RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 PARP2Q9UGN5 583 aa21.96■■□□□ 1.11
NEK3-208ENST00000618534 K7ENM7 598 aa21.95■■□□□ 1.1
NEK3-208ENST00000618534 RIPK2O43353 540 aa21.95■■□□□ 1.1
NEK3-208ENST00000618534 GBP1P32455 592 aa21.95■■□□□ 1.1
NEK3-208ENST00000618534 GCLMP48507 274 aa21.95■■□□□ 1.1
NEK3-208ENST00000618534 MAEAQ7L5Y9 396 aa21.95■■□□□ 1.1
NEK3-208ENST00000618534 ANKS4BQ8N8V4 417 aa21.95■■□□□ 1.1
NEK3-208ENST00000618534 SCLT1Q96NL6 688 aa21.95■■□□□ 1.1
NEK3-208ENST00000618534 RPS6KC1Q96S38 1066 aa21.95■■□□□ 1.1
NEK3-208ENST00000618534 LXNQ9BS40 222 aa21.95■■□□□ 1.1
NEK3-208ENST00000618534 ARHGEF35A5YM69 484 aa21.95■■□□□ 1.1
NEK3-208ENST00000618534 IFNAR2P48551 515 aa21.95■■□□□ 1.1
NEK3-208ENST00000618534 RRP1BQ14684 758 aaKnown RBP21.95■■□□□ 1.1
NEK3-208ENST00000618534 TAX1BP1Q86VP1 789 aa21.95■■□□□ 1.1
NEK3-208ENST00000618534 CXorf56Q9H5V9 222 aa21.95■■□□□ 1.1
NEK3-208ENST00000618534 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.95■■□□□ 1.1
NEK3-208ENST00000618534 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.95■■□□□ 1.1
NEK3-208ENST00000618534 KCND2Q9NZV8 630 aa21.95■■□□□ 1.1
NEK3-208ENST00000618534 SPATA31A6Q5VVP1 1343 aa21.94■■□□□ 1.1
NEK3-208ENST00000618534 ANKRD31Q8N7Z5 1873 aa21.94■■□□□ 1.1
NEK3-208ENST00000618534 RTN2O75298 545 aa21.94■■□□□ 1.1
NEK3-208ENST00000618534 SGPL1O95470 568 aa21.94■■□□□ 1.1
NEK3-208ENST00000618534 GGPS1O95749 300 aa21.94■■□□□ 1.1
NEK3-208ENST00000618534 ARP10275 920 aa21.94■■□□□ 1.1
NEK3-208ENST00000618534 VAMP7P51809 220 aa21.94■■□□□ 1.1
NEK3-208ENST00000618534 CCDC38Q502W7 563 aa21.94■■□□□ 1.1
NEK3-208ENST00000618534 CCDC105Q8IYK2 499 aa21.94■■□□□ 1.1
NEK3-208ENST00000618534 CD101Q93033 1021 aa21.94■■□□□ 1.1
NEK3-208ENST00000618534 BTBD6Q96KE9 485 aa21.94■■□□□ 1.1
NEK3-208ENST00000618534 ELAC2Q9BQ52 826 aaKnown RBP21.94■■□□□ 1.1
NEK3-208ENST00000618534 ZNF577Q9BSK1 485 aa21.94■■□□□ 1.1
NEK3-208ENST00000618534 TMEM109Q9BVC6 243 aa21.94■■□□□ 1.1
NEK3-208ENST00000618534 CCDC113Q9H0I3 377 aa21.94■■□□□ 1.1
NEK3-208ENST00000618534 IBSPP21815 317 aaPredicted RBP21.94■■□□□ 1.1
NEK3-208ENST00000618534 COILP38432 576 aaPredicted RBP21.94■■□□□ 1.1
NEK3-208ENST00000618534 KCNJ1P48048 391 aa21.94■■□□□ 1.1
NEK3-208ENST00000618534 AUHQ13825 339 aaKnown RBP21.94■■□□□ 1.1
NEK3-208ENST00000618534 ITIH4Q14624 930 aa21.94■■□□□ 1.1
NEK3-208ENST00000618534 EPC2Q52LR7 807 aa21.94■■□□□ 1.1
NEK3-208ENST00000618534 WLSQ5T9L3 541 aa21.94■■□□□ 1.1
NEK3-208ENST00000618534 CEP57Q86XR8 500 aa21.94■■□□□ 1.1
NEK3-208ENST00000618534 CCDC50Q8IVM0 306 aa21.94■■□□□ 1.1
NEK3-208ENST00000618534 ACP6Q9NPH0 428 aa21.94■■□□□ 1.1
NEK3-208ENST00000618534 DBR1Q9UK59 544 aaKnown RBP21.94■■□□□ 1.1
NEK3-208ENST00000618534 RASGRF2O14827 1237 aa21.93■■□□□ 1.1
NEK3-208ENST00000618534 VIMP08670 466 aaKnown RBP21.93■■□□□ 1.1
NEK3-208ENST00000618534 CHRNB2P17787 502 aa21.93■■□□□ 1.1
NEK3-208ENST00000618534 C1orf220Q5T0J3 134 aa21.93■■□□□ 1.1
NEK3-208ENST00000618534 MSL1Q68DK7 614 aa21.93■■□□□ 1.1
NEK3-208ENST00000618534 CCDC174Q6PII3 467 aa21.93■■□□□ 1.1
NEK3-208ENST00000618534 INTS8Q75QN2 995 aaKnown RBP21.93■■□□□ 1.1
NEK3-208ENST00000618534 NOP9Q86U38 636 aaKnown RBP21.93■■□□□ 1.1
NEK3-208ENST00000618534 CCDC25Q86WR0 208 aa21.93■■□□□ 1.1
NEK3-208ENST00000618534 SLC13A5Q86YT5 568 aaPredicted RBP21.93■■□□□ 1.1
NEK3-208ENST00000618534 WNT8AQ9H1J5 351 aa21.93■■□□□ 1.1
NEK3-208ENST00000618534 CCDC134Q9H6E4 229 aa21.93■■□□□ 1.1
NEK3-208ENST00000618534 POLR2MP0CAP2 368 aa21.92■■□□□ 1.1
NEK3-208ENST00000618534 RARAP10276 462 aa21.92■■□□□ 1.1
NEK3-208ENST00000618534 RARGP13631 454 aa21.92■■□□□ 1.1
NEK3-208ENST00000618534 SLMAPQ14BN4 828 aa21.92■■□□□ 1.1
NEK3-208ENST00000618534 SIX1Q15475 284 aaPredicted RBP21.92■■□□□ 1.1
NEK3-208ENST00000618534 CYP1B1Q16678 543 aa21.92■■□□□ 1.1
NEK3-208ENST00000618534 CEP55Q53EZ4 464 aa21.92■■□□□ 1.1
NEK3-208ENST00000618534 TNFAIP8L3Q5GJ75 292 aa21.92■■□□□ 1.1
NEK3-208ENST00000618534 CROCCP2Q86T23 111 aa21.92■■□□□ 1.1
NEK3-208ENST00000618534 ZSWIM2Q8NEG5 633 aa21.92■■□□□ 1.1
NEK3-208ENST00000618534 EPS8L1Q8TE68 723 aa21.92■■□□□ 1.1
NEK3-208ENST00000618534 ART4Q93070 314 aa21.92■■□□□ 1.1
NEK3-208ENST00000618534 CBWD1Q9BRT8 395 aa21.92■■□□□ 1.1
NEK3-208ENST00000618534 SAMD15Q9P1V8 674 aa21.92■■□□□ 1.1
NEK3-208ENST00000618534 MCM8Q9UJA3 840 aa21.92■■□□□ 1.1
NEK3-208ENST00000618534 NOCTQ9UK39 431 aaKnown RBP21.92■■□□□ 1.1
NEK3-208ENST00000618534 SLC12A4Q9UP95 1085 aa21.92■■□□□ 1.1
NEK3-208ENST00000618534 MGRN1O60291 552 aa21.92■■□□□ 1.1
NEK3-208ENST00000618534 MUTP22033 750 aa21.92■■□□□ 1.1
NEK3-208ENST00000618534 STAT2P52630 851 aa21.92■■□□□ 1.1
NEK3-208ENST00000618534 CETN1Q12798 172 aa21.92■■□□□ 1.1
NEK3-208ENST00000618534 MYBPC2Q14324 1141 aa21.92■■□□□ 1.1
NEK3-208ENST00000618534 RBM26Q5T8P6 1007 aaKnown RBP21.92■■□□□ 1.1
NEK3-208ENST00000618534 PLEKHO2Q8TD55 490 aa21.92■■□□□ 1.1
NEK3-208ENST00000618534 USP21Q9UK80 565 aa21.92■■□□□ 1.1
NEK3-208ENST00000618534 SPOPO43791 374 aa21.91■■□□□ 1.1
NEK3-208ENST00000618534 MTA2O94776 668 aa21.91■■□□□ 1.1
NEK3-208ENST00000618534 ECE1P42892 770 aa21.91■■□□□ 1.1
NEK3-208ENST00000618534 ELF3P78545 371 aaPredicted RBP21.91■■□□□ 1.1
NEK3-208ENST00000618534 MKRN4PQ13434 485 aaPredicted RBP21.91■■□□□ 1.1
NEK3-208ENST00000618534 NEDD9Q14511 834 aa21.91■■□□□ 1.1
NEK3-208ENST00000618534 CNGA2Q16280 664 aa21.91■■□□□ 1.1
NEK3-208ENST00000618534 WDR11Q9BZH6 1224 aa21.91■■□□□ 1.1
NEK3-208ENST00000618534 MTUS1Q9ULD2 1270 aa21.91■■□□□ 1.1
NEK3-208ENST00000618534 PASKQ96RG2 1323 aa21.91■■□□□ 1.1
NEK3-208ENST00000618534 DDX39AO00148 427 aaKnown RBP21.91■■□□□ 1.1
NEK3-208ENST00000618534 PPP1R7Q15435 360 aa21.91■■□□□ 1.1
NEK3-208ENST00000618534 HIBCHQ6NVY1 386 aaPredicted RBP21.91■■□□□ 1.1
NEK3-208ENST00000618534 ZNF564Q8TBZ8 553 aaPredicted RBP21.91■■□□□ 1.1
NEK3-208ENST00000618534 POP1Q99575 1024 aaKnown RBP21.91■■□□□ 1.1
NEK3-208ENST00000618534 NUP85Q9BW27 656 aa21.91■■□□□ 1.1
NEK3-208ENST00000618534 STMN4Q9H169 189 aaPredicted RBP21.91■■□□□ 1.1
NEK3-208ENST00000618534 LLGL1Q15334 1064 aa21.9■■□□□ 1.1
NEK3-208ENST00000618534 PADI6Q6TGC4 694 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms