RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 NOTCH4Q99466 2003 aa16.44■□□□□ 0.22
SNX12-206ENST00000622259 GREB1Q4ZG55 1949 aa16.44■□□□□ 0.22
SNX12-206ENST00000622259 CHURC1-FNTBB4DL54 471 aa16.43■□□□□ 0.22
SNX12-206ENST00000622259 ZNF862O60290 1169 aa16.43■□□□□ 0.22
SNX12-206ENST00000622259 TOP3BO95985 862 aaKnown RBP16.43■□□□□ 0.22
SNX12-206ENST00000622259 FNTBP49356 437 aa16.43■□□□□ 0.22
SNX12-206ENST00000622259 ANTXR2P58335 489 aa16.43■□□□□ 0.22
SNX12-206ENST00000622259 SATB1Q01826 763 aa16.43■□□□□ 0.22
SNX12-206ENST00000622259 POTEHQ6S545 545 aa16.43■□□□□ 0.22
SNX12-206ENST00000622259 URGCPQ8TCY9 931 aa16.43■□□□□ 0.22
SNX12-206ENST00000622259 CHST7Q9NS84 486 aa16.43■□□□□ 0.22
SNX12-206ENST00000622259 CEP131Q9UPN4 1083 aa16.43■□□□□ 0.22
SNX12-206ENST00000622259 WASF3Q9UPY6 502 aa16.43■□□□□ 0.22
SNX12-206ENST00000622259 WDR81Q562E7 1941 aa16.43■□□□□ 0.22
SNX12-206ENST00000622259 LAMA1P25391 3075 aa16.42■□□□□ 0.22
SNX12-206ENST00000622259 A0A087WZ62 844 aa16.42■□□□□ 0.22
SNX12-206ENST00000622259 ERICH2A1L162 156 aa16.42■□□□□ 0.22
SNX12-206ENST00000622259 FAM86B1E9PN63 330 aa16.42■□□□□ 0.22
SNX12-206ENST00000622259 FAM86B2P0C5J1 330 aa16.42■□□□□ 0.22
SNX12-206ENST00000622259 SKIP12755 728 aa16.42■□□□□ 0.22
SNX12-206ENST00000622259 SMARCA1P28370 1054 aa16.42■□□□□ 0.22
SNX12-206ENST00000622259 HOXC13P31276 330 aa16.42■□□□□ 0.22
SNX12-206ENST00000622259 OR1G1P47890 313 aa16.42■□□□□ 0.22
SNX12-206ENST00000622259 GAS6Q14393 721 aa16.42■□□□□ 0.22
SNX12-206ENST00000622259 TYW1BQ6NUM6 668 aa16.42■□□□□ 0.22
SNX12-206ENST00000622259 MAMSTRQ6ZN01 415 aa16.42■□□□□ 0.22
SNX12-206ENST00000622259 COLGALT2Q8IYK4 626 aa16.42■□□□□ 0.22
SNX12-206ENST00000622259 FAM160A2Q8N612 972 aaPredicted RBP16.42■□□□□ 0.22
SNX12-206ENST00000622259 IGDCC4Q8TDY8 1250 aa16.42■□□□□ 0.22
SNX12-206ENST00000622259 MBOAT7Q96N66 472 aa16.42■□□□□ 0.22
SNX12-206ENST00000622259 FAM193BQ96PV7 902 aaPredicted RBP16.42■□□□□ 0.22
SNX12-206ENST00000622259 FDXACB1Q9BRP7 624 aaPredicted RBP16.42■□□□□ 0.22
SNX12-206ENST00000622259 ANO3Q9BYT9 981 aa16.42■□□□□ 0.22
SNX12-206ENST00000622259 GCOM2Q9BZD3 368 aaPredicted RBP16.42■□□□□ 0.22
SNX12-206ENST00000622259 PCDHB2Q9Y5E7 798 aa16.42■□□□□ 0.22
SNX12-206ENST00000622259 ASH1LQ9NR48 2969 aaKnown RBP16.41■□□□□ 0.22
SNX12-206ENST00000622259 STPG1Q5TH74 334 aa16.41■□□□□ 0.22
SNX12-206ENST00000622259 PSAPL1Q6NUJ1 521 aa16.41■□□□□ 0.22
SNX12-206ENST00000622259 PLA2G4DQ86XP0 818 aa16.41■□□□□ 0.22
SNX12-206ENST00000622259 ZNF654Q8IZM8 581 aa16.41■□□□□ 0.22
SNX12-206ENST00000622259 ZNF710Q8N1W2 664 aa16.41■□□□□ 0.22
SNX12-206ENST00000622259 CTCFLQ8NI51 663 aaPredicted RBP16.41■□□□□ 0.22
SNX12-206ENST00000622259 LSM14BQ9BX40 385 aaKnown RBP16.41■□□□□ 0.22
SNX12-206ENST00000622259 RSAD1Q9HA92 442 aa16.41■□□□□ 0.22
SNX12-206ENST00000622259 ITPR1Q14643 2758 aa16.4■□□□□ 0.22
SNX12-206ENST00000622259 TAF4O00268 1085 aa16.4■□□□□ 0.22
SNX12-206ENST00000622259 GIPC1O14908 333 aa16.4■□□□□ 0.22
SNX12-206ENST00000622259 RXRAP19793 462 aa16.4■□□□□ 0.22
SNX12-206ENST00000622259 CCR3P51677 355 aa16.4■□□□□ 0.22
SNX12-206ENST00000622259 TRDNQ13061 729 aa16.4■□□□□ 0.22
SNX12-206ENST00000622259 MRPL10Q7Z7H8 261 aaKnown RBP16.4■□□□□ 0.22
SNX12-206ENST00000622259 NPAS3Q8IXF0 933 aa16.4■□□□□ 0.22
SNX12-206ENST00000622259 PGBD4Q96DM1 585 aa16.4■□□□□ 0.22
SNX12-206ENST00000622259 MAP3K14Q99558 947 aa16.4■□□□□ 0.22
SNX12-206ENST00000622259 GPR62Q9BZJ7 368 aa16.4■□□□□ 0.22
SNX12-206ENST00000622259 LMAN1LQ9HAT1 526 aa16.4■□□□□ 0.22
SNX12-206ENST00000622259 DIAPH3Q9NSV4 1193 aa16.4■□□□□ 0.22
SNX12-206ENST00000622259 MRPS17Q9Y2R5 130 aaKnown RBP16.4■□□□□ 0.22
SNX12-206ENST00000622259 IGLV3-22A0A075B6J6 115 aa16.39■□□□□ 0.21
SNX12-206ENST00000622259 IPO5O00410 1097 aaKnown RBP16.39■□□□□ 0.21
SNX12-206ENST00000622259 AXIN1O15169 862 aa16.39■□□□□ 0.21
SNX12-206ENST00000622259 CCL16O15467 120 aa16.39■□□□□ 0.21
SNX12-206ENST00000622259 FOXD2O60548 495 aaPredicted RBP16.39■□□□□ 0.21
SNX12-206ENST00000622259 C1RP00736 705 aa16.39■□□□□ 0.21
SNX12-206ENST00000622259 OATP04181 439 aa16.39■□□□□ 0.21
SNX12-206ENST00000622259 CYP21A2P08686 494 aa16.39■□□□□ 0.21
SNX12-206ENST00000622259 SFPQP23246 707 aaKnown RBP eCLIP16.39■□□□□ 0.21
SNX12-206ENST00000622259 RAB27AP51159 221 aa16.39■□□□□ 0.21
SNX12-206ENST00000622259 FOXC1Q12948 553 aa16.39■□□□□ 0.21
SNX12-206ENST00000622259 UGCGQ16739 394 aa16.39■□□□□ 0.21
SNX12-206ENST00000622259 UBXN11Q5T124 520 aa16.39■□□□□ 0.21
SNX12-206ENST00000622259 ZNF746Q6NUN9 644 aaPredicted RBP16.39■□□□□ 0.21
SNX12-206ENST00000622259 NIPA1Q7RTP0 329 aa16.39■□□□□ 0.21
SNX12-206ENST00000622259 HEATR3Q7Z4Q2 680 aa16.39■□□□□ 0.21
SNX12-206ENST00000622259 CCDC82Q8N4S0 544 aa16.39■□□□□ 0.21
SNX12-206ENST00000622259 ING5Q8WYH8 240 aa16.39■□□□□ 0.21
SNX12-206ENST00000622259 GATA6Q92908 595 aa16.39■□□□□ 0.21
SNX12-206ENST00000622259 ARRDC1-AS1Q9H2J1 176 aa16.39■□□□□ 0.21
SNX12-206ENST00000622259 HCFC1R1Q9NWW0 138 aa16.39■□□□□ 0.21
SNX12-206ENST00000622259 MIOSQ9NXC5 875 aa16.39■□□□□ 0.21
SNX12-206ENST00000622259 FNIP2Q9P278 1114 aa16.39■□□□□ 0.21
SNX12-206ENST00000622259 FBXW11Q9UKB1 542 aa16.39■□□□□ 0.21
SNX12-206ENST00000622259 NRG2O14511 850 aaPredicted RBP16.38■□□□□ 0.21
SNX12-206ENST00000622259 PSAPP07602 524 aa16.38■□□□□ 0.21
SNX12-206ENST00000622259 ZNF76P36508 570 aa16.38■□□□□ 0.21
SNX12-206ENST00000622259 SREBF1P36956 1147 aa16.38■□□□□ 0.21
SNX12-206ENST00000622259 CXCL12P48061 93 aa16.38■□□□□ 0.21
SNX12-206ENST00000622259 PPP2R5DQ14738 602 aa16.38■□□□□ 0.21
SNX12-206ENST00000622259 HEATR6Q6AI08 1181 aaKnown RBP16.38■□□□□ 0.21
SNX12-206ENST00000622259 RAB11FIP4Q86YS3 637 aa16.38■□□□□ 0.21
SNX12-206ENST00000622259 KSR1Q8IVT5 923 aa16.38■□□□□ 0.21
SNX12-206ENST00000622259 FAM167AQ96KS9 214 aa16.38■□□□□ 0.21
SNX12-206ENST00000622259 LZTS2Q9BRK4 669 aa16.38■□□□□ 0.21
SNX12-206ENST00000622259 ADAM33Q9BZ11 813 aa16.38■□□□□ 0.21
SNX12-206ENST00000622259 SMOC1Q9H4F8 434 aa16.38■□□□□ 0.21
SNX12-206ENST00000622259 C2orf42Q9NWW7 574 aa16.38■□□□□ 0.21
SNX12-206ENST00000622259 KANSL3Q9P2N6 904 aa16.38■□□□□ 0.21
SNX12-206ENST00000622259 ZBTB47Q9UFB7 747 aaPredicted RBP16.38■□□□□ 0.21
SNX12-206ENST00000622259 POLIQ9UNA4 740 aa16.38■□□□□ 0.21
SNX12-206ENST00000622259 PCDHA10Q9Y5I2 948 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms