RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 MIOSQ9NXC5 875 aa19.02■□□□□ 0.64
HMGN3-203ENST00000620514 KIAA1024Q9UPX6 916 aa19.02■□□□□ 0.64
HMGN3-203ENST00000620514 KIF3AQ9Y496 699 aa19.02■□□□□ 0.64
HMGN3-203ENST00000620514 TTLL13PA6NNM8 815 aa19.01■□□□□ 0.63
HMGN3-203ENST00000620514 CLASP2O75122 1294 aaKnown RBP19.01■□□□□ 0.63
HMGN3-203ENST00000620514 NPTXRO95502 500 aa19.01■□□□□ 0.63
HMGN3-203ENST00000620514 MUTP22033 750 aa19.01■□□□□ 0.63
HMGN3-203ENST00000620514 MLH1P40692 756 aa19.01■□□□□ 0.63
HMGN3-203ENST00000620514 MAPK8IP2Q13387 824 aaPredicted RBP19.01■□□□□ 0.63
HMGN3-203ENST00000620514 CDCA2Q69YH5 1023 aaPredicted RBP19.01■□□□□ 0.63
HMGN3-203ENST00000620514 ANKRD54Q6NXT1 300 aa19.01■□□□□ 0.63
HMGN3-203ENST00000620514 SYCE2Q6PIF2 218 aa19.01■□□□□ 0.63
HMGN3-203ENST00000620514 TMEM184AQ6ZMB5 413 aa19.01■□□□□ 0.63
HMGN3-203ENST00000620514 IGSF22Q8N9C0 903 aa19.01■□□□□ 0.63
HMGN3-203ENST00000620514 SNX29Q8TEQ0 813 aa19.01■□□□□ 0.63
HMGN3-203ENST00000620514 FAM193BQ96PV7 902 aaPredicted RBP19.01■□□□□ 0.63
HMGN3-203ENST00000620514 LRFN3Q9BTN0 628 aa19.01■□□□□ 0.63
HMGN3-203ENST00000620514 BHMT2Q9H2M3 363 aa19.01■□□□□ 0.63
HMGN3-203ENST00000620514 KANSL3Q9P2N6 904 aa19.01■□□□□ 0.63
HMGN3-203ENST00000620514 USP20Q9Y2K6 914 aa19.01■□□□□ 0.63
HMGN3-203ENST00000620514 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19■□□□□ 0.63
HMGN3-203ENST00000620514 FSD2A1L4K1 749 aa19■□□□□ 0.63
HMGN3-203ENST00000620514 ARL5CA6NH57 179 aa19■□□□□ 0.63
HMGN3-203ENST00000620514 CTSAP10619 480 aa19■□□□□ 0.63
HMGN3-203ENST00000620514 CDC25AP30304 524 aa19■□□□□ 0.63
HMGN3-203ENST00000620514 PDIA5Q14554 519 aa19■□□□□ 0.63
HMGN3-203ENST00000620514 TMEM31Q5JXX7 168 aa19■□□□□ 0.63
HMGN3-203ENST00000620514 ZFP42Q96MM3 310 aa19■□□□□ 0.63
HMGN3-203ENST00000620514 TRIM6Q9C030 488 aaPredicted RBP19■□□□□ 0.63
HMGN3-203ENST00000620514 S1PR5Q9H228 398 aa19■□□□□ 0.63
HMGN3-203ENST00000620514 FZD8Q9H461 694 aa19■□□□□ 0.63
HMGN3-203ENST00000620514 UBN1Q9NPG3 1134 aa19■□□□□ 0.63
HMGN3-203ENST00000620514 DDX19AQ9NUU7 478 aaKnown RBP19■□□□□ 0.63
HMGN3-203ENST00000620514 A0A1B0GUA9 196 aa18.99■□□□□ 0.63
HMGN3-203ENST00000620514 CARNS1A5YM72 827 aa18.99■□□□□ 0.63
HMGN3-203ENST00000620514 NRP1O14786 923 aa18.99■□□□□ 0.63
HMGN3-203ENST00000620514 INPPL1O15357 1258 aa18.99■□□□□ 0.63
HMGN3-203ENST00000620514 ALDH2P05091 517 aa18.99■□□□□ 0.63
HMGN3-203ENST00000620514 AKAP5P24588 427 aa18.99■□□□□ 0.63
HMGN3-203ENST00000620514 MCM2P49736 904 aa18.99■□□□□ 0.63
HMGN3-203ENST00000620514 SCNN1GP51170 649 aa18.99■□□□□ 0.63
HMGN3-203ENST00000620514 SLC27A1Q6PCB7 646 aa18.99■□□□□ 0.63
HMGN3-203ENST00000620514 ZBTB8OSQ8IWT0 167 aa18.99■□□□□ 0.63
HMGN3-203ENST00000620514 COLGALT2Q8IYK4 626 aa18.99■□□□□ 0.63
HMGN3-203ENST00000620514 SUSD6Q92537 303 aa18.99■□□□□ 0.63
HMGN3-203ENST00000620514 POP1Q99575 1024 aaKnown RBP18.99■□□□□ 0.63
HMGN3-203ENST00000620514 TMEM175Q9BSA9 504 aa18.99■□□□□ 0.63
HMGN3-203ENST00000620514 KIFC3Q9BVG8 833 aa18.99■□□□□ 0.63
HMGN3-203ENST00000620514 PRMT7Q9NVM4 692 aaPredicted RBP18.99■□□□□ 0.63
HMGN3-203ENST00000620514 FAN1Q9Y2M0 1017 aa18.99■□□□□ 0.63
HMGN3-203ENST00000620514 PRG3Q9Y2Y8 225 aaPredicted RBP18.99■□□□□ 0.63
HMGN3-203ENST00000620514 HCFC2Q9Y5Z7 792 aa18.99■□□□□ 0.63
HMGN3-203ENST00000620514 C5orf42Q9H799 3197 aa18.99■□□□□ 0.63
HMGN3-203ENST00000620514 E9PMD0 336 aa18.98■□□□□ 0.63
HMGN3-203ENST00000620514 H3BQV1 296 aa18.98■□□□□ 0.63
HMGN3-203ENST00000620514 GPR37L1O60883 481 aa18.98■□□□□ 0.63
HMGN3-203ENST00000620514 EDN1P05305 212 aa18.98■□□□□ 0.63
HMGN3-203ENST00000620514 SSBP05455 408 aaKnown RBP eCLIP18.98■□□□□ 0.63
HMGN3-203ENST00000620514 SRGAP2BP0DMP2 458 aa18.98■□□□□ 0.63
HMGN3-203ENST00000620514 LIG1P18858 919 aa18.98■□□□□ 0.63
HMGN3-203ENST00000620514 PRPHP41219 470 aa18.98■□□□□ 0.63
HMGN3-203ENST00000620514 MMTAG2Q9BU76 263 aaKnown RBP18.98■□□□□ 0.63
HMGN3-203ENST00000620514 RAB34Q9BZG1 259 aa18.98■□□□□ 0.63
HMGN3-203ENST00000620514 MARCH5Q9NX47 278 aa18.98■□□□□ 0.63
HMGN3-203ENST00000620514 KLK14Q9P0G3 267 aa18.98■□□□□ 0.63
HMGN3-203ENST00000620514 CDH22Q9UJ99 828 aa18.98■□□□□ 0.63
HMGN3-203ENST00000620514 SMC3Q9UQE7 1217 aa18.98■□□□□ 0.63
HMGN3-203ENST00000620514 GIT1Q9Y2X7 761 aa18.98■□□□□ 0.63
HMGN3-203ENST00000620514 F8W810 466 aa18.97■□□□□ 0.63
HMGN3-203ENST00000620514 LAD1O00515 517 aa18.97■□□□□ 0.63
HMGN3-203ENST00000620514 DCXO43602 365 aa18.97■□□□□ 0.63
HMGN3-203ENST00000620514 PRKCBP05771 671 aa18.97■□□□□ 0.63
HMGN3-203ENST00000620514 ALADP13716 330 aa18.97■□□□□ 0.63
HMGN3-203ENST00000620514 NAMPTP43490 491 aa18.97■□□□□ 0.63
HMGN3-203ENST00000620514 OR1G1P47890 313 aa18.97■□□□□ 0.63
HMGN3-203ENST00000620514 DSC1Q08554 894 aa18.97■□□□□ 0.63
HMGN3-203ENST00000620514 BMS1Q14692 1282 aaKnown RBP18.97■□□□□ 0.63
HMGN3-203ENST00000620514 PTPN14Q15678 1187 aa18.97■□□□□ 0.63
HMGN3-203ENST00000620514 FAM187BQ17R55 369 aa18.97■□□□□ 0.63
HMGN3-203ENST00000620514 RILPL1Q5EBL4 403 aa18.97■□□□□ 0.63
HMGN3-203ENST00000620514 KRT79Q5XKE5 535 aa18.97■□□□□ 0.63
HMGN3-203ENST00000620514 DTHD1Q6ZMT9 781 aa18.97■□□□□ 0.63
HMGN3-203ENST00000620514 KCNK18Q7Z418 384 aa18.97■□□□□ 0.63
HMGN3-203ENST00000620514 RNF135Q8IUD6 432 aa18.97■□□□□ 0.63
HMGN3-203ENST00000620514 GSTCDQ8NEC7 633 aa18.97■□□□□ 0.63
HMGN3-203ENST00000620514 DEPTORQ8TB45 409 aa18.97■□□□□ 0.63
HMGN3-203ENST00000620514 CASP10Q92851 521 aa18.97■□□□□ 0.63
HMGN3-203ENST00000620514 PRIMPOLQ96LW4 560 aa18.97■□□□□ 0.63
HMGN3-203ENST00000620514 PHF7Q9BWX1 381 aaPredicted RBP18.97■□□□□ 0.63
HMGN3-203ENST00000620514 CCDC113Q9H0I3 377 aa18.97■□□□□ 0.63
HMGN3-203ENST00000620514 C2orf40Q9H1Z8 148 aa18.97■□□□□ 0.63
HMGN3-203ENST00000620514 PDZD7Q9H5P4 517 aa18.97■□□□□ 0.63
HMGN3-203ENST00000620514 PARP2Q9UGN5 583 aa18.97■□□□□ 0.63
HMGN3-203ENST00000620514 IRAK3Q9Y616 596 aa18.97■□□□□ 0.63
HMGN3-203ENST00000620514 LOC730098B7Z3J9 87 aa18.96■□□□□ 0.63
HMGN3-203ENST00000620514 ATP2C1P98194 919 aaPredicted RBP18.96■□□□□ 0.63
HMGN3-203ENST00000620514 PRPF4BQ13523 1007 aaKnown RBP18.96■□□□□ 0.63
HMGN3-203ENST00000620514 EEF1DP3Q658K8 133 aa18.96■□□□□ 0.63
HMGN3-203ENST00000620514 HACE1Q8IYU2 909 aa18.96■□□□□ 0.63
HMGN3-203ENST00000620514 RPGRIP1Q96KN7 1286 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms