RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 FSD2A1L4K1 749 aa12.74□□□□□ -0.37
TARDBP-217ENST00000616545 TRIM49BA6NDI0 452 aa12.74□□□□□ -0.37
TARDBP-217ENST00000616545 CLDN3O15551 220 aa12.74□□□□□ -0.37
TARDBP-217ENST00000616545 PQBP1O60828 265 aaKnown RBP12.74□□□□□ -0.37
TARDBP-217ENST00000616545 RPS6KA5O75582 802 aa12.74□□□□□ -0.37
TARDBP-217ENST00000616545 PROZP22891 400 aa12.74□□□□□ -0.37
TARDBP-217ENST00000616545 ATN1P54259 1190 aaPredicted RBP12.74□□□□□ -0.37
TARDBP-217ENST00000616545 PMS1P54277 932 aaKnown RBP12.74□□□□□ -0.37
TARDBP-217ENST00000616545 MARSP56192 900 aaKnown RBP12.74□□□□□ -0.37
TARDBP-217ENST00000616545 TLE2Q04725 743 aa12.74□□□□□ -0.37
TARDBP-217ENST00000616545 MCL1Q07820 350 aa12.74□□□□□ -0.37
TARDBP-217ENST00000616545 TMEM62Q0P6H9 643 aa12.74□□□□□ -0.37
TARDBP-217ENST00000616545 AMHR2Q16671 573 aa12.74□□□□□ -0.37
TARDBP-217ENST00000616545 TMEM132AQ24JP5 1023 aa12.74□□□□□ -0.37
TARDBP-217ENST00000616545 DCAF4L1Q3SXM0 396 aa12.74□□□□□ -0.37
TARDBP-217ENST00000616545 TRIM60Q495X7 471 aa12.74□□□□□ -0.37
TARDBP-217ENST00000616545 ZNF618Q5T7W0 954 aa12.74□□□□□ -0.37
TARDBP-217ENST00000616545 ATF7IP2Q5U623 682 aa12.74□□□□□ -0.37
TARDBP-217ENST00000616545 NOTUMQ6P988 496 aa12.74□□□□□ -0.37
TARDBP-217ENST00000616545 MPZL3Q6UWV2 235 aa12.74□□□□□ -0.37
TARDBP-217ENST00000616545 LRRC55Q6ZSA7 311 aa12.74□□□□□ -0.37
TARDBP-217ENST00000616545 LRRC8DQ7L1W4 858 aa12.74□□□□□ -0.37
TARDBP-217ENST00000616545 USP37Q86T82 979 aa12.74□□□□□ -0.37
TARDBP-217ENST00000616545 XXYLT1Q8NBI6 393 aa12.74□□□□□ -0.37
TARDBP-217ENST00000616545 DIS3LQ8TF46 1054 aaKnown RBP12.74□□□□□ -0.37
TARDBP-217ENST00000616545 POMGNT1Q8WZA1 660 aa12.74□□□□□ -0.37
TARDBP-217ENST00000616545 TARS2Q9BW92 718 aaKnown RBP12.74□□□□□ -0.37
TARDBP-217ENST00000616545 SRRTQ9BXP5 876 aaKnown RBP12.74□□□□□ -0.37
TARDBP-217ENST00000616545 MINDY3Q9H8M7 445 aa12.74□□□□□ -0.37
TARDBP-217ENST00000616545 PTPRHQ9HD43 1115 aa12.74□□□□□ -0.37
TARDBP-217ENST00000616545 AGPAT5Q9NUQ2 364 aa12.74□□□□□ -0.37
TARDBP-217ENST00000616545 TRIP12Q14669 1992 aaPredicted RBP12.74□□□□□ -0.37
TARDBP-217ENST00000616545 A0A0B4J269 797 aa12.73□□□□□ -0.37
TARDBP-217ENST00000616545 TSPAN1O60635 241 aa12.73□□□□□ -0.37
TARDBP-217ENST00000616545 EXOC3O60645 756 aa12.73□□□□□ -0.37
TARDBP-217ENST00000616545 TPM2P07951 284 aa12.73□□□□□ -0.37
TARDBP-217ENST00000616545 CLTBP09497 229 aa12.73□□□□□ -0.37
TARDBP-217ENST00000616545 IQCF3P0C7M6 154 aa12.73□□□□□ -0.37
TARDBP-217ENST00000616545 MCF2P10911 925 aa12.73□□□□□ -0.37
TARDBP-217ENST00000616545 EPB41P11171 864 aaKnown RBP12.73□□□□□ -0.37
TARDBP-217ENST00000616545 ZNF18P17022 549 aa12.73□□□□□ -0.37
TARDBP-217ENST00000616545 ARF4P18085 180 aaPredicted RBP12.73□□□□□ -0.37
TARDBP-217ENST00000616545 RFC2P35250 354 aa12.73□□□□□ -0.37
TARDBP-217ENST00000616545 PSMC2P35998 433 aaKnown RBP12.73□□□□□ -0.37
TARDBP-217ENST00000616545 PPP2R3AQ06190 1150 aa12.73□□□□□ -0.37
TARDBP-217ENST00000616545 FAAP100Q0VG06 881 aa12.73□□□□□ -0.37
TARDBP-217ENST00000616545 FBXO47Q5MNV8 452 aa12.73□□□□□ -0.37
TARDBP-217ENST00000616545 CDKAL1Q5VV42 579 aa12.73□□□□□ -0.37
TARDBP-217ENST00000616545 FRMD5Q7Z6J6 570 aa12.73□□□□□ -0.37
TARDBP-217ENST00000616545 RNF214Q8ND24 703 aa12.73□□□□□ -0.37
TARDBP-217ENST00000616545 WNT8BQ93098 351 aa12.73□□□□□ -0.37
TARDBP-217ENST00000616545 FBXL18Q96ME1 805 aa12.73□□□□□ -0.37
TARDBP-217ENST00000616545 TCHPQ9BT92 498 aa12.73□□□□□ -0.37
TARDBP-217ENST00000616545 NOC4LQ9BVI4 516 aaKnown RBP12.73□□□□□ -0.37
TARDBP-217ENST00000616545 TRAIPQ9BWF2 469 aa12.73□□□□□ -0.37
TARDBP-217ENST00000616545 CDHR5Q9HBB8 845 aa12.73□□□□□ -0.37
TARDBP-217ENST00000616545 FANCLQ9NW38 375 aa12.73□□□□□ -0.37
TARDBP-217ENST00000616545 HSPBP1Q9NZL4 362 aa12.73□□□□□ -0.37
TARDBP-217ENST00000616545 AGO2Q9UKV8 859 aaKnown RBP12.73□□□□□ -0.37
TARDBP-217ENST00000616545 SIP14410 1827 aa12.73□□□□□ -0.37
TARDBP-217ENST00000616545 KIAA0100Q14667 2235 aaKnown RBP12.73□□□□□ -0.37
TARDBP-217ENST00000616545 LRRC10BA6NIK2 292 aa12.72□□□□□ -0.37
TARDBP-217ENST00000616545 ANKRD63C9JTQ0 380 aa12.72□□□□□ -0.37
TARDBP-217ENST00000616545 OGTO15294 1046 aa12.72□□□□□ -0.37
TARDBP-217ENST00000616545 EXTL3O43909 919 aa12.72□□□□□ -0.37
TARDBP-217ENST00000616545 SKIP12755 728 aa12.72□□□□□ -0.37
TARDBP-217ENST00000616545 EN2P19622 333 aaPredicted RBP12.72□□□□□ -0.37
TARDBP-217ENST00000616545 CDK11BP21127 795 aaKnown RBP12.72□□□□□ -0.37
TARDBP-217ENST00000616545 ADSSP30520 456 aa12.72□□□□□ -0.37
TARDBP-217ENST00000616545 MRE11P49959 708 aa12.72□□□□□ -0.37
TARDBP-217ENST00000616545 MCCD1P59942 119 aaPredicted RBP12.72□□□□□ -0.37
TARDBP-217ENST00000616545 PAK2Q13177 524 aa12.72□□□□□ -0.37
TARDBP-217ENST00000616545 NOLC1Q14978 699 aaKnown RBP eCLIP12.72□□□□□ -0.37
TARDBP-217ENST00000616545 SLC39A4Q6P5W5 647 aa12.72□□□□□ -0.37
TARDBP-217ENST00000616545 SLC27A1Q6PCB7 646 aa12.72□□□□□ -0.37
TARDBP-217ENST00000616545 INTS8Q75QN2 995 aaKnown RBP12.72□□□□□ -0.37
TARDBP-217ENST00000616545 GPD1LQ8N335 351 aa12.72□□□□□ -0.37
TARDBP-217ENST00000616545 TMEM40Q8WWA1 233 aa12.72□□□□□ -0.37
TARDBP-217ENST00000616545 APBB2Q92870 758 aa12.72□□□□□ -0.37
TARDBP-217ENST00000616545 ZNF668Q96K58 619 aaPredicted RBP12.72□□□□□ -0.37
TARDBP-217ENST00000616545 PPP1R16BQ96T49 567 aa12.72□□□□□ -0.37
TARDBP-217ENST00000616545 FTHL17Q9BXU8 183 aa12.72□□□□□ -0.37
TARDBP-217ENST00000616545 HIPK3Q9H422 1215 aa12.72□□□□□ -0.37
TARDBP-217ENST00000616545 TBX21Q9UL17 535 aa12.72□□□□□ -0.37
TARDBP-217ENST00000616545 ST3GAL5Q9UNP4 418 aa12.72□□□□□ -0.37
TARDBP-217ENST00000616545 ATP11BQ9Y2G3 1177 aa12.72□□□□□ -0.37
TARDBP-217ENST00000616545 NOC2LQ9Y3T9 749 aaKnown RBP12.72□□□□□ -0.37
TARDBP-217ENST00000616545 HTTP42858 3142 aa12.71□□□□□ -0.37
TARDBP-217ENST00000616545 ZNF233A6NK53 670 aa12.71□□□□□ -0.37
TARDBP-217ENST00000616545 ABLIM1O14639 778 aa12.71□□□□□ -0.37
TARDBP-217ENST00000616545 KIAA0355O15063 1070 aa12.71□□□□□ -0.37
TARDBP-217ENST00000616545 CLIC2O15247 247 aa12.71□□□□□ -0.37
TARDBP-217ENST00000616545 TPM3P06753 285 aa12.71□□□□□ -0.37
TARDBP-217ENST00000616545 CTSHP09668 335 aa12.71□□□□□ -0.37
TARDBP-217ENST00000616545 ZSCAN20P17040 1043 aaPredicted RBP12.71□□□□□ -0.37
TARDBP-217ENST00000616545 HOXA11P31270 313 aaPredicted RBP12.71□□□□□ -0.37
TARDBP-217ENST00000616545 MATR3P43243 847 aaKnown RBP eCLIP12.71□□□□□ -0.37
TARDBP-217ENST00000616545 RAB27AP51159 221 aa12.71□□□□□ -0.37
TARDBP-217ENST00000616545 LPIN1Q14693 890 aa12.71□□□□□ -0.37
TARDBP-217ENST00000616545 SURF1Q15526 300 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms