□□ -0.21
LINC00963-217ENST00000624009 TMEM184AQ6ZMB5 413 aa13.72□□□□□ -0.21
LINC00963-217ENST00000624009 MAEAQ7L5Y9 396 aa13.72□□□□□ -0.21
LINC00963-217ENST00000624009 KCNK18Q7Z418 384 aa13.72□□□□□ -0.21
LINC00963-217ENST00000624009 CABP7Q86V35 215 aa13.72□□□□□ -0.21
LINC00963-217ENST00000624009 DAW1Q8N136 415 aa13.72□□□□□ -0.21
LINC00963-217ENST00000624009 IGSF21Q96ID5 467 aa13.72□□□□□ -0.21
LINC00963-217ENST00000624009 CPB2Q96IY4 423 aa13.72□□□□□ -0.21
LINC00963-217ENST00000624009 UHRF1Q96T88 793 aaPredicted RBP13.72□□□□□ -0.21
LINC00963-217ENST00000624009 EIF2AQ9BY44 585 aaKnown RBP13.72□□□□□ -0.21
LINC00963-217ENST00000624009 CLDND1Q9NY35 253 aa13.72□□□□□ -0.21
LINC00963-217ENST00000624009 ODF2LQ9ULJ1 636 aa13.72□□□□□ -0.21
LINC00963-217ENST00000624009 SRPRBQ9Y5M8 271 aaKnown RBP13.72□□□□□ -0.21
LINC00963-217ENST00000624009 GRXCR2A6NFK2 248 aa13.71□□□□□ -0.21
LINC00963-217ENST00000624009 K7ERI5 159 aa13.71□□□□□ -0.21
LINC00963-217ENST00000624009 ALDH2P05091 517 aa13.71□□□□□ -0.21
LINC00963-217ENST00000624009 PLA2G4BP0C869 781 aa13.71□□□□□ -0.21
LINC00963-217ENST00000624009 SRGAP2BP0DMP2 458 aa13.71□□□□□ -0.21
LINC00963-217ENST00000624009 ABCD1P33897 745 aa13.71□□□□□ -0.21
LINC00963-217ENST00000624009 IRS1P35568 1242 aa13.71□□□□□ -0.21
LINC00963-217ENST00000624009 NPTX2P47972 431 aa13.71□□□□□ -0.21
LINC00963-217ENST00000624009 SMTNP53814 917 aa13.71□□□□□ -0.21
LINC00963-217ENST00000624009 ERVFC1P60507 584 aa13.71□□□□□ -0.21
LINC00963-217ENST00000624009 COASYQ13057 564 aa13.71□□□□□ -0.21
LINC00963-217ENST00000624009 SMC1AQ14683 1233 aaKnown RBP13.71□□□□□ -0.21
LINC00963-217ENST00000624009 DUSP6Q16828 381 aa13.71□□□□□ -0.21
LINC00963-217ENST00000624009 GPR65Q8IYL9 337 aa13.71□□□□□ -0.21
LINC00963-217ENST00000624009 MRPL43Q8N983 215 aaKnown RBP13.71□□□□□ -0.21
LINC00963-217ENST00000624009 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.71□□□□□ -0.21
LINC00963-217ENST00000624009 MICAL1Q8TDZ2 1067 aa13.71□□□□□ -0.21
LINC00963-217ENST00000624009 FAM193BQ96PV7 902 aaPredicted RBP13.71□□□□□ -0.21
LINC00963-217ENST00000624009 TCF25Q9BQ70 676 aa13.71□□□□□ -0.21
LINC00963-217ENST00000624009 RUSC1Q9BVN2 902 aa13.71□□□□□ -0.21
LINC00963-217ENST00000624009 PDZD7Q9H5P4 517 aa13.71□□□□□ -0.21
LINC00963-217ENST00000624009 TLE6Q9H808 572 aa13.71□□□□□ -0.21
LINC00963-217ENST00000624009 LARSQ9P2J5 1176 aaKnown RBP13.71□□□□□ -0.21
LINC00963-217ENST00000624009 PRKAG3Q9UGI9 489 aa13.71□□□□□ -0.21
LINC00963-217ENST00000624009 TNFSF13BQ9Y275 285 aa13.71□□□□□ -0.21
LINC00963-217ENST00000624009 INPP5FQ9Y2H2 1132 aa13.71□□□□□ -0.21
LINC00963-217ENST00000624009 PDCD11Q14690 1871 aaKnown RBP13.71□□□□□ -0.21
LINC00963-217ENST00000624009 TNFRSF10AO00220 468 aa13.7□□□□□ -0.22
LINC00963-217ENST00000624009 NR1I2O75469 434 aa13.7□□□□□ -0.22
LINC00963-217ENST00000624009 PLS3P13797 630 aa13.7□□□□□ -0.22
LINC00963-217ENST00000624009 NASPP49321 788 aaPredicted RBP13.7□□□□□ -0.22
LINC00963-217ENST00000624009 GRIK3Q13003 919 aa13.7□□□□□ -0.22
LINC00963-217ENST00000624009 KCNC3Q14003 757 aa13.7□□□□□ -0.22
LINC00963-217ENST00000624009 SLC39A14Q15043 492 aa13.7□□□□□ -0.22
LINC00963-217ENST00000624009 PTCRAQ6ISU1 281 aaPredicted RBP13.7□□□□□ -0.22
LINC00963-217ENST00000624009 COLGALT2Q8IYK4 626 aa13.7□□□□□ -0.22
LINC00963-217ENST00000624009 GSTCDQ8NEC7 633 aa13.7□□□□□ -0.22
LINC00963-217ENST00000624009 MSLNLQ96KJ4 702 aa13.7□□□□□ -0.22
LINC00963-217ENST00000624009 GAD1Q99259 594 aa13.7□□□□□ -0.22
LINC00963-217ENST00000624009 MRPL4Q9BYD3 311 aaKnown RBP13.7□□□□□ -0.22
LINC00963-217ENST00000624009 ZBP1Q9H171 429 aa13.7□□□□□ -0.22
LINC00963-217ENST00000624009 NXF3Q9H4D5 531 aaKnown RBP13.7□□□□□ -0.22
LINC00963-217ENST00000624009 ENTPD7Q9NQZ7 604 aa13.7□□□□□ -0.22
LINC00963-217ENST00000624009 STK17AQ9UEE5 414 aa13.7□□□□□ -0.22
LINC00963-217ENST00000624009 NPTXRO95502 500 aa13.69□□□□□ -0.22
LINC00963-217ENST00000624009 BRD1O95696 1058 aa13.69□□□□□ -0.22
LINC00963-217ENST00000624009 EFEMP2O95967 443 aa13.69□□□□□ -0.22
LINC00963-217ENST00000624009 C1RP00736 705 aa13.69□□□□□ -0.22
LINC00963-217ENST00000624009 CTSAP10619 480 aa13.69□□□□□ -0.22
LINC00963-217ENST00000624009 MLH1P40692 756 aa13.69□□□□□ -0.22
LINC00963-217ENST00000624009 NRIP1P48552 1158 aa13.69□□□□□ -0.22
LINC00963-217ENST00000624009 SLC11A1P49279 550 aa13.69□□□□□ -0.22
LINC00963-217ENST00000624009 ZNF131P52739 623 aa13.69□□□□□ -0.22
LINC00963-217ENST00000624009 PEX3P56589 373 aa13.69□□□□□ -0.22
LINC00963-217ENST00000624009 SMAD4Q13485 552 aaKnown RBP13.69□□□□□ -0.22
LINC00963-217ENST00000624009 ATF7IP2Q5U623 682 aa13.69□□□□□ -0.22
LINC00963-217ENST00000624009 ATL3Q6DD88 541 aa13.69□□□□□ -0.22
LINC00963-217ENST00000624009 TMC7Q7Z402 723 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms