RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 OTOP2Q7RTS6 562 aa17.12■□□□□ 0.33
PCDHGC3-204ENST00000617222 LINC01599Q8WXQ3 324 aa17.12■□□□□ 0.33
PCDHGC3-204ENST00000617222 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.12■□□□□ 0.33
PCDHGC3-204ENST00000617222 TCHPQ9BT92 498 aa17.12■□□□□ 0.33
PCDHGC3-204ENST00000617222 PDZD7Q9H5P4 517 aa17.12■□□□□ 0.33
PCDHGC3-204ENST00000617222 TNFSF13BQ9Y275 285 aa17.12■□□□□ 0.33
PCDHGC3-204ENST00000617222 UBE4BO95155 1302 aa17.12■□□□□ 0.33
PCDHGC3-204ENST00000617222 ABHD14A-ACY1A0A1B0GW23 586 aa17.11■□□□□ 0.33
PCDHGC3-204ENST00000617222 TISP43B9A030 160 aa17.11■□□□□ 0.33
PCDHGC3-204ENST00000617222 KIF20AO95235 890 aa17.11■□□□□ 0.33
PCDHGC3-204ENST00000617222 IBSPP21815 317 aaPredicted RBP17.11■□□□□ 0.33
PCDHGC3-204ENST00000617222 NLRP12P59046 1061 aa17.11■□□□□ 0.33
PCDHGC3-204ENST00000617222 UBXN11Q5T124 520 aa17.11■□□□□ 0.33
PCDHGC3-204ENST00000617222 SLC39A4Q6P5W5 647 aa17.11■□□□□ 0.33
PCDHGC3-204ENST00000617222 PSRC1Q6PGN9 363 aaPredicted RBP17.11■□□□□ 0.33
PCDHGC3-204ENST00000617222 SASS6Q6UVJ0 657 aa17.11■□□□□ 0.33
PCDHGC3-204ENST00000617222 FAM43BQ6ZT52 329 aaPredicted RBP17.11■□□□□ 0.33
PCDHGC3-204ENST00000617222 ZBTB33Q86T24 672 aa17.11■□□□□ 0.33
PCDHGC3-204ENST00000617222 GUF1Q8N442 669 aaKnown RBP17.11■□□□□ 0.33
PCDHGC3-204ENST00000617222 CCDC51Q96ER9 411 aa17.11■□□□□ 0.33
PCDHGC3-204ENST00000617222 TSPYL2Q9H2G4 693 aaPredicted RBP17.11■□□□□ 0.33
PCDHGC3-204ENST00000617222 PTPRHQ9HD43 1115 aa17.11■□□□□ 0.33
PCDHGC3-204ENST00000617222 RGS18Q9NS28 235 aa17.11■□□□□ 0.33
PCDHGC3-204ENST00000617222 SCN5AQ14524 2016 aa17.11■□□□□ 0.33
PCDHGC3-204ENST00000617222 TET1Q8NFU7 2136 aa17.11■□□□□ 0.33
PCDHGC3-204ENST00000617222 PPP1R3GB7ZBB8 358 aa17.1■□□□□ 0.33
PCDHGC3-204ENST00000617222 TGFB1I1O43294 461 aa17.1■□□□□ 0.33
PCDHGC3-204ENST00000617222 TOM1L1O75674 476 aa17.1■□□□□ 0.33
PCDHGC3-204ENST00000617222 LETM1O95202 739 aaPredicted RBP17.1■□□□□ 0.33
PCDHGC3-204ENST00000617222 NPTXRO95502 500 aa17.1■□□□□ 0.33
PCDHGC3-204ENST00000617222 CD44P16070 742 aaKnown RBP17.1■□□□□ 0.33
PCDHGC3-204ENST00000617222 MATR3P43243 847 aaKnown RBP eCLIP17.1■□□□□ 0.33
PCDHGC3-204ENST00000617222 COBLL1Q53SF7 1204 aa17.1■□□□□ 0.33
PCDHGC3-204ENST00000617222 SLC27A1Q6PCB7 646 aa17.1■□□□□ 0.33
PCDHGC3-204ENST00000617222 MPZL3Q6UWV2 235 aa17.1■□□□□ 0.33
PCDHGC3-204ENST00000617222 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.1■□□□□ 0.33
PCDHGC3-204ENST00000617222 ADSSL1Q8N142 457 aa17.1■□□□□ 0.33
PCDHGC3-204ENST00000617222 GDF15Q99988 308 aa17.1■□□□□ 0.33
PCDHGC3-204ENST00000617222 ADPGKQ9BRR6 497 aa17.1■□□□□ 0.33
PCDHGC3-204ENST00000617222 EIF2AQ9BY44 585 aaKnown RBP17.1■□□□□ 0.33
PCDHGC3-204ENST00000617222 GBP3Q9H0R5 595 aa17.1■□□□□ 0.33
PCDHGC3-204ENST00000617222 C1orf112Q9NSG2 853 aa17.1■□□□□ 0.33
PCDHGC3-204ENST00000617222 ANKFY1Q9P2R3 1169 aa17.1■□□□□ 0.33
PCDHGC3-204ENST00000617222 SIP14410 1827 aa17.1■□□□□ 0.33
PCDHGC3-204ENST00000617222 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.09■□□□□ 0.33
PCDHGC3-204ENST00000617222 ZBBXA8MT70 800 aa17.09■□□□□ 0.33
PCDHGC3-204ENST00000617222 C9IYK1 514 aa17.09■□□□□ 0.33
PCDHGC3-204ENST00000617222 ABLIM1O14639 778 aa17.09■□□□□ 0.33
PCDHGC3-204ENST00000617222 CLDN3O15551 220 aa17.09■□□□□ 0.33
PCDHGC3-204ENST00000617222 BAIAP3O94812 1187 aa17.09■□□□□ 0.33
PCDHGC3-204ENST00000617222 HARSP12081 509 aaKnown RBP17.09■□□□□ 0.33
PCDHGC3-204ENST00000617222 PROZP22891 400 aa17.09■□□□□ 0.33
PCDHGC3-204ENST00000617222 STIM1Q13586 685 aa17.09■□□□□ 0.33
PCDHGC3-204ENST00000617222 ZNF568Q3ZCX4 644 aa17.09■□□□□ 0.33
PCDHGC3-204ENST00000617222 SLFN12LQ6IEE8 588 aa17.09■□□□□ 0.33
PCDHGC3-204ENST00000617222 KLHL10Q6JEL2 608 aa17.09■□□□□ 0.33
PCDHGC3-204ENST00000617222 SLC24A5Q71RS6 500 aa17.09■□□□□ 0.33
PCDHGC3-204ENST00000617222 HERVK_113Q902F9 699 aa17.09■□□□□ 0.33
PCDHGC3-204ENST00000617222 TRIM6Q9C030 488 aaPredicted RBP17.09■□□□□ 0.33
PCDHGC3-204ENST00000617222 UBE2OQ9C0C9 1292 aaKnown RBP17.09■□□□□ 0.33
PCDHGC3-204ENST00000617222 HAPLN2Q9GZV7 340 aa17.09■□□□□ 0.33
PCDHGC3-204ENST00000617222 CDT1Q9H211 546 aa17.09■□□□□ 0.33
PCDHGC3-204ENST00000617222 KCTD10Q9H3F6 313 aa17.09■□□□□ 0.33
PCDHGC3-204ENST00000617222 FAM105AQ9NUU6 356 aa17.09■□□□□ 0.33
PCDHGC3-204ENST00000617222 PCDHB2Q9Y5E7 798 aa17.09■□□□□ 0.33
PCDHGC3-204ENST00000617222 ZMYM2Q9UBW7 1377 aa17.09■□□□□ 0.33
PCDHGC3-204ENST00000617222 TANC1Q9C0D5 1861 aa17.09■□□□□ 0.33
PCDHGC3-204ENST00000617222 A0A0U1RQF3 1178 aa17.08■□□□□ 0.32
PCDHGC3-204ENST00000617222 CLIC2O15247 247 aa17.08■□□□□ 0.32
PCDHGC3-204ENST00000617222 EFCAB14O75071 495 aa17.08■□□□□ 0.32
PCDHGC3-204ENST00000617222 MCF2P10911 925 aa17.08■□□□□ 0.32
PCDHGC3-204ENST00000617222 ADSSP30520 456 aa17.08■□□□□ 0.32
PCDHGC3-204ENST00000617222 FAM189BP81408 668 aa17.08■□□□□ 0.32
PCDHGC3-204ENST00000617222 MCL1Q07820 350 aa17.08■□□□□ 0.32
PCDHGC3-204ENST00000617222 DCAF4L1Q3SXM0 396 aa17.08■□□□□ 0.32
PCDHGC3-204ENST00000617222 HS2ST1Q7LGA3 356 aa17.08■□□□□ 0.32
PCDHGC3-204ENST00000617222 APBB1IPQ7Z5R6 666 aaPredicted RBP17.08■□□□□ 0.32
PCDHGC3-204ENST00000617222 ECHDC2Q86YB7 292 aa17.08■□□□□ 0.32
PCDHGC3-204ENST00000617222 MLKLQ8NB16 471 aa17.08■□□□□ 0.32
PCDHGC3-204ENST00000617222 POMGNT1Q8WZA1 660 aa17.08■□□□□ 0.32
PCDHGC3-204ENST00000617222 DHTKD1Q96HY7 919 aaPredicted RBP17.08■□□□□ 0.32
PCDHGC3-204ENST00000617222 TRAIPQ9BWF2 469 aa17.08■□□□□ 0.32
PCDHGC3-204ENST00000617222 SEMA6BQ9H3T3 888 aa17.08■□□□□ 0.32
PCDHGC3-204ENST00000617222 PCIF1Q9H4Z3 704 aa17.08■□□□□ 0.32
PCDHGC3-204ENST00000617222 TYW1Q9NV66 732 aaKnown RBP17.08■□□□□ 0.32
PCDHGC3-204ENST00000617222 STYXL1Q9Y6J8 313 aa17.08■□□□□ 0.32
PCDHGC3-204ENST00000617222 A0A0B4J269 797 aa17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 SYCE3A1L190 88 aa17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 PDXKO00764 312 aa17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 PSMA7O14818 248 aa17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 ZNF623O75123 536 aa17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 PPP1R2P41236 205 aa17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 KCNJ6P48051 423 aa17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 RAB27AP51159 221 aa17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 WDR5P61964 334 aaKnown RBP17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 SNRPFP62306 86 aaKnown RBP17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 NOLC1Q14978 699 aaKnown RBP eCLIP17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 SHHQ15465 462 aa17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 DPCR1Q3MIW9 517 aa17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 ZSCAN23Q3MJ62 389 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms