RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 A0A1W2PQ27 194 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 A0A1W2PQ64 194 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 A0A1W2PQD8 194 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 FRMD3A2A2Y4 597 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 DENND3A2RUS2 1198 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 B4GALT5O43286 388 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 ZNF623O75123 536 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 CA3P07451 260 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 PRR29P0C7W0 189 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 ATF7P17544 494 aaPredicted RBP5.78□□□□□ -1.48
SHMT1-211ENST00000618902 LIG1P18858 919 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 PPM1AP35813 382 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 NPTX2P47972 431 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 GATMP50440 423 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 ZNF131P52739 623 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 TAP1Q03518 808 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 MBTD1Q05BQ5 628 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 SNW1Q13573 536 aaKnown RBP5.78□□□□□ -1.48
SHMT1-211ENST00000618902 GIT2Q14161 759 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 TFDP1Q14186 410 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 SYCP1Q15431 976 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 LONRF3Q496Y0 759 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 TIGD5Q53EQ6 642 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 UBXN11Q5T124 520 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 NT5DC1Q5TFE4 455 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 RRAGBQ5VZM2 374 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 CDCA2Q69YH5 1023 aaPredicted RBP5.78□□□□□ -1.48
SHMT1-211ENST00000618902 APBB1IPQ7Z5R6 666 aaPredicted RBP5.78□□□□□ -1.48
SHMT1-211ENST00000618902 SPRED2Q7Z698 418 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 PDCL2Q8N4E4 241 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 RNF149Q8NC42 400 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 GLIS3Q8NEA6 775 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 ENGASEQ8NFI3 743 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 PSPC1Q8WXF1 523 aaKnown RBP5.78□□□□□ -1.48
SHMT1-211ENST00000618902 LARP4BQ92615 738 aaKnown RBP5.78□□□□□ -1.48
SHMT1-211ENST00000618902 KCNN1Q92952 543 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 HPS3Q969F9 1004 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 DHX58Q96C10 678 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 ZNF689Q96CS4 500 aaPredicted RBP5.78□□□□□ -1.48
SHMT1-211ENST00000618902 NLRP4Q96MN2 994 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 FUCA2Q9BTY2 467 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 MRPL9Q9BYD2 267 aaKnown RBP5.78□□□□□ -1.48
SHMT1-211ENST00000618902 NAT10Q9H0A0 1025 aaKnown RBP5.78□□□□□ -1.48
SHMT1-211ENST00000618902 CCDC113Q9H0I3 377 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 NT5C3AQ9H0P0 336 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 IKZF4Q9H2S9 585 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 SPTLC3Q9NUV7 552 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 RNF19AQ9NV58 838 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 KBTBD4Q9NVX7 518 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 TMEM161AQ9NX61 479 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 KANSL3Q9P2N6 904 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 STK17AQ9UEE5 414 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 SERTAD1Q9UHV2 236 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 KCNH3Q9ULD8 1083 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 FAM50BQ9Y247 325 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 LZTS1Q9Y250 596 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 PAXBP1Q9Y5B6 917 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 C5orf42Q9H799 3197 aa5.78□□□□□ -1.48
SHMT1-211ENST00000618902 CNTNAP2Q9UHC6 1331 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 MYH11P35749 1972 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.77□□□□□ -1.49
SHMT1-211ENST00000618902 LCHNA4D1U4 455 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 LRRIQ4A6NIV6 560 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 MEIS3P2A8K0S8 358 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 C9IYK1 514 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 H3BNC9 293 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 KIF2AO00139 706 aaPredicted RBP5.77□□□□□ -1.49
SHMT1-211ENST00000618902 ABLIM1O14639 778 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 SLC16A4O15374 487 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 NRDCO43847 1150 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 KLRC4O43908 158 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 TSPAN1O60635 241 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 DGKIO75912 1065 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 ADCY5O95622 1261 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 MYOGP15173 224 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 CDC25BP30305 580 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 NMT1P30419 496 aaKnown RBP5.77□□□□□ -1.49
SHMT1-211ENST00000618902 PBX2P40425 430 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 STAT6P42226 847 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 EFNA5P52803 228 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 RABGGTBP53611 331 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 PEX3P56589 373 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 NFX1Q12986 1120 aaKnown RBP5.77□□□□□ -1.49
SHMT1-211ENST00000618902 CUL4BQ13620 913 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 GRIN2CQ14957 1233 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 PPP2R5AQ15172 486 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 EEF1DP3Q658K8 133 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 CCDC73Q6ZRK6 1079 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 SV2BQ7L1I2 683 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 DYMQ7RTS9 669 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 ZNF598Q86UK7 904 aaKnown RBP5.77□□□□□ -1.49
SHMT1-211ENST00000618902 CDR2LQ86X02 465 aaPredicted RBP5.77□□□□□ -1.49
SHMT1-211ENST00000618902 SFR1Q86XK3 245 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 GPR65Q8IYL9 337 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 HACE1Q8IYU2 909 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 MYOCDQ8IZQ8 938 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 FMR1NBQ8N0W7 255 aaPredicted RBP5.77□□□□□ -1.49
SHMT1-211ENST00000618902 FIBCD1Q8N539 461 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 SLC17A8Q8NDX2 589 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 TMEM161BQ8NDZ6 487 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms